RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 C9orf139Q6ZV77 190 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 IL17RELQ6ZVW7 336 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 TRAV40A0A0B4J280 105 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 SHISA3A0PJX4 238 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 CEACAM8P31997 349 aaPredicted RBP5.08□□□□□ -1.6
CSMD1-201ENST00000335551 TMEM92Q6UXU6 159 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 ZNF329Q86UD4 541 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 PMS2P5A8MQ11 134 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 TMEM14EPQ6UXP3 125 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 NEU4Q8WWR8 484 aaPredicted RBP5.08□□□□□ -1.6
CSMD1-201ENST00000335551 MESP1Q9BRJ9 268 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 CELA3AP09093 270 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 SIGLEC12Q96PQ1 595 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 PLA2G2FQ9BZM2 168 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 TRAV12-1A0A0B4J245 112 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 IGKV1D-13A0A0B4J2D9 117 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 CLPSL1A2RUU4 121 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 H3BMG7 143 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 WNT2P09544 360 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 IGKV1-13P0DP09 117 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 Q8N8P6 123 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 ZNF501Q96CX3 271 aaPredicted RBP5.08□□□□□ -1.6
CSMD1-201ENST00000335551 VSIRQ9H7M9 311 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 TRGV1A0A0A0MS02 117 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 K7ERJ3 54 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 CCL4P13236 92 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 PPIFP30405 207 aaKnown RBP5.08□□□□□ -1.6
CSMD1-201ENST00000335551 NMSQ5H8A3 153 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 SMRP1Q8NCR6 262 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 CTHRC1Q96CG8 243 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 ORMDL1Q9P0S3 153 aa5.08□□□□□ -1.6
CSMD1-201ENST00000335551 RHODO00212 210 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 HLA-DRB4P13762 266 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 PRSS57Q6UWY2 283 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 HLA-DRB4X5D2U9 266 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 RPP25LQ8N5L8 163 aaKnown RBP5.07□□□□□ -1.6
CSMD1-201ENST00000335551 THAP8Q8NA92 274 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 WFDC9Q8NEX5 89 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 CYTL1Q9NRR1 136 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 PKIGQ9Y2B9 76 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 IGHV2-70DA0A0C4DH43 119 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 CECR9P0C854 216 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 V9GYY9 64 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 ADAMTS7Q9UKP4 1686 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 IGHV2OR16-5A0A0B4J2B6 119 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 FUSP35637 526 aaKnown RBP eCLIP5.07□□□□□ -1.6
CSMD1-201ENST00000335551 Q6ZWC4 215 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 NRTNQ99748 197 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 I3L3M4 83 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 PRSS46E5RG02 174 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 METRNQ9UJH8 293 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 F8VRH5 84 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 TAX1BP3O14907 124 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 COX6A1P12074 109 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 IGLV3-21P80748 117 aaPredicted RBP5.07□□□□□ -1.6
CSMD1-201ENST00000335551 HGFACQ04756 655 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 PPP1R32Q7Z5V6 425 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 TP53TG1Q9Y2A0 90 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 LHBP01229 141 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 SLC25A16P16260 332 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 SUPT4H1P63272 117 aaKnown RBP5.07□□□□□ -1.6
CSMD1-201ENST00000335551 BSPH1Q075Z2 132 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 SCRT2Q9NQ03 307 aa5.07□□□□□ -1.6
CSMD1-201ENST00000335551 RPL15P61313 204 aaKnown RBP5.06□□□□□ -1.6
CSMD1-201ENST00000335551 LGALS9BQ3B8N2 356 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 LGALS9CQ6DKI2 356 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 FAM216BQ8N7L0 139 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 LIME1Q9H400 295 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 IGHV3-73A0A0B4J1V6 119 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 ZMAT4Q9H898 229 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 IGFBP6P24592 240 aaPredicted RBP5.06□□□□□ -1.6
CSMD1-201ENST00000335551 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.06□□□□□ -1.6
CSMD1-201ENST00000335551 FAM104BQ5XKR9 115 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 FAM236AA0A1B0GUQ0 79 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 FAM236BA0A1B0GV22 79 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 A0A1B0GX51 115 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 CELA2AP08217 269 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 FXYD7P58549 80 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 FAM168AQ92567 244 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 IGHV2-5P01817 119 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 ADCYAP1P18509 176 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 TRAV25A0A0B4J276 109 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 COLCA1Q6ZS62 124 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 SMIM27A0A1W2PRY6 76 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 PRSS47A8MTI9 375 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 IGHV3-11P01762 117 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 NDUFS5O43920 106 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 KLF5Q13887 457 aaPredicted RBP5.06□□□□□ -1.6
CSMD1-201ENST00000335551 CDCP2Q5VXM1 449 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 USMG5Q96IX5 58 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 NDUFA12Q9UI09 145 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 RNF5Q99942 180 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 SRSF8Q9BRL6 282 aaKnown RBP5.06□□□□□ -1.6
CSMD1-201ENST00000335551 RFNGQ9Y644 331 aa5.06□□□□□ -1.6
CSMD1-201ENST00000335551 K7EMI3 77 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 C10orf91Q5T1B1 145 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 NPYP01303 97 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 IL9P15248 144 aa5.05□□□□□ -1.6
CSMD1-201ENST00000335551 SIGLEC8Q9NYZ4 499 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms