RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SPINK13Q1W4C9 94 aa11.06□□□□□ -0.64
UBE3B-201ENST00000340074 GNPNAT1Q96EK6 184 aaPredicted RBP11.06□□□□□ -0.64
UBE3B-201ENST00000340074 ST6GAL2Q96JF0 529 aa11.06□□□□□ -0.64
UBE3B-201ENST00000340074 CYTL1Q9NRR1 136 aa11.06□□□□□ -0.64
UBE3B-201ENST00000340074 M0R2Z0 102 aa11.05□□□□□ -0.64
UBE3B-201ENST00000340074 M0R3E3 92 aa11.05□□□□□ -0.64
UBE3B-201ENST00000340074 DEFB4AO15263 64 aa11.05□□□□□ -0.64
UBE3B-201ENST00000340074 HMGB3O15347 200 aaKnown RBP11.05□□□□□ -0.64
UBE3B-201ENST00000340074 JTBO76095 146 aa11.05□□□□□ -0.64
UBE3B-201ENST00000340074 UBE2L3P68036 154 aaKnown RBP11.05□□□□□ -0.64
UBE3B-201ENST00000340074 ZFAND6Q6FIF0 208 aa11.05□□□□□ -0.64
UBE3B-201ENST00000340074 KCNRGQ8N5I3 272 aa11.05□□□□□ -0.64
UBE3B-201ENST00000340074 RPP25LQ8N5L8 163 aaKnown RBP11.05□□□□□ -0.64
UBE3B-201ENST00000340074 Q8NAQ8 132 aa11.05□□□□□ -0.64
UBE3B-201ENST00000340074 IL17DQ8TAD2 202 aa11.05□□□□□ -0.64
UBE3B-201ENST00000340074 PHYHIPLQ96FC7 376 aa11.05□□□□□ -0.64
UBE3B-201ENST00000340074 AAMDCQ9H7C9 122 aa11.05□□□□□ -0.64
UBE3B-201ENST00000340074 IGHV3OR16-12A0A075B7B8 117 aa11.04□□□□□ -0.64
UBE3B-201ENST00000340074 BOLA2-SMG1P6H3BVE0 249 aa11.04□□□□□ -0.64
UBE3B-201ENST00000340074 MBP02144 154 aa11.04□□□□□ -0.64
UBE3B-201ENST00000340074 CDC34P49427 236 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-201ENST00000340074 ICAM4Q14773 271 aa11.04□□□□□ -0.64
UBE3B-201ENST00000340074 CASC10Q5T4H9 136 aa11.04□□□□□ -0.64
UBE3B-201ENST00000340074 ZNF705AQ6ZN79 300 aaPredicted RBP11.04□□□□□ -0.64
UBE3B-201ENST00000340074 OR10J6PQ8NGY7 276 aa11.04□□□□□ -0.64
UBE3B-201ENST00000340074 MRPL53Q96EL3 112 aaKnown RBP11.04□□□□□ -0.64
UBE3B-201ENST00000340074 ARPC5LQ9BPX5 153 aa11.04□□□□□ -0.64
UBE3B-201ENST00000340074 C11orf68Q9H3H3 251 aaKnown RBP11.04□□□□□ -0.64
UBE3B-201ENST00000340074 PPP1R14DQ9NXH3 145 aa11.04□□□□□ -0.64
UBE3B-201ENST00000340074 PRELID1Q9Y255 219 aa11.04□□□□□ -0.64
UBE3B-201ENST00000340074 hCG_2014768A0A024R1R8 64 aa11.03□□□□□ -0.64
UBE3B-201ENST00000340074 IGHV4-28A0A0C4DH34 117 aa11.03□□□□□ -0.64
UBE3B-201ENST00000340074 MIFP14174 115 aa11.03□□□□□ -0.64
UBE3B-201ENST00000340074 IGF2BP2-AS1Q96M15 143 aa11.03□□□□□ -0.64
UBE3B-201ENST00000340074 STARD9Q9P2P6 4700 aa11.03□□□□□ -0.64
UBE3B-201ENST00000340074 TRAV12-2A0A075B6T6 113 aa11.02□□□□□ -0.64
UBE3B-201ENST00000340074 A0A0D9SG52 128 aa11.02□□□□□ -0.64
UBE3B-201ENST00000340074 CRXO43186 299 aaPredicted RBP11.02□□□□□ -0.64
UBE3B-201ENST00000340074 AMBPP02760 352 aa11.02□□□□□ -0.64
UBE3B-201ENST00000340074 RBMY1A1P0DJD3 496 aaKnown RBP11.02□□□□□ -0.64
UBE3B-201ENST00000340074 RBMY1CP0DJD4 496 aa11.02□□□□□ -0.64
UBE3B-201ENST00000340074 RANP62826 216 aaKnown RBP11.02□□□□□ -0.64
UBE3B-201ENST00000340074 RBMY1FQ15415 496 aaKnown RBP11.02□□□□□ -0.64
UBE3B-201ENST00000340074 PQLC2Q6ZP29 291 aa11.02□□□□□ -0.64
UBE3B-201ENST00000340074 BAP18Q8IXM2 172 aa11.02□□□□□ -0.64
UBE3B-201ENST00000340074 C1orf158Q8N1D5 194 aa11.02□□□□□ -0.64
UBE3B-201ENST00000340074 RAB24Q969Q5 203 aa11.02□□□□□ -0.64
UBE3B-201ENST00000340074 TENM2Q9NT68 2774 aa11.02□□□□□ -0.65
UBE3B-201ENST00000340074 ARL14EPLP0DKL9 152 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 TCTE3Q8IZS6 198 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 Q9H3A6 140 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 GOLT1BQ9Y3E0 138 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 NPIPB6E9PJ23 425 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 INSP01308 110 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 STAG3L2P0CL84 134 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 STAG3L3P0CL85 134 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 CT45A10P0DMU9 189 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 CDKN1BP46527 198 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 ERCC8Q13216 396 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 SSX7Q7RTT5 188 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 LYPD1Q8N2G4 141 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 NEU1Q99519 415 aa11.01□□□□□ -0.65
UBE3B-201ENST00000340074 ACTR3CQ9C0K3 210 aaPredicted RBP11.01□□□□□ -0.65
UBE3B-201ENST00000340074 KANTRA0A1W2PQU2 76 aa11□□□□□ -0.65
UBE3B-201ENST00000340074 BCL2L11O43521 198 aa11□□□□□ -0.65
UBE3B-201ENST00000340074 TMEM208Q9BTX3 173 aa11□□□□□ -0.65
UBE3B-201ENST00000340074 IGKV2-40A0A087WW87 121 aaPredicted RBP10.99□□□□□ -0.65
UBE3B-201ENST00000340074 SMIM9A6NGZ8 99 aa10.99□□□□□ -0.65
UBE3B-201ENST00000340074 IGKV2D-40P01614 121 aaPredicted RBP10.99□□□□□ -0.65
UBE3B-201ENST00000340074 PMS2P11Q13670 270 aa10.99□□□□□ -0.65
UBE3B-201ENST00000340074 KIR3DS1Q14943 382 aa10.99□□□□□ -0.65
UBE3B-201ENST00000340074 ZNF726P1Q15940 193 aa10.99□□□□□ -0.65
UBE3B-201ENST00000340074 AKR1C8PQ5T2L2 129 aa10.99□□□□□ -0.65
UBE3B-201ENST00000340074 TMUB2Q71RG4 321 aa10.99□□□□□ -0.65
UBE3B-201ENST00000340074 C11orf45Q8TAV5 145 aa10.99□□□□□ -0.65
UBE3B-201ENST00000340074 ZNF471Q9BX82 626 aaPredicted RBP10.99□□□□□ -0.65
UBE3B-201ENST00000340074 PFDN1O60925 122 aa10.98□□□□□ -0.65
UBE3B-201ENST00000340074 GCHFRP30047 84 aa10.98□□□□□ -0.65
UBE3B-201ENST00000340074 CSN1S1P47710 185 aa10.98□□□□□ -0.65
UBE3B-201ENST00000340074 NANOS2P60321 138 aaKnown RBP10.98□□□□□ -0.65
UBE3B-201ENST00000340074 C9orf47Q6ZRZ4 202 aa10.98□□□□□ -0.65
UBE3B-201ENST00000340074 AKAP14Q86UN6 197 aa10.98□□□□□ -0.65
UBE3B-201ENST00000340074 HYLS1Q96M11 299 aa10.98□□□□□ -0.65
UBE3B-201ENST00000340074 ODF3Q96PU9 254 aa10.98□□□□□ -0.65
UBE3B-201ENST00000340074 VGLL1Q99990 258 aa10.98□□□□□ -0.65
UBE3B-201ENST00000340074 AGPAT4-IT1Q9H0P7 198 aa10.98□□□□□ -0.65
UBE3B-201ENST00000340074 OTORQ9NRC9 128 aa10.98□□□□□ -0.65
UBE3B-201ENST00000340074 A0A1B0GVG6 124 aa10.97□□□□□ -0.65
UBE3B-201ENST00000340074 PGPA6NDG6 321 aa10.97□□□□□ -0.65
UBE3B-201ENST00000340074 CXorf65A6NEN9 183 aa10.97□□□□□ -0.65
UBE3B-201ENST00000340074 J3KRW8 73 aa10.97□□□□□ -0.65
UBE3B-201ENST00000340074 CXorf1O96002 111 aa10.97□□□□□ -0.65
UBE3B-201ENST00000340074 HBE1P02100 147 aa10.97□□□□□ -0.65
UBE3B-201ENST00000340074 C1QBP02746 253 aa10.97□□□□□ -0.65
UBE3B-201ENST00000340074 PRM2P04554 102 aa10.97□□□□□ -0.65
UBE3B-201ENST00000340074 TSPOP30536 169 aa10.97□□□□□ -0.65
UBE3B-201ENST00000340074 LGALSLQ3ZCW2 172 aaPredicted RBP10.97□□□□□ -0.65
UBE3B-201ENST00000340074 LINC00477Q96M19 166 aa10.97□□□□□ -0.65
UBE3B-201ENST00000340074 CTXND1A0A1B0GTU2 59 aa10.96□□□□□ -0.65
UBE3B-201ENST00000340074 LEPP41159 167 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms