RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 TSSC4Q9Y5U2 329 aaPredicted RBP9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 SH2D1AO60880 128 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 LINC01559Q495D7 138 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 ATP6V0BQ99437 205 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 CNFNQ9BYD5 112 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 C16orf97H3BN30 126 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 CNTFRP26992 372 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 PDE6HQ13956 83 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 RASL11BQ9BPW5 248 aa9.5□□□□□ -0.89
SMARCAL1-201ENST00000357276 PRRC2CQ9Y520 2896 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-201ENST00000357276 IGLL5B9A064 214 aa9.49□□□□□ -0.89
SMARCAL1-201ENST00000357276 FCER1GP30273 86 aa9.49□□□□□ -0.89
SMARCAL1-201ENST00000357276 SMAGPQ0VAQ4 97 aa9.49□□□□□ -0.89
SMARCAL1-201ENST00000357276 CCDC144NLQ6NUI1 221 aa9.49□□□□□ -0.89
SMARCAL1-201ENST00000357276 PRO0461Q9UI25 63 aa9.49□□□□□ -0.89
SMARCAL1-201ENST00000357276 SMKR1H3BMG3 65 aa9.49□□□□□ -0.89
SMARCAL1-201ENST00000357276 CKS2P33552 79 aa9.49□□□□□ -0.89
SMARCAL1-201ENST00000357276 WFDC2Q14508 124 aa9.49□□□□□ -0.89
SMARCAL1-201ENST00000357276 ZNF491Q8N8L2 437 aa9.49□□□□□ -0.89
SMARCAL1-201ENST00000357276 TTTY13Q9BZ97 58 aa9.49□□□□□ -0.89
SMARCAL1-201ENST00000357276 A0A1B0GV72 72 aa9.48□□□□□ -0.89
SMARCAL1-201ENST00000357276 M0R3E3 92 aa9.48□□□□□ -0.89
SMARCAL1-201ENST00000357276 APELAP0DMC3 54 aa9.48□□□□□ -0.89
SMARCAL1-201ENST00000357276 SRSF2Q01130 221 aaKnown RBP9.48□□□□□ -0.89
SMARCAL1-201ENST00000357276 TAL2Q16559 108 aa9.48□□□□□ -0.89
SMARCAL1-201ENST00000357276 ASCL5Q7RTU5 278 aa9.48□□□□□ -0.89
SMARCAL1-201ENST00000357276 NUP37Q8NFH4 326 aa9.48□□□□□ -0.89
SMARCAL1-201ENST00000357276 K7EIM0 57 aa9.48□□□□□ -0.89
SMARCAL1-201ENST00000357276 IGKCP01834 107 aa9.48□□□□□ -0.89
SMARCAL1-201ENST00000357276 TMEM155Q4W5P6 130 aa9.48□□□□□ -0.89
SMARCAL1-201ENST00000357276 SPAG8Q99932 426 aaPredicted RBP9.48□□□□□ -0.89
SMARCAL1-201ENST00000357276 EGR2P11161 476 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-201ENST00000357276 LOXP28300 417 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-201ENST00000357276 C22orf34Q6ZV56 151 aa9.47□□□□□ -0.89
SMARCAL1-201ENST00000357276 PPP1R27Q86WC6 154 aa9.47□□□□□ -0.89
SMARCAL1-201ENST00000357276 IGHV1-8P0DP01 117 aa9.47□□□□□ -0.89
SMARCAL1-201ENST00000357276 TCTEX1D4Q5JR98 221 aa9.47□□□□□ -0.89
SMARCAL1-201ENST00000357276 FDCSPQ8NFU4 85 aa9.47□□□□□ -0.89
SMARCAL1-201ENST00000357276 ZNF502Q8TBZ5 544 aa9.47□□□□□ -0.89
SMARCAL1-201ENST00000357276 SRSF8Q9BRL6 282 aaKnown RBP9.47□□□□□ -0.89
SMARCAL1-201ENST00000357276 NHP2Q9NX24 153 aaKnown RBP9.47□□□□□ -0.89
SMARCAL1-201ENST00000357276 ZFHX4Q86UP3 3567 aa9.47□□□□□ -0.89
SMARCAL1-201ENST00000357276 IGHV3-72A0A0B4J1Y9 119 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 TMEM238LA0A1B0GVL6 79 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 A0A1B0GWB2 263 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 NPIPB5A8MRT5 1133 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 J3QR89 54 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 WFDC3Q8IUB2 231 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 CLUHP3Q96NS8 147 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 MAP1LC3AQ9H492 121 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 SVILO95425 2214 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 IGLV2-18A0A075B6J9 118 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 ENSAO43768 121 aaKnown RBP9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 RBP4P02753 201 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 LEPP41159 167 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 CCL8P80075 99 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 LYPD2Q6UXB3 125 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 RNF125Q96EQ8 232 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 PRR25Q96S07 402 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 CTSZQ9UBR2 303 aa9.46□□□□□ -0.89
SMARCAL1-201ENST00000357276 CFAP47Q6ZTR5 3102 aa9.46□□□□□ -0.9
SMARCAL1-201ENST00000357276 TMSB15BA0A087X1C1 80 aa9.46□□□□□ -0.9
SMARCAL1-201ENST00000357276 TMEM178BH3BS89 294 aa9.46□□□□□ -0.9
SMARCAL1-201ENST00000357276 GAS8-AS1O95177 125 aa9.46□□□□□ -0.9
SMARCAL1-201ENST00000357276 KLF17Q5JT82 389 aaPredicted RBP9.46□□□□□ -0.9
SMARCAL1-201ENST00000357276 NXT2Q9NPJ8 142 aaKnown RBP9.46□□□□□ -0.9
SMARCAL1-201ENST00000357276 SMG1Q96Q15 3661 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 IGLV1-47P01700 117 aa9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 PRB4P10163 310 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 CD40P25942 277 aa9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 C17orf100A8MU93 164 aa9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 LINC01619G3V211 115 aa9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 ZNF207O43670 478 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 ATP5LO75964 103 aa9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 DPM2O94777 84 aa9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 ZNF80P51504 273 aaPredicted RBP9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 TWIST1Q15672 202 aa9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 C12orf74Q32Q52 190 aa9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 MAPKAPK5-AS1Q8N8E1 139 aa9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 ZNF479Q96JC4 524 aa9.45□□□□□ -0.9
SMARCAL1-201ENST00000357276 TRAV17A0A0B4J275 112 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 PRSS47A8MTI9 375 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 KAAG1Q9UBP8 84 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 LOC400499M0QZD8 3231 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 NDUFB3O43676 98 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 SRSF6Q13247 344 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 ZC2HC1BQ5TFG8 222 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 GTSCR1Q86UQ5 136 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 FAM215AQ9Y5M1 114 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 PLCE1Q9P212 2302 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 H3BMG7 143 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 TNFRSF6BO95407 300 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 PLGLAQ15195 96 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 Q6ZS92 163 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 SH2D6Q7Z4S9 175 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 ARPC1AQ92747 370 aa9.44□□□□□ -0.9
SMARCAL1-201ENST00000357276 IGHV1-3A0A0C4DH29 117 aa9.43□□□□□ -0.9
SMARCAL1-201ENST00000357276 TMEM8BA6NDV4 472 aa9.43□□□□□ -0.9
SMARCAL1-201ENST00000357276 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-201ENST00000357276 ETDBQ3ZM63 59 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms