RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZFAND6Q6FIF0 208 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 LIME1Q9H400 295 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 KLK9Q9UKQ9 250 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 TSSC4Q9Y5U2 329 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-202ENST00000356435 IGHV1OR15-1A0A075B7D0 117 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 CD55P08174 381 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 ZNF664Q8N3J9 261 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 OCC1Q8TAD7 63 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 GAGE12BA1L429 117 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 EFNA2O43921 213 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 GAGE7O76087 117 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 GAGE12FP0CL80 117 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 GAGE12GP0CL81 117 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 GAGE12IP0CL82 117 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 ANXA2RQ3ZCQ2 193 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 E7EQL1 145 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 PRR30Q53SZ7 412 aaPredicted RBP4.48□□□□□ -1.69
PTPRD-202ENST00000356435 MAPK1IP1LQ8NDC0 245 aa4.48□□□□□ -1.69
PTPRD-202ENST00000356435 NDUFA4O00483 81 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 IGFL3Q6UXB1 125 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 RTTNQ86VV8 2226 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 ETV2O00321 342 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-202ENST00000356435 LYPD2Q6UXB3 125 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 ELANEP08246 267 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 YPEL3P61236 119 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-202ENST00000356435 MRAPQ8TCY5 172 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 ZNF625Q96I27 306 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-202ENST00000356435 MEGF9Q9H1U4 602 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 ARID1AO14497 2285 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 PRB4P10163 310 aaPredicted RBP4.47□□□□□ -1.69
PTPRD-202ENST00000356435 ESDP10768 282 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 TP53TG1Q9Y2A0 90 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 A0A1B0GUS0 222 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 NDUFS5O43920 106 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 CDKN1BP46527 198 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 IGKV2D-24A0A075B6R9 120 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 TRAV3A0A0B4J244 114 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 FNDC10F2Z333 226 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 H3BUA1 57 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 TIRAPP58753 221 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 SRSF2Q01130 221 aaKnown RBP4.47□□□□□ -1.69
PTPRD-202ENST00000356435 IGFL4Q6B9Z1 124 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 VSIRQ9H7M9 311 aa4.47□□□□□ -1.69
PTPRD-202ENST00000356435 GAGE2BQ13066 116 aa4.46□□□□□ -1.69
PTPRD-202ENST00000356435 GAGE6Q13070 117 aa4.46□□□□□ -1.69
PTPRD-202ENST00000356435 IGKV1-27A0A075B6S5 117 aa4.46□□□□□ -1.69
PTPRD-202ENST00000356435 SPINK13Q1W4C9 94 aa4.46□□□□□ -1.69
PTPRD-202ENST00000356435 C9orf66Q5T8R8 295 aa4.46□□□□□ -1.69
PTPRD-202ENST00000356435 WFDC1Q9HC57 220 aa4.46□□□□□ -1.69
PTPRD-202ENST00000356435 DENND4AQ7Z401 1863 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 A0A0A6YYD4 124 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 SMIM2Q9BVW6 85 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 TRAV25A0A0B4J276 109 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 IGKV1-12A0A0C4DH73 117 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 IGKV1D-12P01611 117 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 RHOHQ15669 191 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 DEFB104AQ8WTQ1 72 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 SIGMAR1Q99720 223 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 VPREB3Q9UKI3 123 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 TCTEX1D4Q5JR98 221 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 ZNF319Q9P2F9 582 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 CNOT1A5YKK6 2376 aaKnown RBP4.46□□□□□ -1.7
PTPRD-202ENST00000356435 SPTBP11277 2137 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 A0A087WV48 116 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 TRAV8-1A0A0A6YYK1 113 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 IGHV3-16A0A0C4DH30 117 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 WIPF3A6NGB9 483 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 GUSBP1Q15486 140 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 LY6HO94772 140 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 BCL6BQ8N143 479 aaPredicted RBP4.46□□□□□ -1.7
PTPRD-202ENST00000356435 IGF2BP2-AS1Q96M15 143 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 HS3ST6Q96QI5 342 aa4.46□□□□□ -1.7
PTPRD-202ENST00000356435 MRPL27Q9P0M9 148 aaKnown RBP4.46□□□□□ -1.7
PTPRD-202ENST00000356435 IGHV1-24A0A0C4DH33 117 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 KNCNA6PVL3 124 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 TAL2Q16559 108 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 SH2D6Q7Z4S9 175 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 SCRT2Q9NQ03 307 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 PFN2P35080 140 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 FOXG1P55316 489 aaPredicted RBP4.45□□□□□ -1.7
PTPRD-202ENST00000356435 Q6P435 159 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 NUP35Q8NFH5 326 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 DOPEY2Q9Y3R5 2298 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 UNC13CQ8NB66 2214 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 IGKV1OR2-108A0A075B7D4 117 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 LINC00473A8K010 186 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 ZNF134P52741 427 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 TMEM14EPQ6UXP3 125 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 C17orf82Q86X59 251 aaPredicted RBP4.45□□□□□ -1.7
PTPRD-202ENST00000356435 KLK5Q9Y337 293 aaPredicted RBP4.45□□□□□ -1.7
PTPRD-202ENST00000356435 ACACAQ13085 2346 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 THSD7BQ9C0I4 1608 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 PTPRDP23468 1912 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 RNASE2P10153 161 aaKnown RBP4.45□□□□□ -1.7
PTPRD-202ENST00000356435 B3GALT5-AS1P59052 145 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 HERVK_113P63121 156 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 RPL18AQ02543 176 aaKnown RBP4.45□□□□□ -1.7
PTPRD-202ENST00000356435 FOXI2Q6ZQN5 318 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 IL17DQ8TAD2 202 aa4.45□□□□□ -1.7
PTPRD-202ENST00000356435 DSCR8Q96T75 97 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms