RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 UCNP55089 124 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 CARD19Q96LW7 228 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 SCN5AQ14524 2016 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 WNT2P09544 360 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 RASL10AQ92737 203 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 ZNF524Q96C55 264 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 DOCK3Q8IZD9 2030 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 DENND4AQ7Z401 1863 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 TRGV11A0A075B6L2 103 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 IGHV3-73A0A0B4J1V6 119 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 SRRM4A7MD48 611 aaKnown RBP9.76□□□□□ -0.85
COL12A1-202ENST00000345356 PDE6HQ13956 83 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 C15orf32Q32M92 178 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 TRAV26-2A0A0B4J265 109 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 PAX8Q06710 450 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 ANKRD29Q8N6D5 301 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 LAMTOR3Q9UHA4 124 aa9.76□□□□□ -0.85
COL12A1-202ENST00000345356 A0A087WWL8 130 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 IGHV1-3A0A0C4DH29 117 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 A0A1W2PPI3 338 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 CFHR1Q03591 330 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 LY6G5BQ8NDX9 201 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 EFNA4P52798 201 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 RBX1P62877 108 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 UTF1Q5T230 341 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 TRBV25-1A0A075B6N4 114 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 IGLV3-19P01714 112 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 C3orf36Q3SXR2 165 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 LINC01545Q5VT33 79 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 IL17RELQ6ZVW7 336 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 ADARB2-AS1A8MUL3 147 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 SIGLEC9Q9Y336 463 aa9.75□□□□□ -0.85
COL12A1-202ENST00000345356 TRBV19A0A075B6N1 114 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 PHLDA1Q8WV24 401 aaPredicted RBP9.74□□□□□ -0.85
COL12A1-202ENST00000345356 IGHV1-8P0DP01 117 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 LINC01560Q8TB33 94 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 TMEM126AQ9H061 195 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 HEATR5AQ86XA9 2040 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 APC2O95996 2303 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 RNF166Q96A37 237 aaPredicted RBP9.74□□□□□ -0.85
COL12A1-202ENST00000345356 TRGV2A0A075B6R0 118 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 DNAJC30Q96LL9 226 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 SPTA1P02549 2419 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 PRR20EP86478 221 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 PRR20CP86479 221 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 PRR20DP86480 221 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 PRR20BP86481 221 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 PRR20AP86496 221 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 PRIMA1Q86XR5 153 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 FXYD5Q96DB9 178 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 SPRR3Q9UBC9 169 aa9.74□□□□□ -0.85
COL12A1-202ENST00000345356 XIRP1Q702N8 1843 aaKnown RBP9.73□□□□□ -0.85
COL12A1-202ENST00000345356 MRAPQ8TCY5 172 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 A0A087WX48 190 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 EPOPA6NHQ4 379 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 K7EMI3 77 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 DUSP14O95147 198 aaKnown RBP9.73□□□□□ -0.85
COL12A1-202ENST00000345356 FXYD2P54710 66 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 NDPQ00604 133 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 LINC00477Q96M19 166 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 NDUFA4L2Q9NRX3 87 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 SOCS3O14543 225 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 C9orf139Q6ZV77 190 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 TMEM141Q96I45 108 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 ZNRD1Q9P1U0 126 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 DIDO1Q9BTC0 2240 aaKnown RBP9.73□□□□□ -0.85
COL12A1-202ENST00000345356 VWC2LB2RUY7 222 aa9.73□□□□□ -0.85
COL12A1-202ENST00000345356 MALP21145 153 aa9.72□□□□□ -0.85
COL12A1-202ENST00000345356 KLRD1Q13241 179 aa9.72□□□□□ -0.85
COL12A1-202ENST00000345356 FAM120AOSQ5T036 256 aa9.72□□□□□ -0.85
COL12A1-202ENST00000345356 COLCA1Q6ZS62 124 aa9.72□□□□□ -0.85
COL12A1-202ENST00000345356 GAFA1Q96PS6 74 aa9.72□□□□□ -0.85
COL12A1-202ENST00000345356 TRAV13-1A0A0B4J241 112 aa9.72□□□□□ -0.85
COL12A1-202ENST00000345356 LYNX1G3V0Z9 82 aa9.72□□□□□ -0.85
COL12A1-202ENST00000345356 LTAP01374 205 aa9.72□□□□□ -0.85
COL12A1-202ENST00000345356 LYNX1P0DP58 116 aa9.72□□□□□ -0.85
COL12A1-202ENST00000345356 DTX2Q86UW9 622 aa9.72□□□□□ -0.85
COL12A1-202ENST00000345356 TET1Q8NFU7 2136 aa9.72□□□□□ -0.85
COL12A1-202ENST00000345356 SPANXCQ9NY87 97 aa9.71□□□□□ -0.85
COL12A1-202ENST00000345356 FOXI1Q12951 378 aa9.71□□□□□ -0.85
COL12A1-202ENST00000345356 IGHG4P01861 327 aa9.71□□□□□ -0.86
COL12A1-202ENST00000345356 ZFP36L1Q07352 338 aaKnown RBP9.71□□□□□ -0.86
COL12A1-202ENST00000345356 RSPO1Q2MKA7 263 aaPredicted RBP9.71□□□□□ -0.86
COL12A1-202ENST00000345356 PRR25Q96S07 402 aa9.71□□□□□ -0.86
COL12A1-202ENST00000345356 JPT2Q9H910 190 aa9.71□□□□□ -0.86
COL12A1-202ENST00000345356 FRMD6-AS1P0C7T7 363 aa9.71□□□□□ -0.86
COL12A1-202ENST00000345356 B3GALT5-AS1P59052 145 aa9.71□□□□□ -0.86
COL12A1-202ENST00000345356 TEN1Q86WV5 123 aa9.71□□□□□ -0.86
COL12A1-202ENST00000345356 SSC4DQ8WTU2 575 aa9.71□□□□□ -0.86
COL12A1-202ENST00000345356 CFC1BP0CG36 223 aa9.7□□□□□ -0.86
COL12A1-202ENST00000345356 CFC1P0CG37 223 aa9.7□□□□□ -0.86
COL12A1-202ENST00000345356 LMO1P25800 156 aa9.7□□□□□ -0.86
COL12A1-202ENST00000345356 CRIPAKQ8N1N5 446 aa9.7□□□□□ -0.86
COL12A1-202ENST00000345356 PRDM6Q9NQX0 595 aa9.7□□□□□ -0.86
COL12A1-202ENST00000345356 RNF5Q99942 180 aa9.7□□□□□ -0.86
COL12A1-202ENST00000345356 SMIM2Q9BVW6 85 aa9.7□□□□□ -0.86
COL12A1-202ENST00000345356 LINC00527Q9UJ94 153 aa9.7□□□□□ -0.86
COL12A1-202ENST00000345356 RS1O15537 224 aa9.7□□□□□ -0.86
COL12A1-202ENST00000345356 C1orf43Q9BWL3 253 aa9.7□□□□□ -0.86
COL12A1-202ENST00000345356 J3QQQ9 107 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms