RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 MEGF9Q9H1U4 602 aa9.87□□□□□ -0.83
COLCA1-201ENST00000355430 MRPL16Q9NX20 251 aaKnown RBP9.87□□□□□ -0.83
COLCA1-201ENST00000355430 SMKR1H3BMG3 65 aa9.87□□□□□ -0.83
COLCA1-201ENST00000355430 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.87□□□□□ -0.83
COLCA1-201ENST00000355430 DPM2O94777 84 aa9.87□□□□□ -0.83
COLCA1-201ENST00000355430 IFI27P40305 119 aaPredicted RBP9.87□□□□□ -0.83
COLCA1-201ENST00000355430 WT1-ASQ06250 92 aa9.87□□□□□ -0.83
COLCA1-201ENST00000355430 SPRNQ5BIV9 151 aa9.87□□□□□ -0.83
COLCA1-201ENST00000355430 TPSG1Q9NRR2 321 aa9.87□□□□□ -0.83
COLCA1-201ENST00000355430 LSM4Q9Y4Z0 139 aaKnown RBP9.87□□□□□ -0.83
COLCA1-201ENST00000355430 IGKCP01834 107 aa9.86□□□□□ -0.83
COLCA1-201ENST00000355430 NXT2Q9NPJ8 142 aaKnown RBP9.86□□□□□ -0.83
COLCA1-201ENST00000355430 DIAPH2-AS1Q14236 149 aa9.86□□□□□ -0.83
COLCA1-201ENST00000355430 TDRG1Q3Y452 100 aa9.86□□□□□ -0.83
COLCA1-201ENST00000355430 IL17RELQ6ZVW7 336 aa9.86□□□□□ -0.83
COLCA1-201ENST00000355430 FAM231DQ6ZW35 169 aa9.86□□□□□ -0.83
COLCA1-201ENST00000355430 AMN1Q8IY45 258 aa9.86□□□□□ -0.83
COLCA1-201ENST00000355430 ZNF492Q9P255 531 aa9.86□□□□□ -0.83
COLCA1-201ENST00000355430 SHISA9B4DS77 424 aa9.86□□□□□ -0.83
COLCA1-201ENST00000355430 IGLL1P15814 213 aa9.86□□□□□ -0.83
COLCA1-201ENST00000355430 RNASE4P34096 147 aaKnown RBP9.86□□□□□ -0.83
COLCA1-201ENST00000355430 OR2K2Q8NGT1 345 aa9.86□□□□□ -0.83
COLCA1-201ENST00000355430 ZNF295-AS1Q8N0V1 137 aa9.86□□□□□ -0.83
COLCA1-201ENST00000355430 SPTBN1Q01082 2364 aaKnown RBP9.86□□□□□ -0.83
COLCA1-201ENST00000355430 IGLV3-9A0A075B6K5 115 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 IGHV1-24A0A0C4DH33 117 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 PPBPP02775 128 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 NCOR1P1Q9H4R4 102 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 ADAMTS9Q9P2N4 1935 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 STPG4Q8N801 248 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 C1QTNF4Q9BXJ3 329 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 DOCK10Q96BY6 2186 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 ZNF843Q8N446 348 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 FXYD5Q96DB9 178 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 KIR2DL4Q99706 377 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 TMEM170BQ5T4T1 132 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 DTX2Q86UW9 622 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 ARHGAP21Q5T5U3 1957 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 YPEL4Q96NS1 127 aa9.85□□□□□ -0.83
COLCA1-201ENST00000355430 A0A1B0GWB2 263 aa9.84□□□□□ -0.83
COLCA1-201ENST00000355430 C8orf49Q96NF6 230 aa9.84□□□□□ -0.83
COLCA1-201ENST00000355430 PSMG4Q5JS54 123 aa9.84□□□□□ -0.83
COLCA1-201ENST00000355430 OR9G4Q8NGQ1 327 aa9.84□□□□□ -0.83
COLCA1-201ENST00000355430 GLMPQ8WWB7 406 aa9.84□□□□□ -0.83
COLCA1-201ENST00000355430 SHANK2-AS3Q9BTD1 123 aa9.84□□□□□ -0.83
COLCA1-201ENST00000355430 GAGE1Q13065 139 aa9.84□□□□□ -0.83
COLCA1-201ENST00000355430 SAMD5Q5TGI4 173 aa9.84□□□□□ -0.83
COLCA1-201ENST00000355430 SIGLEC15Q6ZMC9 328 aa9.84□□□□□ -0.83
COLCA1-201ENST00000355430 PTPRSQ13332 1948 aa9.83□□□□□ -0.84
COLCA1-201ENST00000355430 TMEM213A2RRL7 107 aa9.83□□□□□ -0.84
COLCA1-201ENST00000355430 OR5A1Q8NGJ0 315 aa9.83□□□□□ -0.84
COLCA1-201ENST00000355430 TMEM158Q8WZ71 300 aa9.83□□□□□ -0.84
COLCA1-201ENST00000355430 POLEQ07864 2286 aa9.83□□□□□ -0.84
COLCA1-201ENST00000355430 LINC01619G3V211 115 aa9.83□□□□□ -0.84
COLCA1-201ENST00000355430 SRSF1Q07955 248 aaKnown RBP eCLIP9.83□□□□□ -0.84
COLCA1-201ENST00000355430 CT83Q5H943 113 aa9.83□□□□□ -0.84
COLCA1-201ENST00000355430 TMEM101Q96IK0 257 aa9.83□□□□□ -0.84
COLCA1-201ENST00000355430 TNFRSF18Q9Y5U5 241 aa9.83□□□□□ -0.84
COLCA1-201ENST00000355430 HOXA3O43365 443 aaPredicted RBP9.82□□□□□ -0.84
COLCA1-201ENST00000355430 CD5LO43866 347 aa9.82□□□□□ -0.84
COLCA1-201ENST00000355430 APOMO95445 188 aa9.82□□□□□ -0.84
COLCA1-201ENST00000355430 POU2AF1Q16633 256 aa9.82□□□□□ -0.84
COLCA1-201ENST00000355430 SFTA2Q6UW10 78 aa9.82□□□□□ -0.84
COLCA1-201ENST00000355430 LYPD1Q8N2G4 141 aa9.82□□□□□ -0.84
COLCA1-201ENST00000355430 USF3Q68DE3 2245 aa9.82□□□□□ -0.84
COLCA1-201ENST00000355430 TEX36Q5VZQ5 186 aa9.82□□□□□ -0.84
COLCA1-201ENST00000355430 OVOL1O14753 267 aa9.82□□□□□ -0.84
COLCA1-201ENST00000355430 KIR3DS1Q14943 382 aa9.82□□□□□ -0.84
COLCA1-201ENST00000355430 BCL6BQ8N143 479 aaPredicted RBP9.82□□□□□ -0.84
COLCA1-201ENST00000355430 TMEM75Q8N9X5 138 aa9.82□□□□□ -0.84
COLCA1-201ENST00000355430 Q6ZVH6 145 aa9.82□□□□□ -0.84
COLCA1-201ENST00000355430 PRSS2P07478 247 aa9.81□□□□□ -0.84
COLCA1-201ENST00000355430 FRMD6-AS1P0C7T7 363 aa9.81□□□□□ -0.84
COLCA1-201ENST00000355430 THAP8Q8NA92 274 aa9.81□□□□□ -0.84
COLCA1-201ENST00000355430 CHTOPQ9Y3Y2 248 aaKnown RBP9.81□□□□□ -0.84
COLCA1-201ENST00000355430 TRGV11A0A075B6L2 103 aa9.81□□□□□ -0.84
COLCA1-201ENST00000355430 MORN5Q5VZ52 161 aa9.81□□□□□ -0.84
COLCA1-201ENST00000355430 C1orf122Q6ZSJ8 110 aa9.81□□□□□ -0.84
COLCA1-201ENST00000355430 SRSF8Q9BRL6 282 aaKnown RBP9.81□□□□□ -0.84
COLCA1-201ENST00000355430 LAGE3Q14657 143 aa9.81□□□□□ -0.84
COLCA1-201ENST00000355430 Q8NA96 180 aa9.81□□□□□ -0.84
COLCA1-201ENST00000355430 TMEM190Q8WZ59 177 aa9.81□□□□□ -0.84
COLCA1-201ENST00000355430 ROS1P08922 2347 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 IGHV4-30-2A0A087WSY4 118 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 GAGE12BA1L429 117 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 FAM231BA6NCW3 169 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 LOXP28300 417 aaPredicted RBP9.8□□□□□ -0.84
COLCA1-201ENST00000355430 ERCC8Q13216 396 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 FAM208BQ5VWN6 2430 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 TRBV19A0A075B6N1 114 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 TRGV4A0A0C4DH28 118 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 FBXL19-AS1Q494R0 122 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 FREM1Q5H8C1 2179 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 IGHV4-39P01824 125 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 RPL35AP18077 110 aaKnown RBP9.8□□□□□ -0.84
COLCA1-201ENST00000355430 C10orf105Q8TEF2 133 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 NDUFS7O75251 213 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 VPREB3Q9UKI3 123 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 PTPRQQ9UMZ3 2332 aa9.8□□□□□ -0.84
COLCA1-201ENST00000355430 PAPPA-AS1Q5QFB9 102 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms