RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 DIRC3C9JPN6 131 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 C12orf54Q6X4T0 127 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 TMEM61Q8N0U2 210 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 RNF182Q8N6D2 247 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 KLF12Q9Y4X4 402 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 TRAV2A0A0B4J234 112 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 K7EQG2 157 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 TSPAN4O14817 238 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 AKR1C3P42330 323 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 RPL35P42766 123 aaKnown RBP18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 CSN1S1P47710 185 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 PSG3Q16557 428 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 LCN12Q6JVE5 192 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 GBGT1Q8N5D6 347 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 C3orf56Q8N813 242 aa18.69■□□□□ 0.58
SHARPIN-201ENST00000359551 TRAV25A0A0B4J276 109 aa18.68■□□□□ 0.58
SHARPIN-201ENST00000359551 ZNF674Q2M3X9 581 aa18.68■□□□□ 0.58
SHARPIN-201ENST00000359551 SHISA2Q6UWI4 295 aa18.68■□□□□ 0.58
SHARPIN-201ENST00000359551 RPH3ALQ9UNE2 315 aa18.68■□□□□ 0.58
SHARPIN-201ENST00000359551 SERTM2A0A1B0GWG4 89 aa18.67■□□□□ 0.58
SHARPIN-201ENST00000359551 CNN1P51911 297 aaKnown RBP18.67■□□□□ 0.58
SHARPIN-201ENST00000359551 PAFAH1B2P68402 229 aa18.67■□□□□ 0.58
SHARPIN-201ENST00000359551 CD300EQ496F6 205 aaPredicted RBP18.67■□□□□ 0.58
SHARPIN-201ENST00000359551 C20orf173Q96LM9 149 aa18.67■□□□□ 0.58
SHARPIN-201ENST00000359551 LINC00479Q96M42 142 aa18.67■□□□□ 0.58
SHARPIN-201ENST00000359551 TRBV20OR9-2A0A075B6H5 130 aa18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 TAS2R60P59551 318 aa18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 TMEM183BQ1AE95 376 aa18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 RBPMS2Q6ZRY4 209 aaKnown RBP18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 GOLT1AQ6ZVE7 132 aa18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 NIPSNAP3BQ9BS92 247 aa18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 ZNF705FA8MVS1 300 aaPredicted RBP18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 C9JCJ5 164 aa18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 DNASE2O00115 360 aaPredicted RBP18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 SAP30O75446 220 aa18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 APOC3P02656 99 aa18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 ID1P41134 155 aa18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 GUCA2BQ16661 112 aa18.66■□□□□ 0.58
SHARPIN-201ENST00000359551 IGLV1-51P01701 117 aa18.65■□□□□ 0.58
SHARPIN-201ENST00000359551 S100A9P06702 114 aaKnown RBP18.65■□□□□ 0.58
SHARPIN-201ENST00000359551 FMC1Q96HJ9 113 aa18.65■□□□□ 0.58
SHARPIN-201ENST00000359551 NAT8Q9UHE5 227 aa18.65■□□□□ 0.58
SHARPIN-201ENST00000359551 K7EQM0 130 aa18.64■□□□□ 0.57
SHARPIN-201ENST00000359551 IGLV2-11P01706 119 aa18.64■□□□□ 0.57
SHARPIN-201ENST00000359551 WFDC3Q8IUB2 231 aa18.64■□□□□ 0.57
SHARPIN-201ENST00000359551 TMEM75Q8N9X5 138 aa18.64■□□□□ 0.57
SHARPIN-201ENST00000359551 IGF2BP2-AS1Q96M15 143 aa18.64■□□□□ 0.57
SHARPIN-201ENST00000359551 SPAG8Q99932 426 aaPredicted RBP18.64■□□□□ 0.57
SHARPIN-201ENST00000359551 TRAV34A0A0B4J273 112 aa18.63■□□□□ 0.57
SHARPIN-201ENST00000359551 TRBV6-1A0A0K0K1D8 114 aa18.63■□□□□ 0.57
SHARPIN-201ENST00000359551 RBAKDNA6NC62 111 aa18.63■□□□□ 0.57
SHARPIN-201ENST00000359551 TFPI2P48307 235 aa18.63■□□□□ 0.57
SHARPIN-201ENST00000359551 TMEM241Q24JQ0 296 aa18.63■□□□□ 0.57
SHARPIN-201ENST00000359551 OR2K2Q8NGT1 345 aa18.63■□□□□ 0.57
SHARPIN-201ENST00000359551 SDF2L1Q9HCN8 221 aa18.63■□□□□ 0.57
SHARPIN-201ENST00000359551 PRAC2D3DTV9 90 aa18.63■□□□□ 0.57
SHARPIN-201ENST00000359551 FAM24BQ8N5W8 94 aa18.63■□□□□ 0.57
SHARPIN-201ENST00000359551 UBE2G1P62253 170 aa18.62■□□□□ 0.57
SHARPIN-201ENST00000359551 CENPWQ5EE01 88 aa18.62■□□□□ 0.57
SHARPIN-201ENST00000359551 SVBPQ8N300 66 aa18.62■□□□□ 0.57
SHARPIN-201ENST00000359551 ZNF738Q8NE65 137 aa18.62■□□□□ 0.57
SHARPIN-201ENST00000359551 TVP23CQ96ET8 276 aa18.62■□□□□ 0.57
SHARPIN-201ENST00000359551 LY96Q9Y6Y9 160 aa18.62■□□□□ 0.57
SHARPIN-201ENST00000359551 IGKV2-40A0A087WW87 121 aaPredicted RBP18.61■□□□□ 0.57
SHARPIN-201ENST00000359551 IZUMO1RA6ND01 250 aa18.61■□□□□ 0.57
SHARPIN-201ENST00000359551 FBLL1A6NHQ2 334 aaKnown RBP18.61■□□□□ 0.57
SHARPIN-201ENST00000359551 IGKV2D-40P01614 121 aaPredicted RBP18.61■□□□□ 0.57
SHARPIN-201ENST00000359551 SNRPD3P62318 126 aaKnown RBP18.61■□□□□ 0.57
SHARPIN-201ENST00000359551 WFDC9Q8NEX5 89 aa18.61■□□□□ 0.57
SHARPIN-201ENST00000359551 SPATA3Q8NHX4 192 aa18.61■□□□□ 0.57
SHARPIN-201ENST00000359551 TRAV8-1A0A0A6YYK1 113 aa18.6■□□□□ 0.57
SHARPIN-201ENST00000359551 GNG4P50150 75 aa18.6■□□□□ 0.57
SHARPIN-201ENST00000359551 PNRC1Q12796 327 aaPredicted RBP18.6■□□□□ 0.57
SHARPIN-201ENST00000359551 ZNF256Q9Y2P7 627 aaPredicted RBP18.6■□□□□ 0.57
SHARPIN-201ENST00000359551 PRB4P10163 310 aaPredicted RBP18.6■□□□□ 0.57
SHARPIN-201ENST00000359551 FLI1Q01543 452 aaPredicted RBP18.6■□□□□ 0.57
SHARPIN-201ENST00000359551 Q86TA4 180 aa18.6■□□□□ 0.57
SHARPIN-201ENST00000359551 SGK494Q96LW2 274 aa18.6■□□□□ 0.57
SHARPIN-201ENST00000359551 OR4C46A6NHA9 309 aa18.59■□□□□ 0.57
SHARPIN-201ENST00000359551 LTAP01374 205 aa18.59■□□□□ 0.57
SHARPIN-201ENST00000359551 IGLV2-8P01709 118 aa18.59■□□□□ 0.57
SHARPIN-201ENST00000359551 ZNF688P0C7X2 276 aa18.59■□□□□ 0.57
SHARPIN-201ENST00000359551 INSL3P51460 131 aa18.59■□□□□ 0.57
SHARPIN-201ENST00000359551 RPL23P62829 140 aaKnown RBP18.59■□□□□ 0.57
SHARPIN-201ENST00000359551 LINC01551Q86U37 167 aa18.59■□□□□ 0.57
SHARPIN-201ENST00000359551 PSG8Q9UQ74 426 aa18.59■□□□□ 0.57
SHARPIN-201ENST00000359551 SORL1Q92673 2214 aa18.59■□□□□ 0.57
SHARPIN-201ENST00000359551 STAB1Q9NY15 2570 aa18.58■□□□□ 0.57
SHARPIN-201ENST00000359551 PGPEP1LA6NFU8 196 aa18.58■□□□□ 0.57
SHARPIN-201ENST00000359551 OCC1Q8TAD7 63 aa18.58■□□□□ 0.57
SHARPIN-201ENST00000359551 SMIM12Q96EX1 92 aa18.58■□□□□ 0.57
SHARPIN-201ENST00000359551 VGLL1Q99990 258 aa18.58■□□□□ 0.57
SHARPIN-201ENST00000359551 COL6A5A8TX70 2615 aa18.57■□□□□ 0.56
SHARPIN-201ENST00000359551 C9orf47Q6ZRZ4 202 aa18.57■□□□□ 0.56
SHARPIN-201ENST00000359551 BAGE2Q86Y30 109 aa18.57■□□□□ 0.56
SHARPIN-201ENST00000359551 CLRN3Q8NCR9 226 aa18.57■□□□□ 0.56
SHARPIN-201ENST00000359551 SNAPINO95295 136 aa18.57■□□□□ 0.56
SHARPIN-201ENST00000359551 PSMG4Q5JS54 123 aa18.57■□□□□ 0.56
SHARPIN-201ENST00000359551 C9orf66Q5T8R8 295 aa18.57■□□□□ 0.56
SHARPIN-201ENST00000359551 MLST8Q9BVC4 326 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms