RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 H2AFB1P0C5Y9 115 aa13.18□□□□□ -0.3
CLK2-202ENST00000361168 UBE2G2P60604 165 aa13.18□□□□□ -0.3
CLK2-202ENST00000361168 LINC00322Q6ZN03 302 aaPredicted RBP13.18□□□□□ -0.3
CLK2-202ENST00000361168 SUN5Q8TC36 379 aa13.18□□□□□ -0.3
CLK2-202ENST00000361168 MBD3L1Q8WWY6 194 aa13.18□□□□□ -0.3
CLK2-202ENST00000361168 RPUSD4Q96CM3 377 aaKnown RBP13.18□□□□□ -0.3
CLK2-202ENST00000361168 SBSPONQ8IVN8 264 aa13.17□□□□□ -0.3
CLK2-202ENST00000361168 ASCL2Q99929 193 aa13.17□□□□□ -0.3
CLK2-202ENST00000361168 SAV1Q9H4B6 383 aaPredicted RBP13.17□□□□□ -0.3
CLK2-202ENST00000361168 YTHDF2Q9Y5A9 579 aaKnown RBP13.17□□□□□ -0.3
CLK2-202ENST00000361168 A0A0J9YX75 114 aa13.17□□□□□ -0.3
CLK2-202ENST00000361168 ZNF705EA8MWA4 302 aaPredicted RBP13.17□□□□□ -0.3
CLK2-202ENST00000361168 H3BMM0 161 aa13.17□□□□□ -0.3
CLK2-202ENST00000361168 ZNF253O75346 499 aa13.17□□□□□ -0.3
CLK2-202ENST00000361168 TEX261Q6UWH6 196 aa13.17□□□□□ -0.3
CLK2-202ENST00000361168 GGTLC3B5MD39 225 aa13.16□□□□□ -0.3
CLK2-202ENST00000361168 DPPA3Q6W0C5 159 aa13.16□□□□□ -0.3
CLK2-202ENST00000361168 OR4B1Q8NGF8 309 aa13.16□□□□□ -0.3
CLK2-202ENST00000361168 PGPA6NDG6 321 aa13.15□□□□□ -0.3
CLK2-202ENST00000361168 A8MZ25 164 aa13.15□□□□□ -0.3
CLK2-202ENST00000361168 HLA-DRB4P13762 266 aa13.15□□□□□ -0.3
CLK2-202ENST00000361168 RAB5CP51148 216 aa13.15□□□□□ -0.3
CLK2-202ENST00000361168 PSG9Q00887 426 aa13.15□□□□□ -0.3
CLK2-202ENST00000361168 SAMD13Q5VXD3 122 aa13.15□□□□□ -0.3
CLK2-202ENST00000361168 FOXI2Q6ZQN5 318 aa13.15□□□□□ -0.3
CLK2-202ENST00000361168 TRPT1Q86TN4 253 aaKnown RBP13.15□□□□□ -0.3
CLK2-202ENST00000361168 STHQ8IWL8 128 aa13.15□□□□□ -0.3
CLK2-202ENST00000361168 HLA-DRB4X5D2U9 266 aa13.15□□□□□ -0.3
CLK2-202ENST00000361168 CNN1P51911 297 aaKnown RBP13.15□□□□□ -0.3
CLK2-202ENST00000361168 CMC4P56277 68 aaPredicted RBP13.15□□□□□ -0.3
CLK2-202ENST00000361168 GNG5P63218 68 aa13.15□□□□□ -0.3
CLK2-202ENST00000361168 ZNF680Q8NEM1 530 aa13.15□□□□□ -0.3
CLK2-202ENST00000361168 AAMDCQ9H7C9 122 aa13.15□□□□□ -0.3
CLK2-202ENST00000361168 STAB2Q8WWQ8 2551 aa13.14□□□□□ -0.31
CLK2-202ENST00000361168 IGKV2-40A0A087WW87 121 aaPredicted RBP13.14□□□□□ -0.31
CLK2-202ENST00000361168 IGKV2D-40P01614 121 aaPredicted RBP13.14□□□□□ -0.31
CLK2-202ENST00000361168 GIG44P09565 113 aaPredicted RBP13.14□□□□□ -0.31
CLK2-202ENST00000361168 FXYD7P58549 80 aa13.14□□□□□ -0.31
CLK2-202ENST00000361168 SUMO1P63165 101 aaKnown RBP13.14□□□□□ -0.31
CLK2-202ENST00000361168 HIST1H1AQ02539 215 aaPredicted RBP13.14□□□□□ -0.31
CLK2-202ENST00000361168 ERCC8Q13216 396 aa13.14□□□□□ -0.31
CLK2-202ENST00000361168 OR8A1Q8NGG7 326 aa13.14□□□□□ -0.31
CLK2-202ENST00000361168 SLC35B3Q9H1N7 401 aa13.14□□□□□ -0.31
CLK2-202ENST00000361168 TMEM167BQ9NRX6 74 aa13.14□□□□□ -0.31
CLK2-202ENST00000361168 LOC102724200A0A096LPH7 203 aaPredicted RBP13.13□□□□□ -0.31
CLK2-202ENST00000361168 HAGHQ16775 308 aa13.13□□□□□ -0.31
CLK2-202ENST00000361168 RPH3ALQ9UNE2 315 aa13.13□□□□□ -0.31
CLK2-202ENST00000361168 FAM74A7A6NL05 159 aa13.13□□□□□ -0.31
CLK2-202ENST00000361168 EBLN2Q6P2I7 272 aa13.13□□□□□ -0.31
CLK2-202ENST00000361168 LYPD1Q8N2G4 141 aa13.12□□□□□ -0.31
CLK2-202ENST00000361168 VGLL1Q99990 258 aa13.12□□□□□ -0.31
CLK2-202ENST00000361168 OTORQ9NRC9 128 aa13.12□□□□□ -0.31
CLK2-202ENST00000361168 PAGE4O60829 102 aa13.11□□□□□ -0.31
CLK2-202ENST00000361168 ATP5G3P48201 142 aa13.11□□□□□ -0.31
CLK2-202ENST00000361168 KIR3DS1Q14943 382 aa13.11□□□□□ -0.31
CLK2-202ENST00000361168 SGK494Q96LW2 274 aa13.11□□□□□ -0.31
CLK2-202ENST00000361168 CLEC5AQ9NY25 188 aa13.11□□□□□ -0.31
CLK2-202ENST00000361168 AMTNQ6UX39 209 aa13.11□□□□□ -0.31
CLK2-202ENST00000361168 RETNQ9HD89 108 aa13.11□□□□□ -0.31
CLK2-202ENST00000361168 GNG13Q9P2W3 67 aa13.11□□□□□ -0.31
CLK2-202ENST00000361168 TRAV8-1A0A0A6YYK1 113 aa13.1□□□□□ -0.31
CLK2-202ENST00000361168 TRAV1-1A0A0B4J248 108 aa13.1□□□□□ -0.31
CLK2-202ENST00000361168 M0R2Z0 102 aa13.1□□□□□ -0.31
CLK2-202ENST00000361168 IFITM2Q01629 132 aa13.1□□□□□ -0.31
CLK2-202ENST00000361168 AGPAT4-IT1Q9H0P7 198 aa13.1□□□□□ -0.31
CLK2-202ENST00000361168 A0A1W2PRE2 83 aa13.09□□□□□ -0.31
CLK2-202ENST00000361168 DIRC3C9JPN6 131 aa13.09□□□□□ -0.31
CLK2-202ENST00000361168 TEX46H3BTG2 121 aa13.09□□□□□ -0.31
CLK2-202ENST00000361168 SLC25A5P05141 298 aaKnown RBP13.09□□□□□ -0.31
CLK2-202ENST00000361168 CT45A10P0DMU9 189 aa13.09□□□□□ -0.31
CLK2-202ENST00000361168 Q8TAT8 98 aa13.09□□□□□ -0.31
CLK2-202ENST00000361168 MRPL53Q96EL3 112 aaKnown RBP13.09□□□□□ -0.31
CLK2-202ENST00000361168 LINC00479Q96M42 142 aa13.09□□□□□ -0.31
CLK2-202ENST00000361168 CA1P00915 261 aaPredicted RBP13.09□□□□□ -0.31
CLK2-202ENST00000361168 CST9LP1Q5W188 147 aa13.09□□□□□ -0.31
CLK2-202ENST00000361168 GOLT1AQ6ZVE7 132 aa13.09□□□□□ -0.31
CLK2-202ENST00000361168 CSTL1Q9H114 145 aa13.09□□□□□ -0.31
CLK2-202ENST00000361168 XCL2Q9UBD3 114 aa13.09□□□□□ -0.31
CLK2-202ENST00000361168 SPINK13Q1W4C9 94 aa13.08□□□□□ -0.32
CLK2-202ENST00000361168 DEFB135Q30KP9 77 aa13.08□□□□□ -0.32
CLK2-202ENST00000361168 CCDC28AQ8IWP9 274 aa13.08□□□□□ -0.32
CLK2-202ENST00000361168 CMTM2Q8TAZ6 248 aa13.08□□□□□ -0.32
CLK2-202ENST00000361168 B9D2Q9BPU9 175 aa13.08□□□□□ -0.32
CLK2-202ENST00000361168 PRELID1Q9Y255 219 aa13.08□□□□□ -0.32
CLK2-202ENST00000361168 TRAV12-2A0A075B6T6 113 aa13.07□□□□□ -0.32
CLK2-202ENST00000361168 OR10J6PQ8NGY7 276 aa13.07□□□□□ -0.32
CLK2-202ENST00000361168 A8MTW9 85 aa13.07□□□□□ -0.32
CLK2-202ENST00000361168 NPIPB6E9PJ23 425 aa13.07□□□□□ -0.32
CLK2-202ENST00000361168 J3KRW8 73 aa13.07□□□□□ -0.32
CLK2-202ENST00000361168 LYPD6BQ8NI32 183 aa13.07□□□□□ -0.32
CLK2-202ENST00000361168 EPDR1Q9UM22 224 aa13.07□□□□□ -0.32
CLK2-202ENST00000361168 TCRAP04437 139 aa13.06□□□□□ -0.32
CLK2-202ENST00000361168 CSN1S1P47710 185 aa13.06□□□□□ -0.32
CLK2-202ENST00000361168 C5orf17Q8NAS9 161 aa13.06□□□□□ -0.32
CLK2-202ENST00000361168 CRXO43186 299 aaPredicted RBP13.05□□□□□ -0.32
CLK2-202ENST00000361168 IFNA7P01567 189 aa13.05□□□□□ -0.32
CLK2-202ENST00000361168 RXFP4Q8TDU9 374 aa13.05□□□□□ -0.32
CLK2-202ENST00000361168 RARRES2Q99969 163 aa13.05□□□□□ -0.32
CLK2-202ENST00000361168 TRAV34A0A0B4J273 112 aa13.05□□□□□ -0.32
CLK2-202ENST00000361168 KIR2DL5BA0A0G2JN68 375 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms