RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 C8orf87E5RJ46 101 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 CCDC179H3BU77 68 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 CD55P08174 381 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 C5orf38Q86SI9 138 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 BMPERQ8N8U9 685 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 A0A087WX48 190 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 UMODL1-AS1Q8N2C9 162 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 FXYD5Q96DB9 178 aa4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 PRB4P10163 310 aaPredicted RBP4.99□□□□□ -1.61
CDC42BPA-201ENST00000334218 ADAMTS7Q9UKP4 1686 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 E9PQ18 207 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 C8orf49Q96NF6 230 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 NMSQ5H8A3 153 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 CHCHD5Q9BSY4 110 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 F8VRH5 84 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 MSRB3Q8IXL7 192 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 AGPAT4-IT1Q9H0P7 198 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 DAZ1Q9NQZ3 744 aaKnown RBP4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 C21orf62Q9NYP8 219 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 TRAV14DV4A0A0A6YYC5 116 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 PLAC8L1A1L4L8 177 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 LINC00694P0DN24 101 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 DEFB134Q4QY38 66 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 Q9H3A6 140 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 EP300Q09472 2414 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 PRM2P04554 102 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 CD28P10747 220 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 MDKP21741 143 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 FAM53BQ14153 422 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 PIFOQ8TCI5 191 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 RETNLBQ9BQ08 111 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 WDR90Q96KV7 1748 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 TRBV27A0A0K0K1C4 114 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 A0A1W2PNR3 127 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 CFC1BP0CG36 223 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 CFC1P0CG37 223 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 UBE2D1P51668 147 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 ZC2HC1BQ5TFG8 222 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 FBLIM1Q8WUP2 373 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 LOC285556D6RIA3 1793 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 CCL1P22362 96 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 HRCT1Q6UXD1 115 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 LINC01465Q8N7H1 131 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 SP7Q8TDD2 431 aaPredicted RBP4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 TMEM133Q9H2Q1 129 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 LYPD1Q8N2G4 141 aa4.98□□□□□ -1.61
CDC42BPA-201ENST00000334218 C12orf77C9JDV5 145 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 SPRY2O43597 315 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 RPL15P61313 204 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 FXYD3Q14802 87 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 LYZL2Q7Z4W2 148 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 FAM60AQ9NP50 221 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 J3QW42 95 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 ZNF561-AS1K7EIQ3 104 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 TNRC6BQ9UPQ9 1833 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 CD27P26842 260 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 ZC3H3Q8IXZ2 948 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 MDFIQ99750 246 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 DCTN5Q9BTE1 182 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 VSIG8P0DPA2 414 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 UPK3BQ9BT76 320 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 TRAV7A0A075B6U4 112 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 NREPQ16612 68 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 FAM19A3Q7Z5A8 133 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 Q8N976 141 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 CAMK2N2Q96S95 79 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 MCRIP2Q9BUT9 160 aaKnown RBP4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 CELA1Q9UNI1 258 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 H0Y8X5 98 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 EPPINO95925 133 aa4.97□□□□□ -1.61
CDC42BPA-201ENST00000334218 KLK8O60259 260 aa4.96□□□□□ -1.61
CDC42BPA-201ENST00000334218 UBE2D2P62837 147 aa4.96□□□□□ -1.61
CDC42BPA-201ENST00000334218 NAA38Q9BRA0 125 aaKnown RBP4.96□□□□□ -1.61
CDC42BPA-201ENST00000334218 RAI1Q7Z5J4 1906 aaPredicted RBP4.96□□□□□ -1.61
CDC42BPA-201ENST00000334218 ALKAL1Q6UXT8 129 aa4.96□□□□□ -1.61
CDC42BPA-201ENST00000334218 TNRC6CQ9HCJ0 1690 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 WFDC12Q8WWY7 111 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 C1orf210Q8IVY1 113 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 TMEFF2Q9UIK5 374 aaPredicted RBP4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 CR1LQ2VPA4 569 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 SPSB3Q6PJ21 355 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 RCHY1Q96PM5 261 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 INS-IGF2F8WCM5 200 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 INSP01308 110 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 GLI4P10075 376 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 PRR20EP86478 221 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 PRR20CP86479 221 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 PRR20DP86480 221 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 PRR20BP86481 221 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 PRR20AP86496 221 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 HIST2H2BCQ6DN03 193 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 HIST2H2BDQ6DRA6 164 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 ZCCHC24Q8N2G6 241 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 PAX9P55771 341 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 TRBV6-7A0A0A0MS04 114 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 FOXE3Q13461 319 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 NKG7Q16617 165 aa4.96□□□□□ -1.62
CDC42BPA-201ENST00000334218 GAFA1Q96PS6 74 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms