RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 LY96Q9Y6Y9 160 aa12.06□□□□□ -0.48
UBE3B-202ENST00000342494 LEPROTO15243 131 aa12.06□□□□□ -0.48
UBE3B-202ENST00000342494 Q6ZRM9 215 aa12.06□□□□□ -0.48
UBE3B-202ENST00000342494 HSD52Q0P140 79 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 DUX4L9Q6RFH8 374 aaPredicted RBP12.05□□□□□ -0.48
UBE3B-202ENST00000342494 TIMM21Q9BVV7 248 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 IGLV3-9A0A075B6K5 115 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 TRBV25-1A0A075B6N4 114 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 SMKR1H3BMG3 65 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 AMN1Q8IY45 258 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 DOCK8Q8NF50 2099 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 TRBV24-1A0A075B6N3 115 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 NDUFA4O00483 81 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 PAX9P55771 341 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 ZNF833PQ6ZTB9 187 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 SPXQ9BT56 116 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 CLDN16Q9Y5I7 305 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 LRRK1Q38SD2 2015 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 A8MWV9 139 aa12.05□□□□□ -0.48
UBE3B-202ENST00000342494 ANAPC10Q9UM13 185 aa12.04□□□□□ -0.48
UBE3B-202ENST00000342494 ETV2O00321 342 aaPredicted RBP12.04□□□□□ -0.48
UBE3B-202ENST00000342494 NDUFA4L2Q9NRX3 87 aa12.04□□□□□ -0.48
UBE3B-202ENST00000342494 MPDZO75970 2070 aa12.04□□□□□ -0.48
UBE3B-202ENST00000342494 ELANEP08246 267 aa12.04□□□□□ -0.48
UBE3B-202ENST00000342494 CGB7P0DN87 165 aa12.04□□□□□ -0.48
UBE3B-202ENST00000342494 TEX36Q5VZQ5 186 aa12.04□□□□□ -0.48
UBE3B-202ENST00000342494 CREBBPQ92793 2442 aa12.03□□□□□ -0.48
UBE3B-202ENST00000342494 TRAV8-4A0A0B4J246 113 aa12.03□□□□□ -0.48
UBE3B-202ENST00000342494 KIAA2026Q5HYC2 2103 aa12.03□□□□□ -0.48
UBE3B-202ENST00000342494 C1orf194Q5T5A4 169 aa12.03□□□□□ -0.48
UBE3B-202ENST00000342494 MRAPQ8TCY5 172 aa12.03□□□□□ -0.48
UBE3B-202ENST00000342494 NCOR1P1Q9H4R4 102 aa12.03□□□□□ -0.48
UBE3B-202ENST00000342494 TMEM14BQ9NUH8 114 aa12.03□□□□□ -0.48
UBE3B-202ENST00000342494 SRSF4Q08170 494 aaKnown RBP12.03□□□□□ -0.48
UBE3B-202ENST00000342494 HAPLN4Q86UW8 402 aa12.03□□□□□ -0.48
UBE3B-202ENST00000342494 IGHV1OR15-1A0A075B7D0 117 aa12.03□□□□□ -0.48
UBE3B-202ENST00000342494 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.02□□□□□ -0.484e-6■■□□□ 13.5
UBE3B-202ENST00000342494 IGKV1-6A0A0C4DH72 117 aa12.02□□□□□ -0.48
UBE3B-202ENST00000342494 IGLV1-44P01699 117 aa12.02□□□□□ -0.48
UBE3B-202ENST00000342494 C17orf58Q2M2W7 97 aa12.02□□□□□ -0.48
UBE3B-202ENST00000342494 A0A1B0GW64 132 aa12.02□□□□□ -0.48
UBE3B-202ENST00000342494 PFN1P07737 140 aaKnown RBP12.02□□□□□ -0.48
UBE3B-202ENST00000342494 RMI2Q96E14 147 aa12.02□□□□□ -0.49
UBE3B-202ENST00000342494 MRPL27Q9P0M9 148 aaKnown RBP12.02□□□□□ -0.49
UBE3B-202ENST00000342494 C8orf86Q6ZUL3 223 aa12.02□□□□□ -0.49
UBE3B-202ENST00000342494 CDKN1BP46527 198 aa12.02□□□□□ -0.49
UBE3B-202ENST00000342494 LINC00479Q96M42 142 aa12.02□□□□□ -0.49
UBE3B-202ENST00000342494 PRB1P04280 392 aa12.01□□□□□ -0.49
UBE3B-202ENST00000342494 CXCL1P09341 107 aa12.01□□□□□ -0.49
UBE3B-202ENST00000342494 LURAP1LQ8IV03 231 aa12.01□□□□□ -0.49
UBE3B-202ENST00000342494 LINC00311Q8N616 119 aa12.01□□□□□ -0.49
UBE3B-202ENST00000342494 FANCMQ8IYD8 2048 aa12.01□□□□□ -0.49
UBE3B-202ENST00000342494 LGALS1P09382 135 aaKnown RBP12.01□□□□□ -0.49
UBE3B-202ENST00000342494 SPAG8Q99932 426 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-202ENST00000342494 TMEM75Q8N9X5 138 aa12.01□□□□□ -0.49
UBE3B-202ENST00000342494 MEGF9Q9H1U4 602 aa12.01□□□□□ -0.49
UBE3B-202ENST00000342494 TRAV12-2A0A075B6T6 113 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 DLX4Q92988 240 aaPredicted RBP12□□□□□ -0.49
UBE3B-202ENST00000342494 DEFB113Q30KQ7 82 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 GSN-AS1Q9NRJ2 163 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 WDR86Q86TI4 376 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 NKAPP1Q8N9T2 125 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 TCF15Q12870 199 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 GUSBP1Q15486 140 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 DEFB112Q30KQ8 113 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 ZNF503-AS2A6NEH8 195 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 NDUFS7O75251 213 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 TNFRSF6BO95407 300 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 SAMD5Q5TGI4 173 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 BCL6BQ8N143 479 aaPredicted RBP12□□□□□ -0.49
UBE3B-202ENST00000342494 VPREB3Q9UKI3 123 aa12□□□□□ -0.49
UBE3B-202ENST00000342494 ZNRF2Q8NHG8 242 aa11.99□□□□□ -0.49
UBE3B-202ENST00000342494 TSSC4Q9Y5U2 329 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-202ENST00000342494 ZNF407Q9C0G0 2248 aa11.99□□□□□ -0.49
UBE3B-202ENST00000342494 FHL1Q13642 323 aa11.99□□□□□ -0.49
UBE3B-202ENST00000342494 VWC2Q2TAL6 325 aa11.99□□□□□ -0.49
UBE3B-202ENST00000342494 HIST1H2BLQ99880 126 aa11.99□□□□□ -0.49
UBE3B-202ENST00000342494 FAM120AOSQ5T036 256 aa11.99□□□□□ -0.49
UBE3B-202ENST00000342494 TRBV19A0A075B6N1 114 aa11.99□□□□□ -0.49
UBE3B-202ENST00000342494 ZC2HC1BQ5TFG8 222 aa11.99□□□□□ -0.49
UBE3B-202ENST00000342494 ZNF625Q96I27 306 aaPredicted RBP11.99□□□□□ -0.49
UBE3B-202ENST00000342494 SLX1AQ9BQ83 275 aa11.99□□□□□ -0.49
UBE3B-202ENST00000342494 GFRA4Q9GZZ7 299 aa11.99□□□□□ -0.49
UBE3B-202ENST00000342494 KLF12Q9Y4X4 402 aa11.99□□□□□ -0.49
UBE3B-202ENST00000342494 PHF3Q92576 2039 aaKnown RBP11.98□□□□□ -0.49
UBE3B-202ENST00000342494 C8orf49Q96NF6 230 aa11.98□□□□□ -0.49
UBE3B-202ENST00000342494 OVOL2Q9BRP0 275 aa11.98□□□□□ -0.49
UBE3B-202ENST00000342494 GRNP28799 593 aaKnown RBP11.98□□□□□ -0.49
UBE3B-202ENST00000342494 TMEM243Q9BU79 118 aa11.98□□□□□ -0.49
UBE3B-202ENST00000342494 IGHV4-59P01825 116 aa11.98□□□□□ -0.49
UBE3B-202ENST00000342494 IGHV2-5P01817 119 aa11.98□□□□□ -0.49
UBE3B-202ENST00000342494 NDUFAF3Q9BU61 184 aa11.98□□□□□ -0.49
UBE3B-202ENST00000342494 TP53TG1Q9Y2A0 90 aa11.98□□□□□ -0.49
UBE3B-202ENST00000342494 I3L3M4 83 aa11.98□□□□□ -0.49
UBE3B-202ENST00000342494 GAGE6Q13070 117 aa11.98□□□□□ -0.49
UBE3B-202ENST00000342494 RPL32P62910 135 aaKnown RBP11.97□□□□□ -0.49
UBE3B-202ENST00000342494 WISP1O95388 367 aa11.97□□□□□ -0.49
UBE3B-202ENST00000342494 TMEM126AQ9H061 195 aa11.97□□□□□ -0.49
UBE3B-202ENST00000342494 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.97□□□□□ -0.49
UBE3B-202ENST00000342494 TPSG1Q9NRR2 321 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms