RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 PKHD1P08F94 4074 aa8.8□□□□□ -1
SGCA-202ENST00000344627 LYRM9A8MSI8 78 aa8.79□□□□□ -1
SGCA-202ENST00000344627 J3KRW8 73 aa8.79□□□□□ -1
SGCA-202ENST00000344627 MRPS12O15235 138 aaKnown RBP8.79□□□□□ -1
SGCA-202ENST00000344627 RTL8CO15255 209 aa8.79□□□□□ -1
SGCA-202ENST00000344627 HBG1P69891 147 aa8.79□□□□□ -1
SGCA-202ENST00000344627 HBG2P69892 147 aa8.79□□□□□ -1
SGCA-202ENST00000344627 Q6ZR54 194 aa8.79□□□□□ -1
SGCA-202ENST00000344627 TMEM256Q8N2U0 113 aa8.79□□□□□ -1
SGCA-202ENST00000344627 MARVELD1Q9BSK0 173 aa8.79□□□□□ -1
SGCA-202ENST00000344627 PXMP4Q9Y6I8 212 aa8.79□□□□□ -1
SGCA-202ENST00000344627 IGSF23A1L1A6 192 aa8.78□□□□□ -1
SGCA-202ENST00000344627 PRAC2D3DTV9 90 aa8.78□□□□□ -1
SGCA-202ENST00000344627 F5H768 121 aa8.78□□□□□ -1
SGCA-202ENST00000344627 INMT-MINDY4F8WBC2 141 aa8.78□□□□□ -1
SGCA-202ENST00000344627 SLC17A3O00476 420 aa8.78□□□□□ -1
SGCA-202ENST00000344627 FGF7P21781 194 aa8.78□□□□□ -1
SGCA-202ENST00000344627 TSPOP30536 169 aa8.78□□□□□ -1
SGCA-202ENST00000344627 CDKN1BP46527 198 aa8.78□□□□□ -1
SGCA-202ENST00000344627 SULT1A1P50225 295 aa8.78□□□□□ -1
SGCA-202ENST00000344627 TAS2R60P59551 318 aa8.78□□□□□ -1
SGCA-202ENST00000344627 TMEM252Q8N6L7 170 aa8.78□□□□□ -1
SGCA-202ENST00000344627 PFDN5Q99471 154 aa8.78□□□□□ -1
SGCA-202ENST00000344627 ATG101Q9BSB4 218 aa8.78□□□□□ -1
SGCA-202ENST00000344627 PARD6GQ9BYG4 376 aaPredicted RBP8.78□□□□□ -1
SGCA-202ENST00000344627 LYRM2Q9NU23 88 aaPredicted RBP8.78□□□□□ -1
SGCA-202ENST00000344627 SLC39A9Q9NUM3 307 aa8.78□□□□□ -1
SGCA-202ENST00000344627 WDR83OSQ9Y284 106 aa8.78□□□□□ -1
SGCA-202ENST00000344627 DNAH11Q96DT5 4516 aa8.77□□□□□ -1.01
SGCA-202ENST00000344627 H3BQ15 152 aa8.77□□□□□ -1.01
SGCA-202ENST00000344627 RLN2P04090 185 aa8.77□□□□□ -1.01
SGCA-202ENST00000344627 GUK1Q16774 197 aa8.77□□□□□ -1.01
SGCA-202ENST00000344627 C1orf134Q5TEV5 83 aa8.77□□□□□ -1.01
SGCA-202ENST00000344627 CCDC28AQ8IWP9 274 aa8.77□□□□□ -1.01
SGCA-202ENST00000344627 C16orf74Q96GX8 76 aa8.77□□□□□ -1.01
SGCA-202ENST00000344627 C11orf1Q9H5F2 150 aa8.77□□□□□ -1.01
SGCA-202ENST00000344627 TIMM8BQ9Y5J9 83 aaPredicted RBP8.77□□□□□ -1.01
SGCA-202ENST00000344627 SIX6O95475 246 aa8.76□□□□□ -1.01
SGCA-202ENST00000344627 NUDT3O95989 172 aa8.76□□□□□ -1.01
SGCA-202ENST00000344627 IGLC2P0DOY2 106 aa8.76□□□□□ -1.01
SGCA-202ENST00000344627 RPL29P47914 159 aaKnown RBP8.76□□□□□ -1.01
SGCA-202ENST00000344627 ATP6V1FQ16864 119 aa8.76□□□□□ -1.01
SGCA-202ENST00000344627 LRRC37A5PQ49AS3 106 aa8.76□□□□□ -1.01
SGCA-202ENST00000344627 SAT2Q96F10 170 aaPredicted RBP8.76□□□□□ -1.01
SGCA-202ENST00000344627 NOP10Q9NPE3 64 aaKnown RBP8.76□□□□□ -1.01
SGCA-202ENST00000344627 TIMM9Q9Y5J7 89 aa8.76□□□□□ -1.01
SGCA-202ENST00000344627 KIAA1109Q2LD37 5005 aa8.76□□□□□ -1.01
SGCA-202ENST00000344627 NACAE9PAV3 2078 aa8.76□□□□□ -1.01
SGCA-202ENST00000344627 H7BYZ3 331 aa8.75□□□□□ -1.01
SGCA-202ENST00000344627 ATP5G1P05496 136 aa8.75□□□□□ -1.01
SGCA-202ENST00000344627 LEPP41159 167 aa8.75□□□□□ -1.01
SGCA-202ENST00000344627 ATP5G3P48201 142 aa8.75□□□□□ -1.01
SGCA-202ENST00000344627 KIR3DS1Q14943 382 aa8.75□□□□□ -1.01
SGCA-202ENST00000344627 VWC2Q2TAL6 325 aa8.75□□□□□ -1.01
SGCA-202ENST00000344627 BLNKQ8WV28 456 aa8.75□□□□□ -1.01
SGCA-202ENST00000344627 SLC25A31Q9H0C2 315 aa8.75□□□□□ -1.01
SGCA-202ENST00000344627 ZNF586Q9NXT0 402 aa8.75□□□□□ -1.01
SGCA-202ENST00000344627 DYNC1H1Q14204 4646 aaKnown RBP8.75□□□□□ -1.01
SGCA-202ENST00000344627 TRAV12-3A0A0B4J271 114 aa8.74□□□□□ -1.01
SGCA-202ENST00000344627 PLAC8L1A1L4L8 177 aa8.74□□□□□ -1.01
SGCA-202ENST00000344627 CBY3A6NI87 242 aa8.74□□□□□ -1.01
SGCA-202ENST00000344627 MPDU1O75352 247 aa8.74□□□□□ -1.01
SGCA-202ENST00000344627 CT45A10P0DMU9 189 aa8.74□□□□□ -1.01
SGCA-202ENST00000344627 NHLH2Q02577 135 aa8.74□□□□□ -1.01
SGCA-202ENST00000344627 IL15RAQ13261 267 aa8.74□□□□□ -1.01
SGCA-202ENST00000344627 GFI1BQ5VTD9 330 aa8.74□□□□□ -1.01
SGCA-202ENST00000344627 ZNF493Q6ZR52 646 aa8.74□□□□□ -1.01
SGCA-202ENST00000344627 THAP6Q8TBB0 222 aa8.74□□□□□ -1.01
SGCA-202ENST00000344627 TMEM263Q8WUH6 116 aaKnown RBP8.74□□□□□ -1.01
SGCA-202ENST00000344627 C20orf144Q9BQM9 153 aa8.74□□□□□ -1.01
SGCA-202ENST00000344627 PCLOQ9Y6V0 5065 aa8.74□□□□□ -1.01
SGCA-202ENST00000344627 PKD1P98161 4303 aa8.73□□□□□ -1.01
SGCA-202ENST00000344627 SNURFLB1AK76 121 aa8.73□□□□□ -1.01
SGCA-202ENST00000344627 E5RGE8 158 aa8.73□□□□□ -1.01
SGCA-202ENST00000344627 PYYP10082 97 aa8.73□□□□□ -1.01
SGCA-202ENST00000344627 HIST1H1EP10412 219 aaKnown RBP8.73□□□□□ -1.01
SGCA-202ENST00000344627 BTF3P20290 206 aaKnown RBP8.73□□□□□ -1.01
SGCA-202ENST00000344627 CCL18P55774 89 aa8.73□□□□□ -1.01
SGCA-202ENST00000344627 ERCC8Q13216 396 aa8.73□□□□□ -1.01
SGCA-202ENST00000344627 OR5I1Q13606 314 aa8.73□□□□□ -1.01
SGCA-202ENST00000344627 CLINT1Q14677 625 aa8.73□□□□□ -1.01
SGCA-202ENST00000344627 OR5C1Q8NGR4 320 aa8.73□□□□□ -1.01
SGCA-202ENST00000344627 TRBV19A0A075B6N1 114 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 GAGE12BA1L429 117 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 M0R3E3 92 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 GAGE7O76087 117 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 GAGE12FP0CL80 117 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 GAGE12GP0CL81 117 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 GAGE12IP0CL82 117 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 GCSAMLQ5JQS6 135 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 RNASE8Q8TDE3 154 aaKnown RBP8.72□□□□□ -1.01
SGCA-202ENST00000344627 NPCDR1Q9BY65 106 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 NMES1Q9C002 83 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 AAMDCQ9H7C9 122 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 OR5AC2Q9NZP5 309 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 PRELID1Q9Y255 219 aa8.72□□□□□ -1.01
SGCA-202ENST00000344627 NPIPB6E9PJ23 425 aa8.71□□□□□ -1.02
SGCA-202ENST00000344627 SSNA1O43805 119 aa8.71□□□□□ -1.02
SGCA-202ENST00000344627 ZNF253O75346 499 aa8.71□□□□□ -1.02
SGCA-202ENST00000344627 CYCSP99999 105 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms