RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 RMI2Q96E14 147 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 TMEM243Q9BU79 118 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 SCRT2Q9NQ03 307 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 IGHV2-70DA0A0C4DH43 119 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 KLF5Q13887 457 aaPredicted RBP10.37□□□□□ -0.75
SMC4-202ENST00000357388 PRR31Q5SQ13 230 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 DAZ1Q9NQZ3 744 aaKnown RBP10.37□□□□□ -0.75
SMC4-202ENST00000357388 SHISA9B4DS77 424 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 BUB1B-PAK6H3BSN5 160 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 EGR2P11161 476 aaPredicted RBP10.37□□□□□ -0.75
SMC4-202ENST00000357388 BRD3OSQ6XYD6 125 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 MSRB2Q9Y3D2 182 aa10.37□□□□□ -0.75
SMC4-202ENST00000357388 ESPL1Q14674 2120 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 PINLYPA6NC86 204 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 KLRD1Q13241 179 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 C11orf52Q96A22 123 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 SIGLEC8Q9NYZ4 499 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 RGPD3A6NKT7 1758 aaPredicted RBP10.36□□□□□ -0.75
SMC4-202ENST00000357388 FGFBP3Q8TAT2 258 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 WIPF2Q8TF74 440 aaPredicted RBP10.36□□□□□ -0.75
SMC4-202ENST00000357388 SMIM2Q9BVW6 85 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 RHPN1-AS1Q9BWJ2 59 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 PNRC2Q9NPJ4 139 aaKnown RBP10.36□□□□□ -0.75
SMC4-202ENST00000357388 MRPL35Q9NZE8 188 aaKnown RBP10.36□□□□□ -0.75
SMC4-202ENST00000357388 KIAA1217Q5T5P2 1943 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 TNS1Q9HBL0 1735 aaKnown RBP10.36□□□□□ -0.75
SMC4-202ENST00000357388 IGHV3-53P01767 116 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 SP5Q6BEB4 398 aaPredicted RBP10.36□□□□□ -0.75
SMC4-202ENST00000357388 PRSS57Q6UWY2 283 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 HS3ST6Q96QI5 342 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 ORMDL1Q9P0S3 153 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 CASP8AP2Q9UKL3 1982 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 A0A1B0GUS0 222 aa10.36□□□□□ -0.75
SMC4-202ENST00000357388 TRBV19A0A075B6N1 114 aa10.35□□□□□ -0.75
SMC4-202ENST00000357388 F6UB75 175 aa10.35□□□□□ -0.75
SMC4-202ENST00000357388 TDRD6O60522 2096 aaKnown RBP10.35□□□□□ -0.75
SMC4-202ENST00000357388 TRAV25A0A0B4J276 109 aa10.35□□□□□ -0.75
SMC4-202ENST00000357388 MBD3L4A6NDZ8 208 aaPredicted RBP10.35□□□□□ -0.75
SMC4-202ENST00000357388 MBD3L3A6NE82 208 aaPredicted RBP10.35□□□□□ -0.75
SMC4-202ENST00000357388 SDHAF1A6NFY7 115 aa10.35□□□□□ -0.75
SMC4-202ENST00000357388 MBD3L5A6NJ08 208 aaPredicted RBP10.35□□□□□ -0.75
SMC4-202ENST00000357388 TFF1P04155 84 aa10.35□□□□□ -0.75
SMC4-202ENST00000357388 MBD3L2Q8NHZ7 208 aaPredicted RBP10.35□□□□□ -0.75
SMC4-202ENST00000357388 A0A0G2JRQ6 117 aa10.35□□□□□ -0.75
SMC4-202ENST00000357388 A0A0B4J2C4 111 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 A0A0G2JNJ9 132 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 IGHG2P01859 326 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 UBE2E2Q96LR5 201 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 GAFA1Q96PS6 74 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 Q9UFV3 132 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 PTPRFP10586 1907 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 DAD1P61803 113 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 LINC00479Q96M42 142 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 TRIOBPQ9H2D6 2365 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 PRSS47A8MTI9 375 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 DEFB130BP0DP73 79 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 DEFB130AP0DP74 79 aa10.34□□□□□ -0.75
SMC4-202ENST00000357388 C5orf47Q569G3 176 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 Q6ZS92 163 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 FOXL2NBQ6ZUU3 175 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 THSD7AQ9UPZ6 1657 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 MSMBP08118 114 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 BAALC-AS2P0C853 105 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 NDPQ00604 133 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 Q6ZRM9 215 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 FAM110DQ8TAY7 271 aaPredicted RBP10.33□□□□□ -0.76
SMC4-202ENST00000357388 TMEM14BQ9NUH8 114 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 CKAP5Q14008 2032 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 K7ERJ3 54 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 PFN2P35080 140 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 APOC4P55056 127 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 HERV-K104P63124 156 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 NDUFS7O75251 213 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 SPATA25Q9BR10 227 aa10.33□□□□□ -0.76
SMC4-202ENST00000357388 KLF2Q9Y5W3 355 aaPredicted RBP10.33□□□□□ -0.76
SMC4-202ENST00000357388 COA6Q5JTJ3 125 aaKnown RBP10.32□□□□□ -0.76
SMC4-202ENST00000357388 GGNQ86UU5 652 aa10.32□□□□□ -0.76
SMC4-202ENST00000357388 C8orf49Q96NF6 230 aa10.32□□□□□ -0.76
SMC4-202ENST00000357388 GBF1Q92538 1859 aa10.32□□□□□ -0.76
SMC4-202ENST00000357388 COL11A1P12107 1806 aaPredicted RBP10.32□□□□□ -0.76
SMC4-202ENST00000357388 TRAV12-1A0A0B4J245 112 aa10.32□□□□□ -0.76
SMC4-202ENST00000357388 J3QKU1 62 aa10.32□□□□□ -0.76
SMC4-202ENST00000357388 RHOHQ15669 191 aa10.32□□□□□ -0.76
SMC4-202ENST00000357388 THAP8Q8NA92 274 aa10.32□□□□□ -0.76
SMC4-202ENST00000357388 ATP5G1P05496 136 aa10.32□□□□□ -0.76
SMC4-202ENST00000357388 FLVCR1-AS1Q8TAF5 88 aa10.32□□□□□ -0.76
SMC4-202ENST00000357388 DOPEY2Q9Y3R5 2298 aa10.32□□□□□ -0.76
SMC4-202ENST00000357388 IGHV1OR15-1A0A075B7D0 117 aa10.32□□□□□ -0.76
SMC4-202ENST00000357388 PRR25Q96S07 402 aa10.31□□□□□ -0.76
SMC4-202ENST00000357388 BPESC1Q9GZL8 116 aa10.31□□□□□ -0.76
SMC4-202ENST00000357388 AKAP6Q13023 2319 aa10.31□□□□□ -0.76
SMC4-202ENST00000357388 OTOFQ9HC10 1997 aa10.31□□□□□ -0.76
SMC4-202ENST00000357388 F5H768 121 aa10.31□□□□□ -0.76
SMC4-202ENST00000357388 DEFB104AQ8WTQ1 72 aa10.31□□□□□ -0.76
SMC4-202ENST00000357388 hADV29S1A0JD25 119 aa10.31□□□□□ -0.76
SMC4-202ENST00000357388 RNF223E7ERA6 249 aa10.31□□□□□ -0.76
SMC4-202ENST00000357388 LINC01619G3V211 115 aa10.31□□□□□ -0.76
SMC4-202ENST00000357388 H0YGX0 51 aa10.31□□□□□ -0.76
SMC4-202ENST00000357388 ZNF493Q6ZR52 646 aa10.31□□□□□ -0.76
SMC4-202ENST00000357388 Q6ZVH6 145 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms