RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 GABRB1P18505 474 aa6.53□□□□□ -1.36
ATXN3-201ENST00000340660 ARPC4P59998 168 aa6.53□□□□□ -1.36
ATXN3-201ENST00000340660 TMPRSS11AQ6ZMR5 421 aa6.53□□□□□ -1.36
ATXN3-201ENST00000340660 H2BFWTQ7Z2G1 175 aa6.53□□□□□ -1.36
ATXN3-201ENST00000340660 RPUSD4Q96CM3 377 aaKnown RBP6.53□□□□□ -1.36
ATXN3-201ENST00000340660 GABARAPL1Q9H0R8 117 aa6.53□□□□□ -1.36
ATXN3-201ENST00000340660 ANXA10Q9UJ72 324 aa6.53□□□□□ -1.36
ATXN3-201ENST00000340660 MUC12Q9UKN1 5478 aa6.53□□□□□ -1.36
ATXN3-201ENST00000340660 PGLYRP1O75594 196 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-201ENST00000340660 IGKV1-39P01597 117 aa6.52□□□□□ -1.37
ATXN3-201ENST00000340660 IGKV1D-39P04432 117 aa6.52□□□□□ -1.37
ATXN3-201ENST00000340660 KRTAP1-4P0C5Y4 121 aa6.52□□□□□ -1.37
ATXN3-201ENST00000340660 MAPK3P27361 379 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-201ENST00000340660 C2orf76Q3KRA6 126 aa6.52□□□□□ -1.37
ATXN3-201ENST00000340660 TMEM17Q86X19 198 aa6.52□□□□□ -1.37
ATXN3-201ENST00000340660 NIT1Q86X76 327 aa6.52□□□□□ -1.37
ATXN3-201ENST00000340660 PHYHIPQ92561 330 aa6.52□□□□□ -1.37
ATXN3-201ENST00000340660 IGHV3-16A0A0C4DH30 117 aa6.51□□□□□ -1.37
ATXN3-201ENST00000340660 G3V2T6 193 aa6.51□□□□□ -1.37
ATXN3-201ENST00000340660 HTR2BP41595 481 aa6.51□□□□□ -1.37
ATXN3-201ENST00000340660 CBX5P45973 191 aa6.51□□□□□ -1.37
ATXN3-201ENST00000340660 RFX2P48378 723 aa6.51□□□□□ -1.37
ATXN3-201ENST00000340660 ZBTB8BQ8NAP8 495 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-201ENST00000340660 ZNF485Q8NCK3 441 aa6.51□□□□□ -1.37
ATXN3-201ENST00000340660 FAM3DQ96BQ1 224 aa6.51□□□□□ -1.37
ATXN3-201ENST00000340660 TMEM222Q9H0R3 208 aa6.51□□□□□ -1.37
ATXN3-201ENST00000340660 PLGRKTQ9HBL7 147 aa6.51□□□□□ -1.37
ATXN3-201ENST00000340660 IGKV1D-37A0A075B6S9 117 aa6.5□□□□□ -1.37
ATXN3-201ENST00000340660 TRAV1-1A0A0B4J248 108 aa6.5□□□□□ -1.37
ATXN3-201ENST00000340660 RGS10O43665 173 aa6.5□□□□□ -1.37
ATXN3-201ENST00000340660 TCRBP04435 133 aa6.5□□□□□ -1.37
ATXN3-201ENST00000340660 OR10J4P0C629 311 aa6.5□□□□□ -1.37
ATXN3-201ENST00000340660 CT45A10P0DMU9 189 aa6.5□□□□□ -1.37
ATXN3-201ENST00000340660 GADD45AP24522 165 aa6.5□□□□□ -1.37
ATXN3-201ENST00000340660 ATP6V1G3Q96LB4 118 aa6.5□□□□□ -1.37
ATXN3-201ENST00000340660 TMEM56-RWDD3S4R434 201 aa6.5□□□□□ -1.37
ATXN3-201ENST00000340660 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-201ENST00000340660 IGKV2-24A0A0C4DH68 120 aa6.49□□□□□ -1.37
ATXN3-201ENST00000340660 PRAC2D3DTV9 90 aa6.49□□□□□ -1.37
ATXN3-201ENST00000340660 TSPAN5P62079 268 aa6.49□□□□□ -1.37
ATXN3-201ENST00000340660 TMEM170AQ8WVE7 144 aa6.49□□□□□ -1.37
ATXN3-201ENST00000340660 NUDCD2Q8WVJ2 157 aa6.49□□□□□ -1.37
ATXN3-201ENST00000340660 CCDC124Q96CT7 223 aaKnown RBP6.49□□□□□ -1.37
ATXN3-201ENST00000340660 CENPNQ96H22 339 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-201ENST00000340660 OR51M1Q9H341 326 aa6.49□□□□□ -1.37
ATXN3-201ENST00000340660 RAB22AQ9UL26 194 aa6.49□□□□□ -1.37
ATXN3-201ENST00000340660 TRAV4A0A0B4J268 109 aa6.48□□□□□ -1.37
ATXN3-201ENST00000340660 C7orf71A4D174 169 aa6.48□□□□□ -1.37
ATXN3-201ENST00000340660 FABP12A6NFH5 140 aa6.48□□□□□ -1.37
ATXN3-201ENST00000340660 AQP12BA6NM10 295 aa6.48□□□□□ -1.37
ATXN3-201ENST00000340660 M0R2T5 61 aa6.48□□□□□ -1.37
ATXN3-201ENST00000340660 COX6A2Q02221 97 aa6.48□□□□□ -1.37
ATXN3-201ENST00000340660 KRTAP5-11Q6L8G4 156 aa6.48□□□□□ -1.37
ATXN3-201ENST00000340660 STEAP1BQ6NZ63 245 aa6.48□□□□□ -1.37
ATXN3-201ENST00000340660 AQP12AQ8IXF9 295 aa6.48□□□□□ -1.37
ATXN3-201ENST00000340660 OR4D5Q8NGN0 318 aa6.48□□□□□ -1.37
ATXN3-201ENST00000340660 RNASEH2CQ8TDP1 164 aaKnown RBP6.48□□□□□ -1.37
ATXN3-201ENST00000340660 RASL10AQ92737 203 aa6.48□□□□□ -1.37
ATXN3-201ENST00000340660 MRGPRFQ96AM1 343 aa6.48□□□□□ -1.37
ATXN3-201ENST00000340660 IGLV7-46A0A075B6I9 117 aa6.47□□□□□ -1.37
ATXN3-201ENST00000340660 SEC11BP0C7V7 166 aa6.47□□□□□ -1.37
ATXN3-201ENST00000340660 LEPP41159 167 aa6.47□□□□□ -1.37
ATXN3-201ENST00000340660 POLR2GP62487 172 aaKnown RBP eCLIP6.47□□□□□ -1.37
ATXN3-201ENST00000340660 BTN1A1Q13410 526 aa6.47□□□□□ -1.37
ATXN3-201ENST00000340660 ENHOQ6UWT2 76 aa6.47□□□□□ -1.37
ATXN3-201ENST00000340660 SLC25A29Q8N8R3 303 aa6.47□□□□□ -1.37
ATXN3-201ENST00000340660 FER1L6-AS1Q8NA97 138 aa6.47□□□□□ -1.37
ATXN3-201ENST00000340660 SNRPGP15A8MWD9 76 aa6.46□□□□□ -1.38
ATXN3-201ENST00000340660 SSX5O60225 188 aa6.46□□□□□ -1.38
ATXN3-201ENST00000340660 UBE2D1P51668 147 aa6.46□□□□□ -1.38
ATXN3-201ENST00000340660 ZNF138P52744 262 aa6.46□□□□□ -1.38
ATXN3-201ENST00000340660 Q0VG73 95 aa6.46□□□□□ -1.38
ATXN3-201ENST00000340660 OR4C5Q8NGB2 326 aa6.46□□□□□ -1.38
ATXN3-201ENST00000340660 LINC00477Q96M19 166 aa6.46□□□□□ -1.38
ATXN3-201ENST00000340660 GPR82Q96P67 336 aa6.46□□□□□ -1.38
ATXN3-201ENST00000340660 ODF3Q96PU9 254 aa6.46□□□□□ -1.38
ATXN3-201ENST00000340660 ENY2Q9NPA8 101 aa6.46□□□□□ -1.38
ATXN3-201ENST00000340660 AK6Q9Y3D8 172 aaKnown RBP6.46□□□□□ -1.38
ATXN3-201ENST00000340660 ZFP92A6NM28 416 aa6.45□□□□□ -1.38
ATXN3-201ENST00000340660 SLC25A5P05141 298 aaKnown RBP6.45□□□□□ -1.38
ATXN3-201ENST00000340660 RPL13AP40429 203 aaKnown RBP6.45□□□□□ -1.38
ATXN3-201ENST00000340660 RPS25P62851 125 aaKnown RBP6.45□□□□□ -1.38
ATXN3-201ENST00000340660 CDNFQ49AH0 187 aa6.45□□□□□ -1.38
ATXN3-201ENST00000340660 C2orf83Q53S99 150 aa6.45□□□□□ -1.38
ATXN3-201ENST00000340660 ETFRF1Q6IPR1 90 aa6.45□□□□□ -1.38
ATXN3-201ENST00000340660 DIRC1Q969H9 104 aa6.45□□□□□ -1.38
ATXN3-201ENST00000340660 H0Y9J4 135 aa6.44□□□□□ -1.38
ATXN3-201ENST00000340660 MPDU1O75352 247 aa6.44□□□□□ -1.38
ATXN3-201ENST00000340660 OR10G9Q8NGN4 311 aa6.44□□□□□ -1.38
ATXN3-201ENST00000340660 OR52I2Q8NH67 350 aa6.44□□□□□ -1.38
ATXN3-201ENST00000340660 MARCH1Q8TCQ1 289 aa6.44□□□□□ -1.38
ATXN3-201ENST00000340660 RAB21Q9UL25 225 aa6.44□□□□□ -1.38
ATXN3-201ENST00000340660 hDV102S1A0JD36 115 aa6.43□□□□□ -1.38
ATXN3-201ENST00000340660 KLLNB2CW77 178 aa6.43□□□□□ -1.38
ATXN3-201ENST00000340660 IFNA7P01567 189 aa6.43□□□□□ -1.38
ATXN3-201ENST00000340660 HLA-DMAP28067 261 aa6.43□□□□□ -1.38
ATXN3-201ENST00000340660 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-201ENST00000340660 KRTAP26-1Q6PEX3 210 aa6.43□□□□□ -1.38
ATXN3-201ENST00000340660 BPIFCQ8NFQ6 507 aa6.43□□□□□ -1.38
ATXN3-201ENST00000340660 MPLKIPQ8TAP9 179 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms