RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 LY6G6EA0A0G2JKS1 128 aa5.83□□□□□ -1.48
VPS13A-202ENST00000357409 APOC4P55056 127 aa5.83□□□□□ -1.48
VPS13A-202ENST00000357409 C5orf47Q569G3 176 aa5.83□□□□□ -1.48
VPS13A-202ENST00000357409 U3KQA8 63 aa5.83□□□□□ -1.48
VPS13A-202ENST00000357409 DOCK6Q96HP0 2047 aa5.83□□□□□ -1.48
VPS13A-202ENST00000357409 NHSL1Q5SYE7 1610 aa5.83□□□□□ -1.48
VPS13A-202ENST00000357409 LINC00271P0C7V0 271 aa5.83□□□□□ -1.48
VPS13A-202ENST00000357409 DAND5Q8N907 189 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 TM2D2Q9BX73 214 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 TDRD15B5MCY1 1934 aaKnown RBP5.82□□□□□ -1.48
VPS13A-202ENST00000357409 TRAV9-2A0A087WT02 112 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 M0R1W7 72 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 PRM2P04554 102 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 HRCT1Q6UXD1 115 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 TSKUQ8WUA8 353 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 ADORA2A-AS1P86434 159 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 C1QTNF4Q9BXJ3 329 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 MORN3Q6PF18 240 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-202ENST00000357409 CFHR4Q92496 578 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 COX11Q9Y6N1 276 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 ALPK2Q86TB3 2170 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 IGLL1P15814 213 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 RNF138Q8WVD3 245 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 CHD3Q12873 2000 aaKnown RBP5.82□□□□□ -1.48
VPS13A-202ENST00000357409 IGKV1-6A0A0C4DH72 117 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 LINC00587B1AMM8 73 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 COPS9Q8WXC6 57 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 RNF183Q96D59 192 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 TIMM21Q9BVV7 248 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 LOXP28300 417 aaPredicted RBP5.82□□□□□ -1.48
VPS13A-202ENST00000357409 MPV17L2Q567V2 206 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 FBLIM1Q8WUP2 373 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 FANCD2OSQ96PS1 177 aa5.82□□□□□ -1.48
VPS13A-202ENST00000357409 F2Z2F3 143 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 IGHG3P01860 377 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 FAM215AQ9Y5M1 114 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 ZNF318Q5VUA4 2279 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 MIA3Q5JRA6 1907 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 IGHV1OR15-1A0A075B7D0 117 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 A0A0J9YWU9 116 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 CTSGP08311 255 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 LMO1P25800 156 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 C9orf139Q6ZV77 190 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 TMEM170AQ8WVE7 144 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 COL11A2P13942 1736 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-202ENST00000357409 A8MWV9 139 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 STAG3L3P0CL85 134 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 SMIM6P0DI80 62 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 C3orf79P0CE67 100 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 CENPVL3A0A0U1RRI6 287 aa5.81□□□□□ -1.48
VPS13A-202ENST00000357409 PSMG3Q9BT73 122 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-202ENST00000357409 TSSC4Q9Y5U2 329 aaPredicted RBP5.81□□□□□ -1.48
VPS13A-202ENST00000357409 COL11A1P12107 1806 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-202ENST00000357409 FAM223BA6NKX1 122 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 LY6G6CO95867 125 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 FAM223AQ8IWN6 122 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 USMG5Q96IX5 58 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 Q6ZVH6 145 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 FAM231DQ6ZW35 169 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 A0A1B0GW64 132 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 ZFC3H1O60293 1989 aaKnown RBP5.8□□□□□ -1.48
VPS13A-202ENST00000357409 ATXN8Q156A1 80 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 C17orf82Q86X59 251 aaPredicted RBP5.8□□□□□ -1.48
VPS13A-202ENST00000357409 LY75O60449 1722 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 KLK12Q9UKR0 248 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 MYO16Q9Y6X6 1858 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 TRBV9A0A0B4J1U6 114 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 LEPROTO15243 131 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 TRBV12-3P01733 135 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 MAJINQ3KP22 176 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 TMEM243Q9BU79 118 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 KIAA1217Q5T5P2 1943 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 LINC01549A6NIU2 74 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 GYPEP15421 78 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 TNFRSF14Q92956 283 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 ANAPC13Q9BS18 74 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 TET1Q8NFU7 2136 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 FGF16O43320 207 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 OSTCQ9NRP0 149 aa5.8□□□□□ -1.48
VPS13A-202ENST00000357409 LYL1P12980 280 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 TMEM30BQ3MIR4 351 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 COL18A1P39060 1754 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 HEATR5BQ9P2D3 2071 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 RPL39LQ96EH5 51 aaKnown RBP5.79□□□□□ -1.48
VPS13A-202ENST00000357409 GPHB5Q86YW7 130 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 SCN5AQ14524 2016 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 CHAC1Q9BUX1 264 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 CYTL1Q9NRR1 136 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 LBHQ53QV2 105 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-202ENST00000357409 CEMP1Q6PRD7 247 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-202ENST00000357409 CDKN1BP46527 198 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 OTOFQ9HC10 1997 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 SDHAF1A6NFY7 115 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 C9JQL5 133 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 P0DMU3 169 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 FAM231AP0DMU4 169 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 FAM231CP0DMU5 169 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 CCL18P55774 89 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 C10orf99Q6UWK7 81 aa5.79□□□□□ -1.48
VPS13A-202ENST00000357409 DKK2Q9UBU2 259 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms