RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 TMEM219Q86XT9 240 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 BCL6BQ8N143 479 aaPredicted RBP9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 RNF114Q9Y508 228 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 FRYLO94915 3013 aa9.94□□□□□ -0.82
SNRNP48-201ENST00000342415 A0A0G2JLM5 398 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 C19orf67A6NJJ6 358 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 C10orf142B7Z368 130 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 ZNF833PQ6ZTB9 187 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 RNASE8Q8TDE3 154 aaKnown RBP9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 PSG3Q16557 428 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 C15orf32Q32M92 178 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 Q6AWC8 147 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 PVRIGQ6DKI7 326 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 SCGB3A1Q96QR1 104 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 BEX4Q9NWD9 120 aaPredicted RBP9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 ZFYVE26Q68DK2 2539 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 NAV2Q8IVL1 2488 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 FAM231BA6NCW3 169 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 ITGB1BP1O14713 200 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 TRGV3P03979 118 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 TMEM249Q2WGJ8 235 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 TMEM170BQ5T4T1 132 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 TTC9CQ8N5M4 171 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 RNF182Q8N6D2 247 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 FAM167A-AS1Q96KT0 104 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 C22orf46C9J442 243 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 CTSZQ9UBR2 303 aa9.93□□□□□ -0.82
SNRNP48-201ENST00000342415 KIR3DS1Q14943 382 aa9.92□□□□□ -0.82
SNRNP48-201ENST00000342415 ZC2HC1BQ5TFG8 222 aa9.92□□□□□ -0.82
SNRNP48-201ENST00000342415 Q6ZS92 163 aa9.92□□□□□ -0.82
SNRNP48-201ENST00000342415 CST9LQ9H4G1 147 aa9.92□□□□□ -0.82
SNRNP48-201ENST00000342415 A0A1B0GWB2 263 aa9.92□□□□□ -0.82
SNRNP48-201ENST00000342415 HLA-DMBP28068 263 aa9.92□□□□□ -0.82
SNRNP48-201ENST00000342415 C22orf34Q6ZV56 151 aa9.92□□□□□ -0.82
SNRNP48-201ENST00000342415 SPRY2O43597 315 aa9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 GATA4P43694 442 aa9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 EMP1P54849 157 aa9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 TMEM155Q4W5P6 130 aa9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 MRPL16Q9NX20 251 aaKnown RBP9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 USP34Q70CQ2 3546 aa9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 ATP5G2Q06055 141 aa9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 SMAGPQ0VAQ4 97 aa9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 FAM231DQ6ZW35 169 aa9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 SPRY4Q9C004 299 aa9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 MS4A6AQ9H2W1 248 aa9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 LRP4O75096 1905 aa9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 FRYQ5TBA9 3013 aa9.91□□□□□ -0.82
SNRNP48-201ENST00000342415 HERVK_113P61574 105 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 POU2AF1Q16633 256 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 FAM120AOSQ5T036 256 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 SEM1Q6ZVN7 128 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 TRBV19A0A075B6N1 114 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 IGLC7A0M8Q6 106 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 IGLC1P0CG04 106 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 SAMD5Q5TGI4 173 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 GTSF1Q8WW33 167 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 TMEM158Q8WZ71 300 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 ZNF256Q9Y2P7 627 aaPredicted RBP9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 K7EMI3 77 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 RNASE4P34096 147 aaKnown RBP9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 C5orf64Q2M2E5 130 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 Q5PR19 223 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 SMIM12Q96EX1 92 aa9.9□□□□□ -0.82
SNRNP48-201ENST00000342415 A0A1B0GW15 77 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 LHBP01229 141 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 OCIAD2Q56VL3 154 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 LINC00322Q6ZN03 302 aaPredicted RBP9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 SHANK2-AS3Q9BTD1 123 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 ATG2AQ2TAZ0 1938 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 DGAT2L7PQ6IED9 249 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 CPAMD8Q8IZJ3 1885 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 CEP192Q8TEP8 1941 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 SEC11AP67812 179 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 GAGE1Q13065 139 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 GDF5OSQ5U4N7 250 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 PRSS33Q8NF86 280 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 EEF1AKMT3Q96AZ1 226 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 DPM2O94777 84 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 NDUFB8O95169 186 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 IGKCP01834 107 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 BVES-AS1Q5T3Y7 98 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 IGF2BP2-AS1Q96M15 143 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 TTTY13Q9BZ97 58 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 CYSLTR1Q9Y271 337 aa9.89□□□□□ -0.83
SNRNP48-201ENST00000342415 CD5LO43866 347 aa9.88□□□□□ -0.83
SNRNP48-201ENST00000342415 HSD52Q0P140 79 aa9.88□□□□□ -0.83
SNRNP48-201ENST00000342415 CD300EQ496F6 205 aaPredicted RBP9.88□□□□□ -0.83
SNRNP48-201ENST00000342415 SIGLEC8Q9NYZ4 499 aa9.88□□□□□ -0.83
SNRNP48-201ENST00000342415 TRAV26-2A0A0B4J265 109 aa9.88□□□□□ -0.83
SNRNP48-201ENST00000342415 ATP5LO75964 103 aa9.88□□□□□ -0.83
SNRNP48-201ENST00000342415 GTSF1LQ9H1H1 148 aa9.88□□□□□ -0.83
SNRNP48-201ENST00000342415 ZNF56Q15929 161 aa9.88□□□□□ -0.83
SNRNP48-201ENST00000342415 NUP37Q8NFH4 326 aa9.88□□□□□ -0.83
SNRNP48-201ENST00000342415 TRAV40A0A0B4J280 105 aa9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 NPYP01303 97 aa9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 IGLV2-8P01709 118 aa9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 DSPP15924 2871 aaKnown RBP9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 IGHV3-64A0A075B6Q5 118 aa9.87□□□□□ -0.83
SNRNP48-201ENST00000342415 ATP5J2P56134 94 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms