RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 NAA38Q9BRA0 125 aaKnown RBP5.75□□□□□ -1.49
VCAN-202ENST00000342785 TMEM213A2RRL7 107 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 OVOL1O14753 267 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 SEC11AP67812 179 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 SEM1Q6ZVN7 128 aa5.75□□□□□ -1.49
VCAN-202ENST00000342785 A0A087X0K7 114 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 H7C1H1 209 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 LDLRAD2Q5SZI1 272 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 AMMECR1LQ6DCA0 310 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 THAP8Q8NA92 274 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 NPFFO15130 113 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 SRD5A1P18405 259 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 SSBP2P81877 361 aaPredicted RBP5.74□□□□□ -1.49
VCAN-202ENST00000342785 ORMDL2Q53FV1 153 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 MSRB2Q9Y3D2 182 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 KIF26AQ9ULI4 1882 aaPredicted RBP5.74□□□□□ -1.49
VCAN-202ENST00000342785 SMIM27A0A1W2PRY6 76 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 APOMO95445 188 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 IFI27P40305 119 aaPredicted RBP5.74□□□□□ -1.49
VCAN-202ENST00000342785 ZNF295-AS1Q8N0V1 137 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 OR9G4Q8NGQ1 327 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 JMJD8Q96S16 334 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 NAV3Q8IVL0 2385 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 ALPK3Q96L96 1907 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 BRWD1-AS2P59051 145 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 HSD52Q0P140 79 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 RCHY1Q96PM5 261 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 GEMIN7Q9H840 131 aaKnown RBP5.74□□□□□ -1.49
VCAN-202ENST00000342785 CYSLTR1Q9Y271 337 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 OBSL1O75147 1896 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 C22orf46C9J442 243 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 NUPR1O60356 82 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 WFDC12Q8WWY7 111 aa5.74□□□□□ -1.49
VCAN-202ENST00000342785 P0C879 139 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 PLA2G5P39877 138 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 ZC2HC1BQ5TFG8 222 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 MRPL52Q86TS9 123 aaKnown RBP5.73□□□□□ -1.49
VCAN-202ENST00000342785 MRPL16Q9NX20 251 aaKnown RBP5.73□□□□□ -1.49
VCAN-202ENST00000342785 MRPS16Q9Y3D3 137 aaKnown RBP5.73□□□□□ -1.49
VCAN-202ENST00000342785 TNFRSF18Q9Y5U5 241 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 IGKV1OR2-108A0A075B7D4 117 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 G3V318 75 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 IGKCP01834 107 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 A0A1B0GWB2 263 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 SAMD13Q5VXD3 122 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 MORN5Q5VZ52 161 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 SMPXQ9UHP9 88 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 FAM104BQ5XKR9 115 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 GTSCR1Q86UQ5 136 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 ATP6V0E1O15342 81 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 SNCGO76070 127 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 SFTA2Q6UW10 78 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 PATE2Q6UY27 113 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 ZNF491Q8N8L2 437 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 HIVEP3Q5T1R4 2406 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 IGLL1P15814 213 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 ERCC8Q13216 396 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 PRR25Q96S07 402 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 BEX4Q9NWD9 120 aaPredicted RBP5.73□□□□□ -1.49
VCAN-202ENST00000342785 TMEM14CQ9P0S9 112 aa5.73□□□□□ -1.49
VCAN-202ENST00000342785 PRRC2CQ9Y520 2896 aaKnown RBP5.73□□□□□ -1.49
VCAN-202ENST00000342785 HAX1O00165 279 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 ZNF688P0C7X2 276 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 PLXNB1O43157 2135 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 DNAH12Q6ZR08 3092 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 PSMB11A5LHX3 300 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 UBE2E1P51965 193 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 BCL6BQ8N143 479 aaPredicted RBP5.72□□□□□ -1.49
VCAN-202ENST00000342785 STPG4Q8N801 248 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 C8orf31Q8N9H6 132 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 GNLYP22749 145 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 C19orf54Q5BKX5 351 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 TMEM158Q8WZ71 300 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 PRSS22Q9GZN4 317 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 SMAGPQ0VAQ4 97 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 CD300EQ496F6 205 aaPredicted RBP5.72□□□□□ -1.49
VCAN-202ENST00000342785 TEX43Q6ZNM6 134 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 C14orf178Q8N769 122 aaPredicted RBP5.72□□□□□ -1.49
VCAN-202ENST00000342785 TMEM75Q8N9X5 138 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 FAM110DQ8TAY7 271 aaPredicted RBP5.72□□□□□ -1.49
VCAN-202ENST00000342785 TRBV7-1A0A0A6YYK4 115 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 IGKV1-17P01599 117 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 LAGE3Q14657 143 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 LINC01559Q495D7 138 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 ITLN2Q8WWU7 325 aaPredicted RBP5.72□□□□□ -1.49
VCAN-202ENST00000342785 DUX3Q96PT4 197 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 RHPN1-AS1Q9BWJ2 59 aa5.72□□□□□ -1.49
VCAN-202ENST00000342785 SHISA9B4DS77 424 aa5.71□□□□□ -1.49
VCAN-202ENST00000342785 OVOL3O00110 214 aa5.71□□□□□ -1.49
VCAN-202ENST00000342785 LINC00477Q96M19 166 aa5.71□□□□□ -1.49
VCAN-202ENST00000342785 DYSFO75923 2080 aa5.71□□□□□ -1.49
VCAN-202ENST00000342785 H3BRN7 92 aa5.71□□□□□ -1.49
VCAN-202ENST00000342785 CGB3P0DN86 165 aa5.71□□□□□ -1.49
VCAN-202ENST00000342785 CGB7P0DN87 165 aa5.71□□□□□ -1.49
VCAN-202ENST00000342785 GRNP28799 593 aaKnown RBP5.71□□□□□ -1.49
VCAN-202ENST00000342785 RRN3P1Q2M238 152 aa5.71□□□□□ -1.49
VCAN-202ENST00000342785 ARHGAP21Q5T5U3 1957 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 UBE2V1Q13404 147 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 RNF182Q8N6D2 247 aa5.71□□□□□ -1.5
VCAN-202ENST00000342785 C17orf77Q96MU5 243 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms