RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 WI2-2373I1.2A0A1W2PRP0 233 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 TMEM213A2RRL7 107 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 C19orf71A6NCJ1 209 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 ZNF324O75467 553 aaPredicted RBP6.87□□□□□ -1.31
SNCA-201ENST00000336904 C3orf79P0CE67 100 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 ZNF80P51504 273 aaPredicted RBP6.87□□□□□ -1.31
SNCA-201ENST00000336904 UBE2E1P51965 193 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 SPATA12Q7Z6I5 190 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 NIT1Q86X76 327 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 TTC9CQ8N5M4 171 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 CCDC140Q96MF4 163 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 LOC389332A0A1B0GUA5 103 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 M0R2Z0 102 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 CHEK1O14757 476 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 HBBP68871 147 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 FAM231DQ6ZW35 169 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 URB1-AS1Q96HZ7 61 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 ALKBH7Q9BT30 221 aaPredicted RBP6.87□□□□□ -1.31
SNCA-201ENST00000336904 TRAV9-1A0A075B6T8 112 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 A8MWL6 223 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 AVPP01185 164 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 EDN2P20800 178 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 BLCAPP62952 87 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 Q0VG73 95 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 PSG3Q16557 428 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 REC114Q7Z4M0 266 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 AAMDCQ9H7C9 122 aa6.87□□□□□ -1.31
SNCA-201ENST00000336904 SMKR1H3BMG3 65 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 MT-ND6P03923 174 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 SRD5A1P18405 259 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 RELQ04864 619 aaPredicted RBP6.86□□□□□ -1.31
SNCA-201ENST00000336904 PRSS22Q9GZN4 317 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 RABAC1Q9UI14 185 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 TRBV9A0A0B4J1U6 114 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 H3BUX3 64 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 MINOS1Q5TGZ0 78 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 EBLN2Q6P2I7 272 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 Q8N976 141 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 BBC3Q96PG8 261 aaPredicted RBP6.86□□□□□ -1.31
SNCA-201ENST00000336904 VAMP8Q9BV40 100 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 THYN1Q9P016 225 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 TMEM14CQ9P0S9 112 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 MINOS1-NBL1R4GNA1 71 aa6.86□□□□□ -1.31
SNCA-201ENST00000336904 A0A1B0GXF2 115 aa6.85□□□□□ -1.31
SNCA-201ENST00000336904 FAM106AQ4KMX7 169 aa6.85□□□□□ -1.31
SNCA-201ENST00000336904 RBPMS2Q6ZRY4 209 aaKnown RBP6.85□□□□□ -1.31
SNCA-201ENST00000336904 KLK15Q9H2R5 256 aa6.85□□□□□ -1.31
SNCA-201ENST00000336904 MSRB1Q9NZV6 116 aa6.85□□□□□ -1.31
SNCA-201ENST00000336904 SH2D1AO60880 128 aa6.85□□□□□ -1.31
SNCA-201ENST00000336904 NCR2O95944 276 aa6.85□□□□□ -1.31
SNCA-201ENST00000336904 IGHG4P01861 327 aa6.85□□□□□ -1.31
SNCA-201ENST00000336904 C10orf99Q6UWK7 81 aa6.85□□□□□ -1.31
SNCA-201ENST00000336904 C5orf56Q8N8D9 126 aa6.85□□□□□ -1.31
SNCA-201ENST00000336904 WFDC12Q8WWY7 111 aa6.85□□□□□ -1.31
SNCA-201ENST00000336904 SNHG12Q9BXW3 62 aa6.85□□□□□ -1.31
SNCA-201ENST00000336904 OVOL3O00110 214 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 RPL11P62913 178 aaKnown RBP6.84□□□□□ -1.31
SNCA-201ENST00000336904 PAFAH1B2P68402 229 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 LYZL1Q6UWQ5 148 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 UNQ9165/PRO28630Q6UXU0 137 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 WFDC3Q8IUB2 231 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 ZNF502Q8TBZ5 544 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 DUX5Q96PT3 197 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 NDUFAF3Q9BU61 184 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 ACANP16112 2415 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 GAS8-AS1O95177 125 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 TRGV3P03979 118 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 OR10J3Q5JRS4 329 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 DMRTA1Q5VZB9 504 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 IL17RELQ6ZVW7 336 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 PIFOQ8TCI5 191 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 BORCS7Q96B45 105 aa6.84□□□□□ -1.31
SNCA-201ENST00000336904 NIPBLQ6KC79 2804 aaeCLIP6.84□□□□□ -1.31
SNCA-201ENST00000336904 ORM1P02763 201 aa6.84□□□□□ -1.32
SNCA-201ENST00000336904 IGF1P05019 195 aa6.84□□□□□ -1.32
SNCA-201ENST00000336904 CT45A10P0DMU9 189 aa6.84□□□□□ -1.32
SNCA-201ENST00000336904 G0S2P27469 103 aa6.84□□□□□ -1.32
SNCA-201ENST00000336904 CSN1S1P47710 185 aa6.84□□□□□ -1.32
SNCA-201ENST00000336904 EBI3Q14213 229 aa6.84□□□□□ -1.32
SNCA-201ENST00000336904 SPATA45Q537H7 98 aa6.84□□□□□ -1.32
SNCA-201ENST00000336904 C1orf122Q6ZSJ8 110 aa6.84□□□□□ -1.32
SNCA-201ENST00000336904 AMN1Q8IY45 258 aa6.84□□□□□ -1.32
SNCA-201ENST00000336904 GLMPQ8WWB7 406 aa6.84□□□□□ -1.32
SNCA-201ENST00000336904 CLPSL1A2RUU4 121 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 K7EQM0 130 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 TFPI2P48307 235 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 LOXL1Q08397 574 aaPredicted RBP6.83□□□□□ -1.32
SNCA-201ENST00000336904 C1orf194Q5T5A4 169 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 PIMREGQ9BSJ6 248 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 HIF1ANQ9NWT6 349 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 TRAV30A0A087WSZ9 112 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 IGHV1-69DA0A0B4J2H0 117 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 FAM181BA6NEQ2 426 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 IGHV1-69P01742 117 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 CLEC2AQ6UVW9 174 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 FAM110DQ8TAY7 271 aaPredicted RBP6.83□□□□□ -1.32
SNCA-201ENST00000336904 DEFB104AQ8WTQ1 72 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 SRSF8Q9BRL6 282 aaKnown RBP6.83□□□□□ -1.32
SNCA-201ENST00000336904 ZFAND3Q9H8U3 227 aa6.83□□□□□ -1.32
SNCA-201ENST00000336904 CHD6Q8TD26 2715 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms