RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 IGKV1D-12P01611 117 aa8.11□□□□□ -1.11
COL11A1-201ENST00000353414 TNFSF13O75888 250 aa8.11□□□□□ -1.11
COL11A1-201ENST00000353414 CMC4P56277 68 aaPredicted RBP8.11□□□□□ -1.11
COL11A1-201ENST00000353414 KLF5Q13887 457 aaPredicted RBP8.11□□□□□ -1.11
COL11A1-201ENST00000353414 TCTEX1D4Q5JR98 221 aa8.11□□□□□ -1.11
COL11A1-201ENST00000353414 DUX4L9Q6RFH8 374 aaPredicted RBP8.11□□□□□ -1.11
COL11A1-201ENST00000353414 PRSS57Q6UWY2 283 aa8.11□□□□□ -1.11
COL11A1-201ENST00000353414 C1QTNF4Q9BXJ3 329 aa8.11□□□□□ -1.11
COL11A1-201ENST00000353414 ADAMTS9Q9P2N4 1935 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 USF3Q68DE3 2245 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 IGKV1-16P04430 117 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 XCL1P47992 114 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 FAM90A2PQ658T7 463 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 TREML4Q6UXN2 200 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 TMEM242Q9NWH2 141 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 TINCRA0A1B0GVN0 87 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 VCYO14598 125 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 NUP35Q8NFH5 326 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 TRBV25-1A0A075B6N4 114 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 IGLV3-19P01714 112 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 ATP5IP56385 69 aaPredicted RBP8.1□□□□□ -1.11
COL11A1-201ENST00000353414 SEC11AP67812 179 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 HSD52Q0P140 79 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 SIGLEC9Q9Y336 463 aa8.1□□□□□ -1.11
COL11A1-201ENST00000353414 APOC4P55056 127 aa8.09□□□□□ -1.11
COL11A1-201ENST00000353414 MORN5Q5VZ52 161 aa8.09□□□□□ -1.11
COL11A1-201ENST00000353414 RPP25LQ8N5L8 163 aaKnown RBP8.09□□□□□ -1.11
COL11A1-201ENST00000353414 NOP10Q9NPE3 64 aaKnown RBP8.09□□□□□ -1.11
COL11A1-201ENST00000353414 LINC00473A8K010 186 aa8.09□□□□□ -1.11
COL11A1-201ENST00000353414 HAMPP81172 84 aa8.09□□□□□ -1.11
COL11A1-201ENST00000353414 TMEM170AQ8WVE7 144 aa8.09□□□□□ -1.11
COL11A1-201ENST00000353414 EP300Q09472 2414 aaPredicted RBP8.09□□□□□ -1.11
COL11A1-201ENST00000353414 PCNX2A6NKB5 2137 aa8.09□□□□□ -1.11
COL11A1-201ENST00000353414 TSKUQ8WUA8 353 aa8.09□□□□□ -1.11
COL11A1-201ENST00000353414 ARHGAP21Q5T5U3 1957 aa8.09□□□□□ -1.11
COL11A1-201ENST00000353414 A0A0G2JMZ2 1700 aa8.09□□□□□ -1.11
COL11A1-201ENST00000353414 LRRC37A2A6NM11 1700 aa8.09□□□□□ -1.11
COL11A1-201ENST00000353414 FAM223BA6NKX1 122 aa8.09□□□□□ -1.12
COL11A1-201ENST00000353414 DEFB4AO15263 64 aa8.09□□□□□ -1.12
COL11A1-201ENST00000353414 CD5P06127 495 aa8.09□□□□□ -1.12
COL11A1-201ENST00000353414 KIR3DS1Q14943 382 aa8.09□□□□□ -1.12
COL11A1-201ENST00000353414 FAM223AQ8IWN6 122 aa8.09□□□□□ -1.12
COL11A1-201ENST00000353414 A0A1B0GWJ7 208 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 ARMS2P0C7Q2 107 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 TEX36Q5VZQ5 186 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 SVIPQ8NHG7 77 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 LIME1Q9H400 295 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 IGLV10-54A0A075B6I4 117 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 TMEM213A2RRL7 107 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 IGHV3-30P01768 117 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 IGHV3-33P01772 117 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 IGHV3-30-3P0DP02 117 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 IGHV3-30-5P0DP03 117 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 NTF4P34130 210 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 MST1LQ2TV78 715 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 STPG4Q8N801 248 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 MINOS1Q5TGZ0 78 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 APRG1Q8IVJ8 170 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 DAZ1Q9NQZ3 744 aaKnown RBP8.08□□□□□ -1.12
COL11A1-201ENST00000353414 MINOS1-NBL1R4GNA1 71 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 MMP23AO75900 390 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 NLRC5Q86WI3 1866 aa8.08□□□□□ -1.12
COL11A1-201ENST00000353414 NDUFS6O75380 124 aaKnown RBP8.07□□□□□ -1.12
COL11A1-201ENST00000353414 GLRX5Q86SX6 157 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 TP53TG1Q9Y2A0 90 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 KIF26AQ9ULI4 1882 aaPredicted RBP8.07□□□□□ -1.12
COL11A1-201ENST00000353414 IGKV1D-17A0A075B6S4 117 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 IGFBP3P17936 291 aaPredicted RBP8.07□□□□□ -1.12
COL11A1-201ENST00000353414 CD200R1LQ6Q8B3 271 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 USMG5Q96IX5 58 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 NDUFAF3Q9BU61 184 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 NEUROG3Q9Y4Z2 214 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 RNF222A6NCQ9 220 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 CXCL1P09341 107 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 LRCOL1A6NCL2 159 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 ARTNQ5T4W7 220 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 LAIR2Q6ISS4 152 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 MYMXA0A1B0GTQ4 84 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 NTN3O00634 580 aaPredicted RBP8.07□□□□□ -1.12
COL11A1-201ENST00000353414 TRACP01848 142 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 IGHG3P01860 377 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 EML6Q6ZMW3 1958 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 HIST1H2BKO60814 126 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 HIST1H2BJP06899 126 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 HIST1H2BOP23527 126 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 HIST1H2BBP33778 126 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 HIST1H2BDP58876 126 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 HIST1H2BCP62807 126 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 RLFQ13129 1914 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 HIST2H2BEQ16778 126 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.07□□□□□ -1.12
COL11A1-201ENST00000353414 HIST1H2BHQ93079 126 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 PLEKHB2Q96CS7 222 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 HIST1H2BNQ99877 126 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 HIST1H2BMQ99879 126 aa8.07□□□□□ -1.12
COL11A1-201ENST00000353414 SUPT4H1P63272 117 aaKnown RBP8.06□□□□□ -1.12
COL11A1-201ENST00000353414 HEPN1Q6WQI6 88 aa8.06□□□□□ -1.12
COL11A1-201ENST00000353414 WFDC11Q8NEX6 87 aa8.06□□□□□ -1.12
COL11A1-201ENST00000353414 M0R1W7 72 aa8.06□□□□□ -1.12
COL11A1-201ENST00000353414 GNB1LQ9BYB4 327 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms