RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ZNF492Q9P255 531 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 TRBV19A0A075B6N1 114 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 IGLV2-23P01705 113 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 COX8AP10176 69 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 SPANXN1Q5VSR9 72 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 TEX36Q5VZQ5 186 aa5.22□□□□□ -1.57
CSDE1-203ENST00000358528 BUB1B-PAK6H3BSN5 160 aa5.21□□□□□ -1.57
CSDE1-203ENST00000358528 CEACAM3P40198 252 aa5.21□□□□□ -1.57
CSDE1-203ENST00000358528 CDKN1BP46527 198 aa5.21□□□□□ -1.57
CSDE1-203ENST00000358528 ERCC8Q13216 396 aa5.21□□□□□ -1.57
CSDE1-203ENST00000358528 TMEM155Q4W5P6 130 aa5.21□□□□□ -1.57
CSDE1-203ENST00000358528 LCNL1Q6ZST4 164 aa5.21□□□□□ -1.57
CSDE1-203ENST00000358528 NEU4Q8WWR8 484 aaPredicted RBP5.21□□□□□ -1.57
CSDE1-203ENST00000358528 SCRT2Q9NQ03 307 aa5.21□□□□□ -1.57
CSDE1-203ENST00000358528 C21orf62Q9NYP8 219 aa5.21□□□□□ -1.57
CSDE1-203ENST00000358528 DKK2Q9UBU2 259 aa5.21□□□□□ -1.57
CSDE1-203ENST00000358528 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.21□□□□□ -1.58
CSDE1-203ENST00000358528 NPYP01303 97 aa5.21□□□□□ -1.58
CSDE1-203ENST00000358528 SMIM13P0DJ93 91 aa5.21□□□□□ -1.58
CSDE1-203ENST00000358528 RPL7P18124 248 aaKnown RBP5.21□□□□□ -1.58
CSDE1-203ENST00000358528 BMI1P35226 326 aa5.21□□□□□ -1.58
CSDE1-203ENST00000358528 MRPL51Q4U2R6 128 aaKnown RBP5.21□□□□□ -1.58
CSDE1-203ENST00000358528 FAM169BQ8N8A8 192 aa5.21□□□□□ -1.58
CSDE1-203ENST00000358528 NDUFA3O95167 84 aa5.21□□□□□ -1.58
CSDE1-203ENST00000358528 PRR30Q53SZ7 412 aaPredicted RBP5.21□□□□□ -1.58
CSDE1-203ENST00000358528 CT83Q5H943 113 aa5.21□□□□□ -1.58
CSDE1-203ENST00000358528 BCL6BQ8N143 479 aaPredicted RBP5.21□□□□□ -1.58
CSDE1-203ENST00000358528 MYOZ3Q8TDC0 251 aa5.21□□□□□ -1.58
CSDE1-203ENST00000358528 MLST8Q9BVC4 326 aa5.21□□□□□ -1.58
CSDE1-203ENST00000358528 GFRA4Q9GZZ7 299 aa5.21□□□□□ -1.58
CSDE1-203ENST00000358528 NCOR1P1Q9H4R4 102 aa5.21□□□□□ -1.58
CSDE1-203ENST00000358528 MSRB1Q9NZV6 116 aa5.21□□□□□ -1.58
CSDE1-203ENST00000358528 C19orf71A6NCJ1 209 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 E7EQL1 145 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 K7ERJ3 54 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 NBR2O15453 112 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 IGKV1-17P01599 117 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 MGPP08493 103 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 GATA1P15976 413 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-203ENST00000358528 SEC11AP67812 179 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 PLA2G2CQ5R387 149 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 HIST1H4GQ99525 98 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 SHANK2-AS3Q9BTD1 123 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 JKAMPQ9P055 326 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 DPM3Q9P2X0 92 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 DOPEY2Q9Y3R5 2298 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 K7EP13 123 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 KLF12Q9Y4X4 402 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 DMXL2Q8TDJ6 3036 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 RAI1Q7Z5J4 1906 aaPredicted RBP5.2□□□□□ -1.58
CSDE1-203ENST00000358528 SMAD7O15105 426 aaKnown RBP5.2□□□□□ -1.58
CSDE1-203ENST00000358528 SPRY2O43597 315 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 FOXC1Q12948 553 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 RNF182Q8N6D2 247 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 SMIM12Q96EX1 92 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 PRSS22Q9GZN4 317 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 C1RLQ9NZP8 487 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 LINC00527Q9UJ94 153 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 IGF2RP11717 2491 aa5.2□□□□□ -1.58
CSDE1-203ENST00000358528 IGHV3OR16-10A0A075B7F0 116 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 M0R381 172 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 GOSR1O95249 250 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 APOBEC3AP31941 199 aaPredicted RBP5.19□□□□□ -1.58
CSDE1-203ENST00000358528 HSD52Q0P140 79 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 SAMD5Q5TGI4 173 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 FAM104BQ5XKR9 115 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 SCGB1D4Q6XE38 83 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 VGLL1Q99990 258 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 ZC2HC1BQ5TFG8 222 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 Q6AWC8 147 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 PVRIGQ6DKI7 326 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 ZNF491Q8N8L2 437 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 ARPC1AQ92747 370 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 ADGRG4Q8IZF6 3080 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 FOXE3Q13461 319 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 TMEM78Q5T7P6 136 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 LINC01545Q5VT33 79 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 Q6ZS92 163 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 ARL6IP6Q8N6S5 226 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 NUP37Q8NFH4 326 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 OR1N2Q8NGR9 330 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 ZNF502Q8TBZ5 544 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 TMEM158Q8WZ71 300 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 RAB1BQ9H0U4 201 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 TACC2O95359 2948 aa5.19□□□□□ -1.58
CSDE1-203ENST00000358528 TRAV26-2A0A0B4J265 109 aa5.18□□□□□ -1.58
CSDE1-203ENST00000358528 TGFAP01135 160 aa5.18□□□□□ -1.58
CSDE1-203ENST00000358528 SMAGPQ0VAQ4 97 aa5.18□□□□□ -1.58
CSDE1-203ENST00000358528 CLEC19AQ6UXS0 136 aa5.18□□□□□ -1.58
CSDE1-203ENST00000358528 SIGLEC15Q6ZMC9 328 aa5.18□□□□□ -1.58
CSDE1-203ENST00000358528 GTSF1LQ9H1H1 148 aa5.18□□□□□ -1.58
CSDE1-203ENST00000358528 ZFHX4Q86UP3 3567 aa5.18□□□□□ -1.58
CSDE1-203ENST00000358528 LOC107984156A0A0G2JMH3 177 aa5.18□□□□□ -1.58
CSDE1-203ENST00000358528 A0A1B0GW15 77 aa5.18□□□□□ -1.58
CSDE1-203ENST00000358528 FABP5P3A8MUU1 101 aa5.18□□□□□ -1.58
CSDE1-203ENST00000358528 KALRNO60229 2985 aa5.18□□□□□ -1.58
CSDE1-203ENST00000358528 EGR2P11161 476 aaPredicted RBP5.18□□□□□ -1.58
CSDE1-203ENST00000358528 MYCNOSP40205 109 aa5.18□□□□□ -1.58
CSDE1-203ENST00000358528 SRSF9Q13242 221 aaKnown RBP eCLIP5.18□□□□□ -1.58
CSDE1-203ENST00000358528 ARL17AQ8IVW1 177 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms