RNA–Protein interactions for RNA: ENST00000355653.7

VAT1-201, Transcript of vesicle amine transport 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-201ENST00000355653 DEFB124Q8NES8 71 aa12.01□□□□□ -0.49
VAT1-201ENST00000355653 IGKV2D-26A0A0A0MRZ7 120 aa12.01□□□□□ -0.49
VAT1-201ENST00000355653 I3L2K1 104 aa12.01□□□□□ -0.49
VAT1-201ENST00000355653 LOXP28300 417 aaPredicted RBP12.01□□□□□ -0.49
VAT1-201ENST00000355653 RBPJQ06330 500 aa12.01□□□□□ -0.49
VAT1-201ENST00000355653 C1orf185Q5T7R7 199 aa12.01□□□□□ -0.49
VAT1-201ENST00000355653 PRSS33Q8NF86 280 aa12.01□□□□□ -0.49
VAT1-201ENST00000355653 PPIAL4CA0A0B4J2A2 164 aa12□□□□□ -0.49
VAT1-201ENST00000355653 PPIAL4GP0DN37 164 aa12□□□□□ -0.49
VAT1-201ENST00000355653 U3KQK5 164 aa12□□□□□ -0.49
VAT1-201ENST00000355653 TMEM178BH3BS89 294 aa12□□□□□ -0.49
VAT1-201ENST00000355653 CNIH1O95406 144 aa12□□□□□ -0.49
VAT1-201ENST00000355653 IGKV2-40A0A087WW87 121 aaPredicted RBP11.99□□□□□ -0.49
VAT1-201ENST00000355653 H3BRN7 92 aa11.99□□□□□ -0.49
VAT1-201ENST00000355653 IGKV2D-40P01614 121 aaPredicted RBP11.99□□□□□ -0.49
VAT1-201ENST00000355653 GTSF1LQ9H1H1 148 aa11.99□□□□□ -0.49
VAT1-201ENST00000355653 ADIPOQQ15848 244 aa11.99□□□□□ -0.49
VAT1-201ENST00000355653 RNF125Q96EQ8 232 aa11.99□□□□□ -0.49
VAT1-201ENST00000355653 AAMDCQ9H7C9 122 aa11.99□□□□□ -0.49
VAT1-201ENST00000355653 ZNF207O43670 478 aaKnown RBP11.98□□□□□ -0.49
VAT1-201ENST00000355653 PRSS1P07477 247 aa11.98□□□□□ -0.49
VAT1-201ENST00000355653 PAX8Q06710 450 aa11.98□□□□□ -0.49
VAT1-201ENST00000355653 Q8TAT8 98 aa11.98□□□□□ -0.49
VAT1-201ENST00000355653 PCNX1Q96RV3 2341 aa11.98□□□□□ -0.49
VAT1-201ENST00000355653 CRYGBP07316 175 aa11.98□□□□□ -0.49
VAT1-201ENST00000355653 COX7A1P24310 79 aa11.98□□□□□ -0.49
VAT1-201ENST00000355653 ZNF491Q8N8L2 437 aa11.98□□□□□ -0.49
VAT1-201ENST00000355653 NHP2Q9NX24 153 aaKnown RBP11.98□□□□□ -0.49
VAT1-201ENST00000355653 IGHV1-3A0A0C4DH29 117 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 WI2-2373I1.2A0A1W2PRP0 233 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 GAS8-AS1O95177 125 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 FTH1P19P0C7X4 201 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 LEPP41159 167 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 DLX6P56179 175 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 TMEM155Q4W5P6 130 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 KLF17Q5JT82 389 aaPredicted RBP11.97□□□□□ -0.49
VAT1-201ENST00000355653 TMEM108Q6UXF1 575 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 C8orf31Q8N9H6 132 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 CHAC1Q9BUX1 264 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 MSRB1Q9NZV6 116 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 NPIPB5A8MRT5 1133 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 EVI2AP22794 236 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 SMAGPQ0VAQ4 97 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 C3orf36Q3SXR2 165 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 GTSCR1Q86UQ5 136 aa11.97□□□□□ -0.49
VAT1-201ENST00000355653 EGR2P11161 476 aaPredicted RBP11.96□□□□□ -0.49
VAT1-201ENST00000355653 IGFL4Q6B9Z1 124 aa11.96□□□□□ -0.49
VAT1-201ENST00000355653 LYPD1Q8N2G4 141 aa11.96□□□□□ -0.49
VAT1-201ENST00000355653 K7EIM0 57 aa11.96□□□□□ -0.49
VAT1-201ENST00000355653 K7EM74 188 aa11.96□□□□□ -0.49
VAT1-201ENST00000355653 SMIM17P0DL12 118 aa11.96□□□□□ -0.49
VAT1-201ENST00000355653 AZU1P20160 251 aa11.96□□□□□ -0.49
VAT1-201ENST00000355653 TTC28Q96AY4 2481 aa11.96□□□□□ -0.5
VAT1-201ENST00000355653 ATMQ13315 3056 aa11.95□□□□□ -0.5
VAT1-201ENST00000355653 NUP37Q8NFH4 326 aa11.95□□□□□ -0.5
VAT1-201ENST00000355653 IGFBPL1Q8WX77 278 aa11.95□□□□□ -0.5
VAT1-201ENST00000355653 BSPH1Q075Z2 132 aa11.95□□□□□ -0.5
VAT1-201ENST00000355653 FOXC2Q99958 501 aa11.95□□□□□ -0.5
VAT1-201ENST00000355653 MAP1LC3AQ9H492 121 aa11.95□□□□□ -0.5
VAT1-201ENST00000355653 MRPS12O15235 138 aaKnown RBP11.94□□□□□ -0.5
VAT1-201ENST00000355653 ZNF80P51504 273 aaPredicted RBP11.94□□□□□ -0.5
VAT1-201ENST00000355653 ODF1Q14990 250 aa11.94□□□□□ -0.5
VAT1-201ENST00000355653 RPEQ96AT9 228 aa11.94□□□□□ -0.5
VAT1-201ENST00000355653 POLEQ07864 2286 aa11.94□□□□□ -0.5
VAT1-201ENST00000355653 ORM1P02763 201 aa11.94□□□□□ -0.5
VAT1-201ENST00000355653 VGLL1Q99990 258 aa11.94□□□□□ -0.5
VAT1-201ENST00000355653 TSSC4Q9Y5U2 329 aaPredicted RBP11.94□□□□□ -0.5
VAT1-201ENST00000355653 TRBV25-1A0A075B6N4 114 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 IGKCP01834 107 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 PPIFP30405 207 aaKnown RBP11.93□□□□□ -0.5
VAT1-201ENST00000355653 ZNF562Q6V9R5 426 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 ASCL5Q7RTU5 278 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 HHLA3Q9XRX5 114 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 ZGRF1Q86YA3 2104 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 BUB1B-PAK6H3BSN5 160 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 GATA1P15976 413 aaPredicted RBP11.93□□□□□ -0.5
VAT1-201ENST00000355653 ZC2HC1BQ5TFG8 222 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 PIP4P1Q86T03 277 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 MTURNQ8N3F0 131 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 CLUHP3Q96NS8 147 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 PRR25Q96S07 402 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 TMEM160Q9NX00 188 aa11.93□□□□□ -0.5
VAT1-201ENST00000355653 OTOGLQ3ZCN5 2332 aa11.92□□□□□ -0.5
VAT1-201ENST00000355653 IGHV3-23P01764 117 aa11.92□□□□□ -0.5
VAT1-201ENST00000355653 WFDC2Q14508 124 aa11.92□□□□□ -0.5
VAT1-201ENST00000355653 SIGMAR1Q99720 223 aa11.92□□□□□ -0.5
VAT1-201ENST00000355653 DYNLRB1Q9NP97 96 aa11.92□□□□□ -0.5
VAT1-201ENST00000355653 SH3BGRL2Q9UJC5 107 aa11.92□□□□□ -0.5
VAT1-201ENST00000355653 IGHV3OR16-8A0A075B7F1 116 aa11.91□□□□□ -0.5
VAT1-201ENST00000355653 TNFRSF13BO14836 293 aaPredicted RBP11.91□□□□□ -0.5
VAT1-201ENST00000355653 IGLV1-47P01700 117 aa11.91□□□□□ -0.5
VAT1-201ENST00000355653 HLA-DMBP28068 263 aa11.91□□□□□ -0.5
VAT1-201ENST00000355653 S100A7AQ86SG5 101 aa11.91□□□□□ -0.5
VAT1-201ENST00000355653 TMEM8BA6NDV4 472 aa11.91□□□□□ -0.5
VAT1-201ENST00000355653 TNFRSF6BO95407 300 aa11.91□□□□□ -0.5
VAT1-201ENST00000355653 CEND1Q8N111 149 aa11.91□□□□□ -0.5
VAT1-201ENST00000355653 TMEM158Q8WZ71 300 aa11.91□□□□□ -0.5
VAT1-201ENST00000355653 H3BMG7 143 aa11.9□□□□□ -0.5
VAT1-201ENST00000355653 FCER1GP30273 86 aa11.9□□□□□ -0.5
VAT1-201ENST00000355653 SH2D6Q7Z4S9 175 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms