RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 PATE2Q6UY27 113 aa5.88□□□□□ -1.47
COL4A3BP-202ENST00000357457 C18orf15Q96N68 181 aa5.88□□□□□ -1.47
COL4A3BP-202ENST00000357457 ZNF331Q9NQX6 463 aaPredicted RBP5.88□□□□□ -1.47
COL4A3BP-202ENST00000357457 MCUBQ9NWR8 336 aa5.88□□□□□ -1.47
COL4A3BP-202ENST00000357457 STRAPQ9Y3F4 350 aaKnown RBP5.88□□□□□ -1.47
COL4A3BP-202ENST00000357457 A0A096LPF7 62 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 GAGE12BA1L429 117 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 K7EPK0 472 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 GAGE7O76087 117 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 RLN2P04090 185 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 GAGE12FP0CL80 117 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 GAGE12GP0CL81 117 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 GAGE12IP0CL82 117 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 GFI1BQ5VTD9 330 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 S100A7AQ86SG5 101 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 CCDC28AQ8IWP9 274 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 ZBTB8BQ8NAP8 495 aaPredicted RBP5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 LRRC20Q8TCA0 184 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 VSIG2Q96IQ7 327 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 RSL24D1Q9UHA3 163 aaKnown RBP5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 RNF24Q9Y225 148 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 UBR4Q5T4S7 5183 aa5.87□□□□□ -1.47
COL4A3BP-202ENST00000357457 SNURFLB1AK76 121 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 PRAC2D3DTV9 90 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 FNDC10F2Z333 226 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 SIVA1O15304 175 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 PAX4O43316 350 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 SFT2D2O95562 160 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 OR5G3P0C626 314 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 LINC00869P0C866 280 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 SMIM18P0DKX4 95 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 SPCS2Q15005 226 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 PXDC1Q5TGL8 231 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 LCN15Q6UWW0 184 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 CCDC190Q86UF4 302 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 ZNF431Q8TF32 576 aaPredicted RBP5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 ARV1Q9H2C2 271 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 NPVFQ9HCQ7 196 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 PTTG2Q9NZH5 202 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 FAT3Q8TDW7 4589 aa5.86□□□□□ -1.47
COL4A3BP-202ENST00000357457 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 LRP1Q07954 4544 aaKnown RBP5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 H3BP45 60 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 HOXB5P09067 269 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 CT45A10P0DMU9 189 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 PRB4P10163 310 aaPredicted RBP5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 FUSP35637 526 aaKnown RBP eCLIP5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 KRTAP10-1P60331 282 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 POLR2GP62487 172 aaKnown RBP eCLIP5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 Q5VSD8 79 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 TMEM14EPQ6UXP3 125 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 Q6ZTI0 123 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 TMED4Q7Z7H5 227 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 DYNC2LI1Q8TCX1 351 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 FRZBQ92765 325 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 RAB24Q969Q5 203 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 SAT2Q96F10 170 aaPredicted RBP5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 SMIM8Q96KF7 97 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 ODF3Q96PU9 254 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 SLC25A21Q9BQT8 299 aaPredicted RBP5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 PYGO2Q9BRQ0 406 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 SLC50A1Q9BRV3 221 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 PARD6GQ9BYG4 376 aaPredicted RBP5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 ARL6Q9H0F7 186 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 TMPRSS5Q9H3S3 457 aa5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 CCDC59Q9P031 241 aaKnown RBP5.85□□□□□ -1.47
COL4A3BP-202ENST00000357457 SMCO3A2RU48 225 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 FABP12A6NFH5 140 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 ANXA7P20073 488 aaKnown RBP5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 TNFSF8P32971 234 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 FAUP35544 74 aaKnown RBP5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 ERVFC1-1P60608 527 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 PPP1R1AQ13522 171 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 TEPPQ6URK8 271 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 LINC00305Q7Z4B0 112 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 NFE4Q86UQ8 179 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 BPIFA4PQ86YQ2 179 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 C11orf72Q8NBR9 251 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 LINC00467Q9BRT7 94 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 PSENENQ9NZ42 101 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 TNFRSF18Q9Y5U5 241 aa5.84□□□□□ -1.47
COL4A3BP-202ENST00000357457 A0A087WTM6 91 aa5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 TRAV12-3A0A0B4J271 114 aa5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 LINC00854A0A1B0GVQ3 168 aa5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 SLC17A3O00476 420 aa5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 ZNF324O75467 553 aaPredicted RBP5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 CCNKO75909 580 aa5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 SNRPCP09234 159 aaKnown RBP5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 IGLC2P0DOY2 106 aa5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 UBE2MP61081 183 aaKnown RBP5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 ANXA2RQ3ZCQ2 193 aa5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 DEDD2Q8WXF8 326 aa5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 TMEM37Q8WXS4 190 aa5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 SLIRPQ9GZT3 109 aaKnown RBP5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 PXMP4Q9Y6I8 212 aa5.83□□□□□ -1.48
COL4A3BP-202ENST00000357457 TRGV2A0A075B6R0 118 aa5.82□□□□□ -1.48
COL4A3BP-202ENST00000357457 KRTAP4-8A0A0G2JLE6 195 aa5.82□□□□□ -1.48
COL4A3BP-202ENST00000357457 NPIPB6E9PJ23 425 aa5.82□□□□□ -1.48
COL4A3BP-202ENST00000357457 H3BQ15 152 aa5.82□□□□□ -1.48
COL4A3BP-202ENST00000357457 K7EP13 123 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms