RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 NCOR2Q9Y618 2525 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 MAP1AP78559 2803 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-202ENST00000360642 HRNRQ86YZ3 2850 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-202ENST00000360642 AMTP48728 403 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 ARF6P62330 175 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 PLGLAQ15195 96 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 TMEM190Q8WZ59 177 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 ALKBH7Q9BT30 221 aaPredicted RBP5.7□□□□□ -1.5
CLCN3-202ENST00000360642 GFRA4Q9GZZ7 299 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 SPTBN1Q01082 2364 aaKnown RBP5.7□□□□□ -1.5
CLCN3-202ENST00000360642 CACNA1BQ00975 2339 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 SPTAN1Q13813 2472 aaKnown RBP5.7□□□□□ -1.5
CLCN3-202ENST00000360642 CNIH1O95406 144 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 PRTN3P24158 256 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 KLRB1Q12918 225 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 ZNF491Q8N8L2 437 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 MIEN1Q9BRT3 115 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 SHANK2-AS3Q9BTD1 123 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 RPH3ALQ9UNE2 315 aa5.7□□□□□ -1.5
CLCN3-202ENST00000360642 FAM231BA6NCW3 169 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 A8MWL6 223 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 H3BRN7 92 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 OVOL3O00110 214 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 MRPS12O15235 138 aaKnown RBP5.69□□□□□ -1.5
CLCN3-202ENST00000360642 RNF224P0DH78 156 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 IGLC2P0DOY2 106 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 SSTP61278 116 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 TCF24Q7RTU0 167 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 Q86TA4 180 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 MRPL52Q86TS9 123 aaKnown RBP5.69□□□□□ -1.5
CLCN3-202ENST00000360642 EXOC3-AS1Q8N2X6 119 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 ASCL2Q99929 193 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 HILPDAQ9Y5L2 63 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 SOX21Q9Y651 276 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-202ENST00000360642 TRBV19A0A075B6N1 114 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 A0A1W2PRD5 423 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 A0A1W2PRF3 423 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 A0A1W2PRM7 423 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 WI2-2373I1.2A0A1W2PRP0 233 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 P01737 135 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 PMCHP20382 165 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 CD24P25063 80 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 CEACAM3P40198 252 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 CTRLP40313 264 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 UCNP55089 124 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 KRTDAPP60985 99 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 KIR3DL3Q8N743 410 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 TIMD4Q96H15 378 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 VAMP8Q9BV40 100 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 LOC105371242A0A075B767 164 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 TRAV8-1A0A0A6YYK1 113 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 M0R143 59 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 C3orf79P0CE67 100 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 GPR6P46095 362 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-202ENST00000360642 FOXA3P55318 350 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-202ENST00000360642 NUTF2P61970 127 aaKnown RBP5.69□□□□□ -1.5
CLCN3-202ENST00000360642 HBBP68871 147 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 KLRD1Q13241 179 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 C5orf64Q2M2E5 130 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 Q71RC1 249 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-202ENST00000360642 FAM19A2Q8N3H0 131 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 ZNF48Q96MX3 618 aaPredicted RBP5.69□□□□□ -1.5
CLCN3-202ENST00000360642 RNF24Q9Y225 148 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 PAM16Q9Y3D7 125 aa5.69□□□□□ -1.5
CLCN3-202ENST00000360642 ANKHD1Q8IWZ3 2542 aaKnown RBP5.68□□□□□ -1.5
CLCN3-202ENST00000360642 IGLV11-55A0A075B6I3 123 aa5.68□□□□□ -1.5
CLCN3-202ENST00000360642 LYPD1Q8N2G4 141 aa5.68□□□□□ -1.5
CLCN3-202ENST00000360642 TMEM75Q8N9X5 138 aa5.68□□□□□ -1.5
CLCN3-202ENST00000360642 OR4B1Q8NGF8 309 aa5.68□□□□□ -1.5
CLCN3-202ENST00000360642 C17orf77Q96MU5 243 aa5.68□□□□□ -1.5
CLCN3-202ENST00000360642 APOHP02749 345 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-202ENST00000360642 EBI3Q14213 229 aa5.68□□□□□ -1.5
CLCN3-202ENST00000360642 ZNF562Q6V9R5 426 aa5.68□□□□□ -1.5
CLCN3-202ENST00000360642 BPIFA4PQ86YQ2 179 aa5.68□□□□□ -1.5
CLCN3-202ENST00000360642 CIARTQ8N365 385 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-202ENST00000360642 Q8N6K4 173 aa5.68□□□□□ -1.5
CLCN3-202ENST00000360642 URB1-AS1Q96HZ7 61 aa5.68□□□□□ -1.5
CLCN3-202ENST00000360642 S4R3C0 116 aa5.68□□□□□ -1.5
CLCN3-202ENST00000360642 WNK2Q9Y3S1 2297 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 TRAV30A0A087WSZ9 112 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 KLF17Q5JT82 389 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-202ENST00000360642 GOLT1AQ6ZVE7 132 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 DYNAPQ8N1N2 210 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 TTC9CQ8N5M4 171 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 OR2D3Q8NGH3 330 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 ZNF414Q96IQ9 312 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 ZNF705AQ6ZN79 300 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-202ENST00000360642 PRNTQ86SH4 94 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 PGLYRP4Q96LB8 373 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 IL4P05112 153 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 OR4F17Q8NGA8 305 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 BORCS7Q96B45 105 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 ZC2HC1AQ96GY0 325 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 YAE1D1Q9NRH1 226 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 ZFP30Q9Y2G7 519 aa5.67□□□□□ -1.5
CLCN3-202ENST00000360642 C2orf70A6NJV1 201 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 OOSP1A8MZH6 123 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 M0QZK8 103 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 HSBP1O75506 76 aa5.66□□□□□ -1.5
CLCN3-202ENST00000360642 HLA-DRB1P01911 266 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms