RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 OR9G4Q8NGQ1 327 aa9.72□□□□□ -0.85
SMAD9-201ENST00000350148 RNF223E7ERA6 249 aa9.72□□□□□ -0.85
SMAD9-201ENST00000350148 C20orf144Q9BQM9 153 aa9.72□□□□□ -0.85
SMAD9-201ENST00000350148 WT1-ASQ06250 92 aa9.72□□□□□ -0.85
SMAD9-201ENST00000350148 FAM53AQ6NSI3 398 aaPredicted RBP9.72□□□□□ -0.85
SMAD9-201ENST00000350148 TSKUQ8WUA8 353 aa9.72□□□□□ -0.85
SMAD9-201ENST00000350148 PCNX3Q9H6A9 2034 aa9.72□□□□□ -0.85
SMAD9-201ENST00000350148 NCOA6Q14686 2063 aaPredicted RBP9.72□□□□□ -0.85
SMAD9-201ENST00000350148 TRAV21A0A0B4J279 112 aa9.72□□□□□ -0.85
SMAD9-201ENST00000350148 TRACP01848 142 aa9.72□□□□□ -0.85
SMAD9-201ENST00000350148 HAPLN4Q86UW8 402 aa9.72□□□□□ -0.85
SMAD9-201ENST00000350148 WFDC12Q8WWY7 111 aa9.72□□□□□ -0.85
SMAD9-201ENST00000350148 LYPD6BQ8NI32 183 aa9.71□□□□□ -0.85
SMAD9-201ENST00000350148 SCRT1Q9BWW7 348 aa9.71□□□□□ -0.85
SMAD9-201ENST00000350148 GNB1LQ9BYB4 327 aa9.71□□□□□ -0.85
SMAD9-201ENST00000350148 DOCK7Q96N67 2140 aa9.71□□□□□ -0.85
SMAD9-201ENST00000350148 CGB1A6NKQ9 187 aa9.71□□□□□ -0.85
SMAD9-201ENST00000350148 SRRM4A7MD48 611 aaKnown RBP9.71□□□□□ -0.85
SMAD9-201ENST00000350148 HERV-K104P63124 156 aa9.71□□□□□ -0.85
SMAD9-201ENST00000350148 LINC01551Q86U37 167 aa9.71□□□□□ -0.85
SMAD9-201ENST00000350148 HAX1O00165 279 aa9.71□□□□□ -0.86
SMAD9-201ENST00000350148 ATP6V0E1O15342 81 aa9.71□□□□□ -0.86
SMAD9-201ENST00000350148 FCN3O75636 299 aa9.71□□□□□ -0.86
SMAD9-201ENST00000350148 ZGRF1Q86YA3 2104 aa9.71□□□□□ -0.86
SMAD9-201ENST00000350148 FOXC2Q99958 501 aa9.71□□□□□ -0.86
SMAD9-201ENST00000350148 NDUFC2O95298 119 aa9.71□□□□□ -0.86
SMAD9-201ENST00000350148 KIR3DS1Q14943 382 aa9.71□□□□□ -0.86
SMAD9-201ENST00000350148 F2Z2F3 143 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 TMEM101Q96IK0 257 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 IGLV1-47P01700 117 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 APOHP02749 345 aaPredicted RBP9.7□□□□□ -0.86
SMAD9-201ENST00000350148 CNTFRP26992 372 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 CRYBA4P53673 196 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 GNG5P63218 68 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 DEFB113Q30KQ7 82 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 OR10J3Q5JRS4 329 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 DLX4Q92988 240 aaPredicted RBP9.7□□□□□ -0.86
SMAD9-201ENST00000350148 LINC00477Q96M19 166 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 H7C1H1 209 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 PMS2P5A8MQ11 134 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 PRR20EP86478 221 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 PRR20CP86479 221 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 PRR20DP86480 221 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 PRR20BP86481 221 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 PRR20AP86496 221 aa9.7□□□□□ -0.86
SMAD9-201ENST00000350148 INTS1Q8N201 2190 aaKnown RBP9.7□□□□□ -0.86
SMAD9-201ENST00000350148 IGHV3OR16-13A0A075B7E8 117 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 IGHV3-74A0A0B4J1X5 117 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 FAM90A2PQ658T7 463 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 RUSC1-AS1Q66K80 236 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 Q96MF0 132 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 POLR3KQ9Y2Y1 108 aaPredicted RBP9.69□□□□□ -0.86
SMAD9-201ENST00000350148 A0A087X0K7 114 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 C18orf15Q96N68 181 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 IGHV3-66A0A0C4DH42 116 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 NPIPB6E9PJ23 425 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 ZNF329Q86UD4 541 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 SPANXDQ9BXN6 97 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 TRAV26-1A0A087WT03 109 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 IGHV3-49A0A0A0MS15 119 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 IGLC7A0M8Q6 106 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 FAM231BA6NCW3 169 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 IGLV2-14P01704 120 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 KIAA2026Q5HYC2 2103 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 PPBPP02775 128 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 IGFBPL1Q8WX77 278 aa9.69□□□□□ -0.86
SMAD9-201ENST00000350148 KLF17Q5JT82 389 aaPredicted RBP9.68□□□□□ -0.86
SMAD9-201ENST00000350148 LY6G5BQ8NDX9 201 aa9.68□□□□□ -0.86
SMAD9-201ENST00000350148 RNASE8Q8TDE3 154 aaKnown RBP9.68□□□□□ -0.86
SMAD9-201ENST00000350148 DIDO1Q9BTC0 2240 aaKnown RBP9.68□□□□□ -0.86
SMAD9-201ENST00000350148 HIGD1CA8MV81 97 aa9.68□□□□□ -0.86
SMAD9-201ENST00000350148 Q6ZVH6 145 aa9.68□□□□□ -0.86
SMAD9-201ENST00000350148 ZNF492Q9P255 531 aa9.68□□□□□ -0.86
SMAD9-201ENST00000350148 NDUFA4O00483 81 aa9.68□□□□□ -0.86
SMAD9-201ENST00000350148 EVI2AP22794 236 aa9.68□□□□□ -0.86
SMAD9-201ENST00000350148 LRRC75A-AS1Q8N1F1 130 aa9.68□□□□□ -0.86
SMAD9-201ENST00000350148 DAZ1Q9NQZ3 744 aaKnown RBP9.68□□□□□ -0.86
SMAD9-201ENST00000350148 LSM4Q9Y4Z0 139 aaKnown RBP9.68□□□□□ -0.86
SMAD9-201ENST00000350148 TNRC6BQ9UPQ9 1833 aaKnown RBP9.68□□□□□ -0.86
SMAD9-201ENST00000350148 DIAPH2-AS1Q14236 149 aa9.68□□□□□ -0.86
SMAD9-201ENST00000350148 ODF3L1Q8IXM7 274 aa9.68□□□□□ -0.86
SMAD9-201ENST00000350148 NXT2Q9NPJ8 142 aaKnown RBP9.68□□□□□ -0.86
SMAD9-201ENST00000350148 COL6A6A6NMZ7 2263 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 ELANEP08246 267 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 HIST1H4AP62805 103 aaKnown RBP9.67□□□□□ -0.86
SMAD9-201ENST00000350148 TMEM75Q8N9X5 138 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 CEP350Q5VT06 3117 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 H3BRN7 92 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 RRN3P1Q2M238 152 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 MORN3Q6PF18 240 aaPredicted RBP9.67□□□□□ -0.86
SMAD9-201ENST00000350148 BCL6BQ8N143 479 aaPredicted RBP9.67□□□□□ -0.86
SMAD9-201ENST00000350148 EXPH5Q8NEV8 1989 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 CENPVL3A0A0U1RRI6 287 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 ZNF138P52744 262 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 ZNF56Q15929 161 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 MLANAQ16655 118 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 C11orf52Q96A22 123 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 GFRA4Q9GZZ7 299 aa9.67□□□□□ -0.86
SMAD9-201ENST00000350148 P0C879 139 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms