RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 TNS1Q9HBL0 1735 aaKnown RBP7.6□□□□□ -1.19
VPS13A-203ENST00000360280 ATOX1O00244 68 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 SYNJ2BPP57105 145 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 BMPERQ8N8U9 685 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 RMI2Q96E14 147 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 IGLC2P0DOY2 106 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 IGLC3P0DOY3 106 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 SMKR1H3BMG3 65 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 A0A087WWL8 130 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 RFPL3SP0C7P2 107 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 PPP1R32Q7Z5V6 425 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 ACACAQ13085 2346 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 TAL2Q16559 108 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 LINC00114Q6XXX2 140 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 PRSS46E5RG02 174 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 TMEM14EPQ6UXP3 125 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 SIGLEC12Q96PQ1 595 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 VMO1Q7Z5L0 202 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 CNOT1A5YKK6 2376 aaKnown RBP7.6□□□□□ -1.19
VPS13A-203ENST00000360280 F6UB75 175 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 H3BQ85 93 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 IGHV3-53P01767 116 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 KNCNA6PVL3 124 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 THBDP07204 575 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 ZNF106Q9H2Y7 1883 aaKnown RBP7.6□□□□□ -1.19
VPS13A-203ENST00000360280 C2orf66Q6UXQ4 117 aa7.6□□□□□ -1.19
VPS13A-203ENST00000360280 PFN1P07737 140 aaKnown RBP7.59□□□□□ -1.19
VPS13A-203ENST00000360280 PFN2P35080 140 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 H3BMG7 143 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 SIVA1O15304 175 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 SRRM5B3KS81 715 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 Q8N8P6 123 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 KLHDC3Q9BQ90 382 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 TMEM243Q9BU79 118 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 IGHV1-3A0A0C4DH29 117 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 HERVK_113P63121 156 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 NDPQ00604 133 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 LINC01545Q5VT33 79 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 IGKV1D-43A0A0B4J1Z2 117 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 M0R1W7 72 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 RNF166Q96A37 237 aaPredicted RBP7.59□□□□□ -1.19
VPS13A-203ENST00000360280 SCRT2Q9NQ03 307 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 ORMDL1Q9P0S3 153 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 IGHV2-70P01814 119 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 IGHV1-8P0DP01 117 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 BAALCQ8WXS3 180 aa7.59□□□□□ -1.19
VPS13A-203ENST00000360280 WDR90Q96KV7 1748 aa7.59□□□□□ -1.2
VPS13A-203ENST00000360280 LHFPL1Q86WI0 220 aa7.59□□□□□ -1.2
VPS13A-203ENST00000360280 NDUFB8O95169 186 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 CTSBP07858 339 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 SLC25A16P16260 332 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 K7EMI3 77 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 PKDREJQ9NTG1 2253 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 J3QRE1 110 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 LGALS9BQ3B8N2 356 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 LGALS9CQ6DKI2 356 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 C18orf32Q8TCD1 76 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 SMIM20Q8N5G0 67 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 H0YJW9 148 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 RPL35AP18077 110 aaKnown RBP7.58□□□□□ -1.2
VPS13A-203ENST00000360280 A0A0A6YYD4 124 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 RNF114Q9Y508 228 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 C15orf53Q8NAA6 179 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 KLHL30-AS1Q8NEE0 82 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 ZNF492Q9P255 531 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 PLXNA4Q9HCM2 1894 aa7.58□□□□□ -1.2
VPS13A-203ENST00000360280 ARHGAP32A7KAX9 2087 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 HLA-DRB4P13762 266 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 MP68P56378 58 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 PRB3Q04118 309 aaPredicted RBP7.57□□□□□ -1.2
VPS13A-203ENST00000360280 REG4Q9BYZ8 158 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 HLA-DRB4X5D2U9 266 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 ARMS2P0C7Q2 107 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 SEC61GP60059 68 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 FAM104BQ5XKR9 115 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 CFHR4Q92496 578 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 RNASE2P10153 161 aaKnown RBP7.57□□□□□ -1.2
VPS13A-203ENST00000360280 CYTL1Q9NRR1 136 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 NDUFA12Q9UI09 145 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 CELA3AP09093 270 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 TIAF1O95411 115 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 C5orf64Q2M2E5 130 aa7.57□□□□□ -1.2
VPS13A-203ENST00000360280 GAS1P54826 345 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 C8orf31Q8N9H6 132 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 SMIM2Q9BVW6 85 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 F8VRH5 84 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 LHBP01229 141 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 DEFB130BP0DP73 79 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 DEFB130AP0DP74 79 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 SS18L2Q9UHA2 77 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 CDKN1BP46527 198 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 DEFB104AQ8WTQ1 72 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 B5MCH6 92 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 BUB1B-PAK6H3BSN5 160 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 NMSQ5H8A3 153 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 PAQR4Q8N4S7 273 aaPredicted RBP7.56□□□□□ -1.2
VPS13A-203ENST00000360280 EIF4EBP2Q13542 120 aaPredicted RBP7.56□□□□□ -1.2
VPS13A-203ENST00000360280 IGKV1-9A0A0C4DH69 117 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 TMEM219Q86XT9 240 aa7.56□□□□□ -1.2
VPS13A-203ENST00000360280 ROS1P08922 2347 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms