RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 LYZL1Q6UWQ5 148 aa16.02■□□□□ 0.15
COL13A1-202ENST00000357811 AMN1Q8IY45 258 aa16.02■□□□□ 0.15
COL13A1-202ENST00000357811 NDFIP1Q9BT67 221 aa16.02■□□□□ 0.15
COL13A1-202ENST00000357811 SMKR1H3BMG3 65 aa16.01■□□□□ 0.15
COL13A1-202ENST00000357811 CHCHD1Q96BP2 118 aaKnown RBP16.01■□□□□ 0.15
COL13A1-202ENST00000357811 NPIPB5A8MRT5 1133 aa16.01■□□□□ 0.15
COL13A1-202ENST00000357811 F8W735 103 aaPredicted RBP16.01■□□□□ 0.15
COL13A1-202ENST00000357811 IFI27P40305 119 aaPredicted RBP16.01■□□□□ 0.15
COL13A1-202ENST00000357811 NBL1P41271 181 aa16.01■□□□□ 0.15
COL13A1-202ENST00000357811 NEU4Q8WWR8 484 aaPredicted RBP16.01■□□□□ 0.15
COL13A1-202ENST00000357811 MAP1LC3CQ9BXW4 147 aa16.01■□□□□ 0.15
COL13A1-202ENST00000357811 C21orf62Q9NYP8 219 aa16.01■□□□□ 0.15
COL13A1-202ENST00000357811 IGHV3-49A0A0A0MS15 119 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 MRPS12O15235 138 aaKnown RBP16■□□□□ 0.15
COL13A1-202ENST00000357811 NCR2O95944 276 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 MFAP4P55083 255 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 VMO1Q7Z5L0 202 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 LY6G5BQ8NDX9 201 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 AP5S1Q9NUS5 200 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 D6R8Y8 96 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 HOXB4P17483 251 aaPredicted RBP16■□□□□ 0.15
COL13A1-202ENST00000357811 CEACAM3P40198 252 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 RIGQ13278 110 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 FOXE3Q13461 319 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 WFDC3Q8IUB2 231 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 OR8A1Q8NGG7 326 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 RAXQ9Y2V3 346 aa16■□□□□ 0.15
COL13A1-202ENST00000357811 ZFP36P26651 326 aaKnown RBP15.99■□□□□ 0.15
COL13A1-202ENST00000357811 ADORA2A-AS1P86434 159 aa15.99■□□□□ 0.15
COL13A1-202ENST00000357811 VGLL1Q99990 258 aa15.99■□□□□ 0.15
COL13A1-202ENST00000357811 NUDT3O95989 172 aa15.99■□□□□ 0.15
COL13A1-202ENST00000357811 OR5AL1P0C617 328 aa15.99■□□□□ 0.15
COL13A1-202ENST00000357811 ECSCRQ19T08 205 aa15.99■□□□□ 0.15
COL13A1-202ENST00000357811 FA2HQ7L5A8 372 aa15.99■□□□□ 0.15
COL13A1-202ENST00000357811 OR11H6Q8NGC7 330 aa15.99■□□□□ 0.15
COL13A1-202ENST00000357811 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.98■□□□□ 0.15
COL13A1-202ENST00000357811 IGLV11-55A0A075B6I3 123 aa15.98■□□□□ 0.15
COL13A1-202ENST00000357811 SH2D1AO60880 128 aa15.98■□□□□ 0.15
COL13A1-202ENST00000357811 RNF5Q99942 180 aa15.98■□□□□ 0.15
COL13A1-202ENST00000357811 MRPS16Q9Y3D3 137 aaKnown RBP15.98■□□□□ 0.15
COL13A1-202ENST00000357811 WI2-2373I1.2A0A1W2PRP0 233 aa15.98■□□□□ 0.15
COL13A1-202ENST00000357811 TMEM189A5PLL7 270 aa15.98■□□□□ 0.15
COL13A1-202ENST00000357811 PPIFP30405 207 aaKnown RBP15.98■□□□□ 0.15
COL13A1-202ENST00000357811 PAX2Q02962 417 aa15.98■□□□□ 0.15
COL13A1-202ENST00000357811 TMEM191AQ9H0A3 160 aa15.98■□□□□ 0.15
COL13A1-202ENST00000357811 CST9LQ9H4G1 147 aa15.98■□□□□ 0.15
COL13A1-202ENST00000357811 FAM231BA6NCW3 169 aa15.97■□□□□ 0.15
COL13A1-202ENST00000357811 HSBP1L1C9JCN9 74 aa15.97■□□□□ 0.15
COL13A1-202ENST00000357811 CSN1S1P47710 185 aa15.97■□□□□ 0.15
COL13A1-202ENST00000357811 A0A087X0K7 114 aa15.96■□□□□ 0.15
COL13A1-202ENST00000357811 NDUFA3O95167 84 aa15.96■□□□□ 0.15
COL13A1-202ENST00000357811 PRTN3P24158 256 aa15.96■□□□□ 0.15
COL13A1-202ENST00000357811 GPR183P32249 361 aa15.96■□□□□ 0.15
COL13A1-202ENST00000357811 ZNF80P51504 273 aaPredicted RBP15.96■□□□□ 0.15
COL13A1-202ENST00000357811 OCIAD2Q56VL3 154 aa15.96■□□□□ 0.15
COL13A1-202ENST00000357811 TMEM11P17152 192 aa15.96■□□□□ 0.15
COL13A1-202ENST00000357811 FAM162BQ5T6X4 162 aa15.96■□□□□ 0.15
COL13A1-202ENST00000357811 ZNF562Q6V9R5 426 aa15.96■□□□□ 0.15
COL13A1-202ENST00000357811 A0A1W2PPR1 153 aa15.96■□□□□ 0.14
COL13A1-202ENST00000357811 ZNF207O43670 478 aaKnown RBP15.96■□□□□ 0.14
COL13A1-202ENST00000357811 ERCC8Q13216 396 aa15.96■□□□□ 0.14
COL13A1-202ENST00000357811 RNF182Q8N6D2 247 aa15.96■□□□□ 0.14
COL13A1-202ENST00000357811 NPBQ8NG41 125 aa15.96■□□□□ 0.14
COL13A1-202ENST00000357811 MSRB1Q9NZV6 116 aa15.96■□□□□ 0.14
COL13A1-202ENST00000357811 SELENOKQ9Y6D0 94 aa15.96■□□□□ 0.14
COL13A1-202ENST00000357811 EGR2P11161 476 aaPredicted RBP15.95■□□□□ 0.14
COL13A1-202ENST00000357811 C16orf54Q6UWD8 224 aa15.95■□□□□ 0.14
COL13A1-202ENST00000357811 CRXO43186 299 aaPredicted RBP15.95■□□□□ 0.14
COL13A1-202ENST00000357811 CTSGP08311 255 aa15.94■□□□□ 0.14
COL13A1-202ENST00000357811 TRAV30A0A087WSZ9 112 aa15.94■□□□□ 0.14
COL13A1-202ENST00000357811 PPBPP02775 128 aa15.94■□□□□ 0.14
COL13A1-202ENST00000357811 TWIST1Q15672 202 aa15.94■□□□□ 0.14
COL13A1-202ENST00000357811 SLC25A34Q6PIV7 304 aa15.94■□□□□ 0.14
COL13A1-202ENST00000357811 ODF3BA8MYP8 253 aa15.93■□□□□ 0.14
COL13A1-202ENST00000357811 HSPB8Q9UJY1 196 aa15.93■□□□□ 0.14
COL13A1-202ENST00000357811 SMAD5-AS1Q9Y6J3 95 aa15.93■□□□□ 0.14
COL13A1-202ENST00000357811 ORM1P02763 201 aa15.93■□□□□ 0.14
COL13A1-202ENST00000357811 LINC01548A6NM66 108 aa15.93■□□□□ 0.14
COL13A1-202ENST00000357811 SIGLEC8Q9NYZ4 499 aa15.93■□□□□ 0.14
COL13A1-202ENST00000357811 IGHV3OR16-10A0A075B7F0 116 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 PRAC2D3DTV9 90 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 GAS8-AS1O95177 125 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 AMMECR1LQ6DCA0 310 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 PRELID3AQ96N28 172 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 SRSF8Q9BRL6 282 aaKnown RBP15.92■□□□□ 0.14
COL13A1-202ENST00000357811 ZNF747Q9BV97 191 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 IGHV7-81A0A0B4J1V7 117 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 G3V318 75 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 LYPD1Q8N2G4 141 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 PRR25Q96S07 402 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 CSTL1Q9H114 145 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 ST20Q9HBF5 79 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 LINC00527Q9UJ94 153 aa15.92■□□□□ 0.14
COL13A1-202ENST00000357811 RIPPLY3P57055 190 aa15.91■□□□□ 0.14
COL13A1-202ENST00000357811 C15orf32Q32M92 178 aa15.91■□□□□ 0.14
COL13A1-202ENST00000357811 CLEC2AQ6UVW9 174 aa15.91■□□□□ 0.14
COL13A1-202ENST00000357811 ITPR1Q14643 2758 aa15.91■□□□□ 0.14
COL13A1-202ENST00000357811 CELSR2Q9HCU4 2923 aa15.91■□□□□ 0.14
COL13A1-202ENST00000357811 CLEC3BP05452 202 aa15.9■□□□□ 0.14
COL13A1-202ENST00000357811 RABAC1Q9UI14 185 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms