RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 SRSF8Q9BRL6 282 aaKnown RBP4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 IGLV3-12A0A075B6K2 115 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 TRAV3A0A0B4J244 114 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 I3L3M4 83 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 ANGP03950 147 aaKnown RBP4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 NBL1P41271 181 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 IGF2BP2-AS1Q96M15 143 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 CLPSL2Q6UWE3 100 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 DEFB105AQ8NG35 78 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 FGFBP3Q8TAT2 258 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 TRBV20-1A0A075B6N2 111 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 TRBV24-1A0A075B6N3 115 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 H0YIZ8 118 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 LINC00114Q6XXX2 140 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 MBD3L4A6NDZ8 208 aaPredicted RBP4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 MBD3L3A6NE82 208 aaPredicted RBP4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 MBD3L5A6NJ08 208 aaPredicted RBP4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 TMEM256Q8N2U0 113 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 MBD3L2Q8NHZ7 208 aaPredicted RBP4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 IGLV3-32A0A0A0MS00 114 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 TMEM141Q96I45 108 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 ARMS2P0C7Q2 107 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 DSCAML1Q8TD84 2053 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 A0A0G2JNJ9 132 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 Q9UFV3 132 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 MPV17L2Q567V2 206 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 LRP5O75197 1615 aa4.7□□□□□ -1.66
SRGAP1-201ENST00000355086 LOC105371267A0A1B0GV96 52 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 PDE6HQ13956 83 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 KLK9Q9UKQ9 250 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 IGHV3-38A0A0C4DH36 116 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 MSMBP08118 114 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 ZFP36L1Q07352 338 aaKnown RBP4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 CXCL1P09341 107 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 CFHR2P36980 270 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 RBM3P98179 157 aaKnown RBP4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 STPG4Q8N801 248 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 PAQR4Q8N4S7 273 aaPredicted RBP4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 TRPM3Q9HCF6 1732 aaPredicted RBP4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 GAFA1Q96PS6 74 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 PAX9P55771 341 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 PRR14LQ5THK1 2151 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 C3orf79P0CE67 100 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 GAS1P54826 345 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 GGNQ86UU5 652 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 MRPL27Q9P0M9 148 aaKnown RBP4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 TINCRA0A1B0GVN0 87 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 FGF6P10767 208 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 RUSC1-AS1Q66K80 236 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 HLA-DRB4P13762 266 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 HLA-DRB4X5D2U9 266 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 MED12LQ86YW9 2145 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 SP5Q6BEB4 398 aaPredicted RBP4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 UTF1Q5T230 341 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 MAPK1IP1LQ8NDC0 245 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 ADAMTSL1Q8N6G6 1762 aa4.69□□□□□ -1.66
SRGAP1-201ENST00000355086 IFITM1P13164 125 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 TMEM75Q8N9X5 138 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 LY6G6FQ5SQ64 297 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 MPZP25189 248 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 ZNRF2Q8NHG8 242 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 A0A096LPF7 62 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 PTPN13Q12923 2485 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 IGKV1-12A0A0C4DH73 117 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 IGKV1D-12P01611 117 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 NTF4P34130 210 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 MST1LQ2TV78 715 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 IGKV1D-8A0A087WSZ0 117 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 LY6HO94772 140 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 UNQ6494/PRO21346Q6UXR6 183 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 MARF1Q9Y4F3 1742 aaKnown RBP4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 PRB1P04280 392 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 CRYGSP22914 178 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 LY96Q9Y6Y9 160 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 GLI3P10071 1580 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 PARP14Q460N5 1801 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 MAJINQ3KP22 176 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 IGKV2D-24A0A075B6R9 120 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 FNDC10F2Z333 226 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 LAIR2Q6ISS4 152 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 EFNA2O43921 213 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 PKIGQ9Y2B9 76 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 IGKV1OR2-108A0A075B7D4 117 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 CDKN1BP46527 198 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 Q71RC1 249 aaPredicted RBP4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 IGHV1OR15-1A0A075B7D0 117 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 COL8A2P25067 703 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 NMSQ5H8A3 153 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 TRAV12-2A0A075B6T6 113 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 SPANXDQ9BXN6 97 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 A0A1B0GW64 132 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 CD177Q8N6Q3 437 aa4.68□□□□□ -1.66
SRGAP1-201ENST00000355086 DLEU1O43261 78 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 BTCP35070 178 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 Q9HAA7 133 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 RPL18AQ02543 176 aaKnown RBP4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 C8orf49Q96NF6 230 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 NDUFA12Q9UI09 145 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 OTOGLQ3ZCN5 2332 aa4.67□□□□□ -1.66
SRGAP1-201ENST00000355086 PSME4Q14997 1843 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms