RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 ABCA2Q9BZC7 2435 aa12.81□□□□□ -0.36
CCNY-202ENST00000339497 CIRBPQ14011 172 aaKnown RBP12.81□□□□□ -0.36
CCNY-202ENST00000339497 TMEM262E9PQX1 116 aa12.81□□□□□ -0.36
CCNY-202ENST00000339497 STHQ8IWL8 128 aa12.81□□□□□ -0.36
CCNY-202ENST00000339497 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
CCNY-202ENST00000339497 TRAV12-3A0A0B4J271 114 aa12.81□□□□□ -0.36
CCNY-202ENST00000339497 A6NNC1 897 aa12.81□□□□□ -0.36
CCNY-202ENST00000339497 MSMBP08118 114 aa12.81□□□□□ -0.36
CCNY-202ENST00000339497 TMEM131Q92545 1883 aa12.81□□□□□ -0.36
CCNY-202ENST00000339497 SSBP2P81877 361 aaPredicted RBP12.81□□□□□ -0.36
CCNY-202ENST00000339497 CYSLTR1Q9Y271 337 aa12.81□□□□□ -0.36
CCNY-202ENST00000339497 TRBV19A0A075B6N1 114 aa12.8□□□□□ -0.36
CCNY-202ENST00000339497 DPM2O94777 84 aa12.8□□□□□ -0.36
CCNY-202ENST00000339497 MSMPQ1L6U9 139 aa12.8□□□□□ -0.36
CCNY-202ENST00000339497 TMEM249Q2WGJ8 235 aa12.8□□□□□ -0.36
CCNY-202ENST00000339497 C2CD3Q4AC94 2353 aa12.8□□□□□ -0.36
CCNY-202ENST00000339497 hDV102S1A0JD36 115 aa12.8□□□□□ -0.36
CCNY-202ENST00000339497 YPEL3P61236 119 aaPredicted RBP12.8□□□□□ -0.36
CCNY-202ENST00000339497 PDE6HQ13956 83 aa12.8□□□□□ -0.36
CCNY-202ENST00000339497 COTL1Q14019 142 aa12.8□□□□□ -0.36
CCNY-202ENST00000339497 USMG5Q96IX5 58 aa12.8□□□□□ -0.36
CCNY-202ENST00000339497 MRPL16Q9NX20 251 aaKnown RBP12.8□□□□□ -0.36
CCNY-202ENST00000339497 IGHV2-70DA0A0C4DH43 119 aa12.79□□□□□ -0.36
CCNY-202ENST00000339497 IGLC1P0CG04 106 aa12.79□□□□□ -0.36
CCNY-202ENST00000339497 SFTA2Q6UW10 78 aa12.79□□□□□ -0.36
CCNY-202ENST00000339497 RNF223E7ERA6 249 aa12.79□□□□□ -0.36
CCNY-202ENST00000339497 C14orf178Q8N769 122 aaPredicted RBP12.79□□□□□ -0.36
CCNY-202ENST00000339497 ORMDL2Q53FV1 153 aa12.79□□□□□ -0.36
CCNY-202ENST00000339497 FAM110DQ8TAY7 271 aaPredicted RBP12.79□□□□□ -0.36
CCNY-202ENST00000339497 MRAP2Q96G30 205 aa12.79□□□□□ -0.36
CCNY-202ENST00000339497 VCX2Q9H322 139 aa12.79□□□□□ -0.36
CCNY-202ENST00000339497 V9GYV3 84 aa12.79□□□□□ -0.36
CCNY-202ENST00000339497 H3BUT2 72 aa12.78□□□□□ -0.36
CCNY-202ENST00000339497 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
CCNY-202ENST00000339497 IGHV1-69DA0A0B4J2H0 117 aa12.78□□□□□ -0.36
CCNY-202ENST00000339497 IGKV3D-20A0A0C4DH25 116 aa12.78□□□□□ -0.36
CCNY-202ENST00000339497 TMEM213A2RRL7 107 aa12.78□□□□□ -0.36
CCNY-202ENST00000339497 IGHV1-69P01742 117 aa12.78□□□□□ -0.36
CCNY-202ENST00000339497 NHP2Q9NX24 153 aaKnown RBP12.78□□□□□ -0.36
CCNY-202ENST00000339497 MRPL27Q9P0M9 148 aaKnown RBP12.78□□□□□ -0.36
CCNY-202ENST00000339497 LINC00477Q96M19 166 aa12.77□□□□□ -0.36
CCNY-202ENST00000339497 C8orf49Q96NF6 230 aa12.77□□□□□ -0.36
CCNY-202ENST00000339497 PLXNB1O43157 2135 aa12.77□□□□□ -0.36
CCNY-202ENST00000339497 IGLC7A0M8Q6 106 aa12.77□□□□□ -0.36
CCNY-202ENST00000339497 IFI27P40305 119 aaPredicted RBP12.77□□□□□ -0.36
CCNY-202ENST00000339497 SYNJ2BPP57105 145 aa12.77□□□□□ -0.36
CCNY-202ENST00000339497 C18orf32Q8TCD1 76 aa12.77□□□□□ -0.36
CCNY-202ENST00000339497 FAM223BA6NKX1 122 aa12.77□□□□□ -0.37
CCNY-202ENST00000339497 FAM223AQ8IWN6 122 aa12.77□□□□□ -0.37
CCNY-202ENST00000339497 IGHV2-5P01817 119 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 IGF2-ASQ6U949 168 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 TMEM190Q8WZ59 177 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 DAZ1Q9NQZ3 744 aaKnown RBP12.76□□□□□ -0.37
CCNY-202ENST00000339497 TOMM7Q9P0U1 55 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 IGHV3-73A0A0B4J1V6 119 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 SYS1-DBNDD2H3BUS1 97 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 TYMSP04818 313 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 FXYD5Q96DB9 178 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 HIVEP3Q5T1R4 2406 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 IGKCP01834 107 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 CD300EQ496F6 205 aaPredicted RBP12.76□□□□□ -0.37
CCNY-202ENST00000339497 C11orf52Q96A22 123 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 SMIM12Q96EX1 92 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 LSM4Q9Y4Z0 139 aaKnown RBP12.76□□□□□ -0.37
CCNY-202ENST00000339497 SLC25A16P16260 332 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 SLAQ13239 276 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 LAGE3Q14657 143 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 LINC01356Q8N9X3 169 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 SPCS1Q9Y6A9 102 aa12.76□□□□□ -0.37
CCNY-202ENST00000339497 Q0VG73 95 aa12.75□□□□□ -0.37
CCNY-202ENST00000339497 TMEM8BA6NDV4 472 aa12.75□□□□□ -0.37
CCNY-202ENST00000339497 NDUFS8O00217 210 aa12.75□□□□□ -0.37
CCNY-202ENST00000339497 IGHV2-70P01814 119 aa12.75□□□□□ -0.37
CCNY-202ENST00000339497 HTN3P15516 51 aa12.75□□□□□ -0.37
CCNY-202ENST00000339497 SP5Q6BEB4 398 aaPredicted RBP12.75□□□□□ -0.37
CCNY-202ENST00000339497 GTSCR1Q86UQ5 136 aa12.75□□□□□ -0.37
CCNY-202ENST00000339497 C2orf88Q9BSF0 95 aa12.75□□□□□ -0.37
CCNY-202ENST00000339497 NSUN5P1Q3KNT7 163 aa12.75□□□□□ -0.37
CCNY-202ENST00000339497 C5orf30Q96GV9 206 aa12.75□□□□□ -0.37
CCNY-202ENST00000339497 TMEM101Q96IK0 257 aa12.74□□□□□ -0.37
CCNY-202ENST00000339497 VWC2Q2TAL6 325 aa12.74□□□□□ -0.37
CCNY-202ENST00000339497 Q6ZPA2 131 aa12.74□□□□□ -0.37
CCNY-202ENST00000339497 LCNL1Q6ZST4 164 aa12.74□□□□□ -0.37
CCNY-202ENST00000339497 CHTOPQ9Y3Y2 248 aaKnown RBP12.74□□□□□ -0.37
CCNY-202ENST00000339497 TRGV11A0A075B6L2 103 aa12.74□□□□□ -0.37
CCNY-202ENST00000339497 IGLV2-14P01704 120 aa12.74□□□□□ -0.37
CCNY-202ENST00000339497 ZNF492Q9P255 531 aa12.74□□□□□ -0.37
CCNY-202ENST00000339497 FAM120AOSQ5T036 256 aa12.74□□□□□ -0.37
CCNY-202ENST00000339497 CRIP3Q6Q6R5 217 aa12.74□□□□□ -0.37
CCNY-202ENST00000339497 LINC00469Q8N7U9 141 aa12.74□□□□□ -0.37
CCNY-202ENST00000339497 THAP8Q8NA92 274 aa12.74□□□□□ -0.37
CCNY-202ENST00000339497 IL17RELQ6ZVW7 336 aa12.73□□□□□ -0.37
CCNY-202ENST00000339497 C17orf77Q96MU5 243 aa12.73□□□□□ -0.37
CCNY-202ENST00000339497 GUSBP1Q15486 140 aa12.73□□□□□ -0.37
CCNY-202ENST00000339497 TMEM158Q8WZ71 300 aa12.73□□□□□ -0.37
CCNY-202ENST00000339497 NAA38Q9BRA0 125 aaKnown RBP12.73□□□□□ -0.37
CCNY-202ENST00000339497 ANKRD11Q6UB99 2663 aaPredicted RBP12.73□□□□□ -0.37
CCNY-202ENST00000339497 ZNF491Q8N8L2 437 aa12.73□□□□□ -0.37
CCNY-202ENST00000339497 TMEM75Q8N9X5 138 aa12.73□□□□□ -0.37
CCNY-202ENST00000339497 RITA1Q96K30 269 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms