RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 GBGT1Q8N5D6 347 aa12.3□□□□□ -0.44
CEACAM1-202ENST00000344391 MS4A6AQ9H2W1 248 aa12.3□□□□□ -0.44
CEACAM1-202ENST00000344391 KLF12Q9Y4X4 402 aa12.3□□□□□ -0.44
CEACAM1-202ENST00000344391 VWFP04275 2813 aa12.3□□□□□ -0.44
CEACAM1-202ENST00000344391 TRBV20OR9-2A0A075B6H5 130 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 ISLRO14498 428 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 PF4P02776 101 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 CSN1S1P47710 185 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 PSG3Q16557 428 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 TMEM241Q24JQ0 296 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 DEFB114Q30KQ6 69 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 SAMD13Q5VXD3 122 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 GOLT1AQ6ZVE7 132 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 SVBPQ8N300 66 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 LINC00482Q8N8I6 264 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 DYNLRB2Q8TF09 96 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 MRPL53Q96EL3 112 aaKnown RBP12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 ZNF747Q9BV97 191 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 SDF2L1Q9HCN8 221 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 NAT8Q9UHE5 227 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 TRAV34A0A0B4J273 112 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 ZNF705FA8MVS1 300 aaPredicted RBP12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 C9JCJ5 164 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 TAS2R60P59551 318 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 TMEM183BQ1AE95 376 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 TVP23CQ96ET8 276 aa12.29□□□□□ -0.44
CEACAM1-202ENST00000344391 STAB1Q9NY15 2570 aa12.28□□□□□ -0.44
CEACAM1-202ENST00000344391 K7EQG2 157 aa12.28□□□□□ -0.44
CEACAM1-202ENST00000344391 PRB4P10163 310 aaPredicted RBP12.28□□□□□ -0.44
CEACAM1-202ENST00000344391 WFDC3Q8IUB2 231 aa12.28□□□□□ -0.44
CEACAM1-202ENST00000344391 TMEM158Q8WZ71 300 aa12.28□□□□□ -0.44
CEACAM1-202ENST00000344391 C20orf173Q96LM9 149 aa12.28□□□□□ -0.44
CEACAM1-202ENST00000344391 COL6A5A8TX70 2615 aa12.28□□□□□ -0.44
CEACAM1-202ENST00000344391 SERTM2A0A1B0GWG4 89 aa12.27□□□□□ -0.44
CEACAM1-202ENST00000344391 PRAC2D3DTV9 90 aa12.27□□□□□ -0.44
CEACAM1-202ENST00000344391 DNASE2O00115 360 aaPredicted RBP12.27□□□□□ -0.44
CEACAM1-202ENST00000344391 TSPAN4O14817 238 aa12.27□□□□□ -0.44
CEACAM1-202ENST00000344391 S100A9P06702 114 aaKnown RBP12.27□□□□□ -0.44
CEACAM1-202ENST00000344391 RBPMS2Q6ZRY4 209 aaKnown RBP12.27□□□□□ -0.44
CEACAM1-202ENST00000344391 TMEM61Q8N0U2 210 aa12.27□□□□□ -0.44
CEACAM1-202ENST00000344391 FMC1Q96HJ9 113 aa12.27□□□□□ -0.44
CEACAM1-202ENST00000344391 IGF2BP2-AS1Q96M15 143 aa12.27□□□□□ -0.44
CEACAM1-202ENST00000344391 PGPEP1LA6NFU8 196 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 K7EQM0 130 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 IGLV2-11P01706 119 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 ID1P41134 155 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 TFPI2P48307 235 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 UBE2G1P62253 170 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 RPL23P62829 140 aaKnown RBP12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 PAFAH1B2P68402 229 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 PNRC1Q12796 327 aaPredicted RBP12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 CD300EQ496F6 205 aaPredicted RBP12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 CENPWQ5EE01 88 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 TMEM75Q8N9X5 138 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 CLRN3Q8NCR9 226 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 SGK494Q96LW2 274 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 TRAV8-1A0A0A6YYK1 113 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 TRAV2A0A0B4J234 112 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 TRAV25A0A0B4J276 109 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 SNAPINO95295 136 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 GNG4P50150 75 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 OCC1Q8TAD7 63 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 LY96Q9Y6Y9 160 aa12.26□□□□□ -0.45
CEACAM1-202ENST00000344391 SORL1Q92673 2214 aa12.25□□□□□ -0.45
CEACAM1-202ENST00000344391 IGKV2-40A0A087WW87 121 aaPredicted RBP12.25□□□□□ -0.45
CEACAM1-202ENST00000344391 TRBV6-1A0A0K0K1D8 114 aa12.25□□□□□ -0.45
CEACAM1-202ENST00000344391 SAP30O75446 220 aa12.25□□□□□ -0.45
CEACAM1-202ENST00000344391 IGKV2D-40P01614 121 aaPredicted RBP12.25□□□□□ -0.45
CEACAM1-202ENST00000344391 ATRAIDQ6UW56 229 aa12.25□□□□□ -0.45
CEACAM1-202ENST00000344391 LINC01551Q86U37 167 aa12.25□□□□□ -0.45
CEACAM1-202ENST00000344391 FAM24BQ8N5W8 94 aa12.25□□□□□ -0.45
CEACAM1-202ENST00000344391 ZNF738Q8NE65 137 aa12.25□□□□□ -0.45
CEACAM1-202ENST00000344391 RBAKDNA6NC62 111 aa12.24□□□□□ -0.45
CEACAM1-202ENST00000344391 M0R036 132 aa12.24□□□□□ -0.45
CEACAM1-202ENST00000344391 IGLV2-8P01709 118 aa12.24□□□□□ -0.45
CEACAM1-202ENST00000344391 FLI1Q01543 452 aaPredicted RBP12.24□□□□□ -0.45
CEACAM1-202ENST00000344391 C12orf54Q6X4T0 127 aa12.24□□□□□ -0.45
CEACAM1-202ENST00000344391 Q86TA4 180 aa12.24□□□□□ -0.45
CEACAM1-202ENST00000344391 BAGE2Q86Y30 109 aa12.24□□□□□ -0.45
CEACAM1-202ENST00000344391 C3orf56Q8N813 242 aa12.24□□□□□ -0.45
CEACAM1-202ENST00000344391 PSG8Q9UQ74 426 aa12.24□□□□□ -0.45
CEACAM1-202ENST00000344391 IZUMO1RA6ND01 250 aa12.23□□□□□ -0.45
CEACAM1-202ENST00000344391 LTAP01374 205 aa12.23□□□□□ -0.45
CEACAM1-202ENST00000344391 IGLV1-51P01701 117 aa12.23□□□□□ -0.45
CEACAM1-202ENST00000344391 ADIRFQ15847 76 aa12.23□□□□□ -0.45
CEACAM1-202ENST00000344391 VGLL1Q99990 258 aa12.23□□□□□ -0.45
CEACAM1-202ENST00000344391 AURKAIP1Q9NWT8 199 aaPredicted RBP12.23□□□□□ -0.45
CEACAM1-202ENST00000344391 FBLL1A6NHQ2 334 aaKnown RBP12.22□□□□□ -0.45
CEACAM1-202ENST00000344391 ZNF688P0C7X2 276 aa12.22□□□□□ -0.45
CEACAM1-202ENST00000344391 SNRPD3P62318 126 aaKnown RBP12.22□□□□□ -0.45
CEACAM1-202ENST00000344391 SHISA2Q6UWI4 295 aa12.22□□□□□ -0.45
CEACAM1-202ENST00000344391 PRNTQ86SH4 94 aa12.22□□□□□ -0.45
CEACAM1-202ENST00000344391 SPAG8Q99932 426 aaPredicted RBP12.22□□□□□ -0.45
CEACAM1-202ENST00000344391 C7orf77A4D0Y5 90 aa12.22□□□□□ -0.45
CEACAM1-202ENST00000344391 K7EN84 100 aa12.22□□□□□ -0.45
CEACAM1-202ENST00000344391 SPATA3Q8NHX4 192 aa12.22□□□□□ -0.45
CEACAM1-202ENST00000344391 SMIM12Q96EX1 92 aa12.22□□□□□ -0.45
CEACAM1-202ENST00000344391 MLST8Q9BVC4 326 aa12.22□□□□□ -0.45
CEACAM1-202ENST00000344391 TRRAPQ9Y4A5 3859 aa12.22□□□□□ -0.45
CEACAM1-202ENST00000344391 B4DEV8 164 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms