RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 RNASE6Q93091 150 aaKnown RBP10.83□□□□□ -0.68
CCDC144A-203ENST00000360495 DKK2Q9UBU2 259 aa10.83□□□□□ -0.68
CCDC144A-203ENST00000360495 NDUFA12Q9UI09 145 aa10.83□□□□□ -0.68
CCDC144A-203ENST00000360495 COL5A3P25940 1745 aaPredicted RBP10.83□□□□□ -0.68
CCDC144A-203ENST00000360495 TRAV26-2A0A0B4J265 109 aa10.83□□□□□ -0.68
CCDC144A-203ENST00000360495 NPYP01303 97 aa10.83□□□□□ -0.68
CCDC144A-203ENST00000360495 TCTEX1D4Q5JR98 221 aa10.83□□□□□ -0.68
CCDC144A-203ENST00000360495 KLRD1Q13241 179 aa10.83□□□□□ -0.68
CCDC144A-203ENST00000360495 COL4A1P02462 1669 aa10.82□□□□□ -0.68
CCDC144A-203ENST00000360495 THBDP07204 575 aa10.82□□□□□ -0.68
CCDC144A-203ENST00000360495 SS18Q15532 418 aa10.82□□□□□ -0.68
CCDC144A-203ENST00000360495 TMEM219Q86XT9 240 aa10.82□□□□□ -0.68
CCDC144A-203ENST00000360495 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.82□□□□□ -0.68
CCDC144A-203ENST00000360495 MYOFQ9NZM1 2061 aa10.82□□□□□ -0.68
CCDC144A-203ENST00000360495 DOCK11Q5JSL3 2073 aa10.82□□□□□ -0.68
CCDC144A-203ENST00000360495 NDUFS7O75251 213 aa10.82□□□□□ -0.68
CCDC144A-203ENST00000360495 A0A1W2PPI3 338 aa10.81□□□□□ -0.68
CCDC144A-203ENST00000360495 GAFA1Q96PS6 74 aa10.81□□□□□ -0.68
CCDC144A-203ENST00000360495 PLXNB2O15031 1838 aa10.81□□□□□ -0.68
CCDC144A-203ENST00000360495 PFN2P35080 140 aa10.81□□□□□ -0.68
CCDC144A-203ENST00000360495 IGKV1D-17A0A075B6S4 117 aa10.81□□□□□ -0.68
CCDC144A-203ENST00000360495 TINCRA0A1B0GVN0 87 aa10.81□□□□□ -0.68
CCDC144A-203ENST00000360495 VMO1Q7Z5L0 202 aa10.81□□□□□ -0.68
CCDC144A-203ENST00000360495 HS3ST6Q96QI5 342 aa10.81□□□□□ -0.68
CCDC144A-203ENST00000360495 TRBV19A0A075B6N1 114 aa10.81□□□□□ -0.68
CCDC144A-203ENST00000360495 BUB1B-PAK6H3BSN5 160 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 EFNA4P52798 201 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 TMEM178BH3BS89 294 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 I3L3M4 83 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 J3QQQ9 107 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 CRLF1O75462 422 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 SDK2Q58EX2 2172 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 SDHAF1A6NFY7 115 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 ASPHD1Q5U4P2 390 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 EPOPA6NHQ4 379 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 DKK1O94907 266 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 TMEM14BQ9NUH8 114 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 ABCA1O95477 2261 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 OOSP1A8MZH6 123 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 COA6Q5JTJ3 125 aaKnown RBP10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 PCP2Q8IVA1 136 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 ZNF747Q9BV97 191 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 RHPN1-AS1Q9BWJ2 59 aa10.8□□□□□ -0.68
CCDC144A-203ENST00000360495 SHANK3Q9BYB0 1731 aa10.79□□□□□ -0.68
CCDC144A-203ENST00000360495 CLPSP04118 112 aa10.79□□□□□ -0.68
CCDC144A-203ENST00000360495 VWCEQ96DN2 955 aa10.79□□□□□ -0.68
CCDC144A-203ENST00000360495 CFC1BP0CG36 223 aa10.79□□□□□ -0.68
CCDC144A-203ENST00000360495 CFC1P0CG37 223 aa10.79□□□□□ -0.68
CCDC144A-203ENST00000360495 FHL1Q13642 323 aa10.79□□□□□ -0.68
CCDC144A-203ENST00000360495 MINOS1Q5TGZ0 78 aa10.79□□□□□ -0.68
CCDC144A-203ENST00000360495 MINOS1-NBL1R4GNA1 71 aa10.79□□□□□ -0.68
CCDC144A-203ENST00000360495 DOPEY2Q9Y3R5 2298 aa10.79□□□□□ -0.68
CCDC144A-203ENST00000360495 IGLV3-19P01714 112 aa10.79□□□□□ -0.68
CCDC144A-203ENST00000360495 SMIM2Q9BVW6 85 aa10.79□□□□□ -0.68
CCDC144A-203ENST00000360495 WNK3Q9BYP7 1800 aa10.79□□□□□ -0.68
CCDC144A-203ENST00000360495 KNCNA6PVL3 124 aa10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 NTN3O00634 580 aaPredicted RBP10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 IGHG3P01860 377 aa10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 E9PLN8 166 aa10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 ZNF672Q499Z4 452 aaPredicted RBP10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 HEATR1Q9H583 2144 aaKnown RBP10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 K7EN84 100 aa10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 DSCR8Q96T75 97 aa10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 IGKV1-39P01597 117 aa10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 IGKV1D-39P04432 117 aa10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 KLF5Q13887 457 aaPredicted RBP10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 C11orf44Q8N8P7 122 aa10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 TAF1LQ8IZX4 1826 aa10.78□□□□□ -0.68
CCDC144A-203ENST00000360495 IGLL5B9A064 214 aa10.77□□□□□ -0.68
CCDC144A-203ENST00000360495 IGLC1P0CG04 106 aa10.77□□□□□ -0.68
CCDC144A-203ENST00000360495 LYPD6BQ8NI32 183 aa10.77□□□□□ -0.68
CCDC144A-203ENST00000360495 UBE2E2Q96LR5 201 aa10.77□□□□□ -0.68
CCDC144A-203ENST00000360495 PRR25Q96S07 402 aa10.77□□□□□ -0.68
CCDC144A-203ENST00000360495 MSRB2Q9Y3D2 182 aa10.77□□□□□ -0.69
CCDC144A-203ENST00000360495 TRAV25A0A0B4J276 109 aa10.77□□□□□ -0.69
CCDC144A-203ENST00000360495 TRAV13-2A0A0B4J235 113 aa10.77□□□□□ -0.69
CCDC144A-203ENST00000360495 CMC4P56277 68 aaPredicted RBP10.77□□□□□ -0.69
CCDC144A-203ENST00000360495 ZC2HC1AQ96GY0 325 aa10.77□□□□□ -0.69
CCDC144A-203ENST00000360495 J3KT08 172 aa10.76□□□□□ -0.69
CCDC144A-203ENST00000360495 FAM223BA6NKX1 122 aa10.76□□□□□ -0.69
CCDC144A-203ENST00000360495 TDRG1Q3Y452 100 aa10.76□□□□□ -0.69
CCDC144A-203ENST00000360495 FAM223AQ8IWN6 122 aa10.76□□□□□ -0.69
CCDC144A-203ENST00000360495 C1orf147Q96MC9 270 aaPredicted RBP10.76□□□□□ -0.69
CCDC144A-203ENST00000360495 NDUFA4L2Q9NRX3 87 aa10.76□□□□□ -0.69
CCDC144A-203ENST00000360495 FOXL2NBQ6ZUU3 175 aa10.76□□□□□ -0.69
CCDC144A-203ENST00000360495 USMG5Q96IX5 58 aa10.76□□□□□ -0.69
CCDC144A-203ENST00000360495 SCRT2Q9NQ03 307 aa10.76□□□□□ -0.69
CCDC144A-203ENST00000360495 PRSS29PA6NIE9 313 aa10.75□□□□□ -0.69
CCDC144A-203ENST00000360495 NDUFC2O95298 119 aa10.75□□□□□ -0.69
CCDC144A-203ENST00000360495 ACYP1P07311 99 aa10.75□□□□□ -0.69
CCDC144A-203ENST00000360495 RHODO00212 210 aa10.75□□□□□ -0.69
CCDC144A-203ENST00000360495 WIPF2Q8TF74 440 aaPredicted RBP10.75□□□□□ -0.69
CCDC144A-203ENST00000360495 LTBRP36941 435 aa10.75□□□□□ -0.69
CCDC144A-203ENST00000360495 FOXI2Q6ZQN5 318 aa10.75□□□□□ -0.69
CCDC144A-203ENST00000360495 ZNRD1Q9P1U0 126 aa10.75□□□□□ -0.69
CCDC144A-203ENST00000360495 NYNRINQ9P2P1 1898 aaKnown RBP10.75□□□□□ -0.69
CCDC144A-203ENST00000360495 SHISA9B4DS77 424 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 NXPH4O95158 308 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 RPL35AP18077 110 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms