RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MSMBP08118 114 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 NTF3P20783 257 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 LY6EQ16553 131 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 PET117Q6UWS5 81 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 PATE2Q6UY27 113 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 ARPC1AQ92747 370 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 NPFFR1Q9GZQ6 430 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 TNFRSF19Q9NS68 423 aa9.95□□□□□ -0.82
GGPS1-202ENST00000358966 IGHV7-81A0A0B4J1V7 117 aa9.94□□□□□ -0.82
GGPS1-202ENST00000358966 RNF223E7ERA6 249 aa9.94□□□□□ -0.82
GGPS1-202ENST00000358966 ZNF324O75467 553 aaPredicted RBP9.94□□□□□ -0.82
GGPS1-202ENST00000358966 PYYP10082 97 aa9.94□□□□□ -0.82
GGPS1-202ENST00000358966 RHOBP62745 196 aa9.94□□□□□ -0.82
GGPS1-202ENST00000358966 ECSCRQ19T08 205 aa9.94□□□□□ -0.82
GGPS1-202ENST00000358966 CD300EQ496F6 205 aaPredicted RBP9.94□□□□□ -0.82
GGPS1-202ENST00000358966 FRMD6-AS1P0C7T7 363 aa9.94□□□□□ -0.82
GGPS1-202ENST00000358966 GCHFRP30047 84 aa9.94□□□□□ -0.82
GGPS1-202ENST00000358966 RNF5Q99942 180 aa9.94□□□□□ -0.82
GGPS1-202ENST00000358966 FAM110AQ9BQ89 295 aa9.94□□□□□ -0.82
GGPS1-202ENST00000358966 CR1P17927 2039 aa9.94□□□□□ -0.82
GGPS1-202ENST00000358966 TCRBV4S1A1TA0A5B7 111 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 PSMB11A5LHX3 300 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 FNDC10F2Z333 226 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 H3BTX0 84 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 K7EIM0 57 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 ZNF114Q8NC26 417 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 NAA38Q9BRA0 125 aaKnown RBP9.93□□□□□ -0.82
GGPS1-202ENST00000358966 PSG8Q9UQ74 426 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 AKAP9Q99996 3911 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 IGHV1-69DA0A0B4J2H0 117 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 IGHV3-35A0A0C4DH35 117 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 SCO2A0A1W2PP80 73 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 G3V318 75 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 I3L2K1 104 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 ZNF207O43670 478 aaKnown RBP9.93□□□□□ -0.82
GGPS1-202ENST00000358966 IGHV1-69P01742 117 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 FAM106CPP0CH98 169 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 EGR2P11161 476 aaPredicted RBP9.93□□□□□ -0.82
GGPS1-202ENST00000358966 BOD1L2Q8IYS8 172 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 JMJD8Q96S16 334 aa9.93□□□□□ -0.82
GGPS1-202ENST00000358966 IGHV3OR16-8A0A075B7F1 116 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 CXorf1O96002 111 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 IER3P46695 156 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 TIGITQ495A1 244 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 ZNF562Q6V9R5 426 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 BCL6BQ8N143 479 aaPredicted RBP9.92□□□□□ -0.82
GGPS1-202ENST00000358966 ZNF355PQ9NSJ1 428 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 K7EP34 96 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 ATP6V0E1O15342 81 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 COX7A2P2O60397 106 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 OR2J3O76001 311 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 NDUFB4O95168 129 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 ATP5IP56385 69 aaPredicted RBP9.92□□□□□ -0.82
GGPS1-202ENST00000358966 EBI3Q14213 229 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 FANCD2OSQ96PS1 177 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 C19orf24Q9BVV8 132 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 KCNIP2Q9NS61 270 aa9.92□□□□□ -0.82
GGPS1-202ENST00000358966 SNURFLB1AK76 121 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 OR11H12B2RN74 326 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 SIVA1O15304 175 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 TMEM116Q8NCL8 245 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 OR11H1Q8NG94 326 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 OR11H2Q8NH07 326 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 PIFOQ8TCI5 191 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 AP1S3Q96PC3 154 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 TMUB1Q9BVT8 246 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 SLC25A2Q9BXI2 301 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 A0A096LNT2 108 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 PF4V1P10720 104 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 LINC00305Q7Z4B0 112 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 THAP8Q8NA92 274 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 A0A087X0K7 114 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 OOSP1A8MZH6 123 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 LYZP61626 148 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 PVRIGQ6DKI7 326 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 FAM167A-AS1Q96KT0 104 aa9.91□□□□□ -0.82
GGPS1-202ENST00000358966 TRBV20OR9-2A0A075B6H5 130 aa9.9□□□□□ -0.82
GGPS1-202ENST00000358966 H3BUT2 72 aa9.9□□□□□ -0.82
GGPS1-202ENST00000358966 TGFAP01135 160 aa9.9□□□□□ -0.82
GGPS1-202ENST00000358966 IGKV1-17P01599 117 aa9.9□□□□□ -0.82
GGPS1-202ENST00000358966 C10orf113Q5VZT2 155 aa9.9□□□□□ -0.82
GGPS1-202ENST00000358966 SLC25A34Q6PIV7 304 aa9.9□□□□□ -0.82
GGPS1-202ENST00000358966 OR2K2Q8NGT1 345 aa9.9□□□□□ -0.82
GGPS1-202ENST00000358966 RASL11BQ9BPW5 248 aa9.9□□□□□ -0.82
GGPS1-202ENST00000358966 ST20Q9HBF5 79 aa9.9□□□□□ -0.82
GGPS1-202ENST00000358966 TNFRSF18Q9Y5U5 241 aa9.9□□□□□ -0.82
GGPS1-202ENST00000358966 B4DSR2 109 aa9.9□□□□□ -0.83
GGPS1-202ENST00000358966 AMY1AP04745 511 aa9.9□□□□□ -0.83
GGPS1-202ENST00000358966 PLA2G2AP14555 144 aa9.9□□□□□ -0.83
GGPS1-202ENST00000358966 Q6ZS46 218 aa9.9□□□□□ -0.83
GGPS1-202ENST00000358966 MTURNQ8N3F0 131 aa9.9□□□□□ -0.83
GGPS1-202ENST00000358966 TSKUQ8WUA8 353 aa9.9□□□□□ -0.83
GGPS1-202ENST00000358966 CITED1Q99966 193 aa9.9□□□□□ -0.83
GGPS1-202ENST00000358966 GGTLC3B5MD39 225 aa9.89□□□□□ -0.83
GGPS1-202ENST00000358966 H3BUX3 64 aa9.89□□□□□ -0.83
GGPS1-202ENST00000358966 ID1P41134 155 aa9.89□□□□□ -0.83
GGPS1-202ENST00000358966 UBE2L3P68036 154 aaKnown RBP9.89□□□□□ -0.83
GGPS1-202ENST00000358966 EBLN2Q6P2I7 272 aa9.89□□□□□ -0.83
GGPS1-202ENST00000358966 TECRQ9NZ01 308 aaKnown RBP9.89□□□□□ -0.83
GGPS1-202ENST00000358966 IGLV11-55A0A075B6I3 123 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms