RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ICAM4Q14773 271 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 C10orf113Q5VZT2 155 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 CDPF1Q6NVV7 123 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 OR10G9Q8NGN4 311 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 OR10G7Q8NGN6 311 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 RABAC1Q9UI14 185 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 HIGD1AQ9Y241 93 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 SMAD5-AS1Q9Y6J3 95 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 BUB3O43684 328 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 ERVFC1-1P60608 527 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 ZNF664Q8N3J9 261 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 FAM167A-AS1Q96KT0 104 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 PYGO2Q9BRQ0 406 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 SLC25A2Q9BXI2 301 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 DNAJC4Q9NNZ3 241 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 SMPXQ9UHP9 88 aa12.47□□□□□ -0.41
SHOX-201ENST00000334060 NOTCH1P46531 2555 aa12.46□□□□□ -0.41
SHOX-201ENST00000334060 SAP30O75446 220 aa12.46□□□□□ -0.41
SHOX-201ENST00000334060 NPPCP23582 126 aa12.46□□□□□ -0.41
SHOX-201ENST00000334060 FGF8P55075 233 aaPredicted RBP12.46□□□□□ -0.41
SHOX-201ENST00000334060 ACOT6Q3I5F7 207 aaPredicted RBP12.46□□□□□ -0.41
SHOX-201ENST00000334060 OXLD1Q5BKU9 147 aa12.46□□□□□ -0.41
SHOX-201ENST00000334060 RARRES2Q99969 163 aa12.46□□□□□ -0.41
SHOX-201ENST00000334060 SHANK2-AS3Q9BTD1 123 aa12.46□□□□□ -0.41
SHOX-201ENST00000334060 ZNF727A8MUV8 499 aa12.45□□□□□ -0.42
SHOX-201ENST00000334060 IGFL4Q6B9Z1 124 aa12.45□□□□□ -0.42
SHOX-201ENST00000334060 METTL26Q96S19 204 aa12.45□□□□□ -0.42
SHOX-201ENST00000334060 LOC102723971A0A1B0GUV8 181 aa12.45□□□□□ -0.42
SHOX-201ENST00000334060 M0QZ24 198 aa12.45□□□□□ -0.42
SHOX-201ENST00000334060 IFNA1P01562 189 aa12.45□□□□□ -0.42
SHOX-201ENST00000334060 OR10J4P0C629 311 aa12.45□□□□□ -0.42
SHOX-201ENST00000334060 FAM3BP58499 235 aaPredicted RBP12.45□□□□□ -0.42
SHOX-201ENST00000334060 GBGT1Q8N5D6 347 aa12.45□□□□□ -0.42
SHOX-201ENST00000334060 UFC1Q9Y3C8 167 aa12.45□□□□□ -0.42
SHOX-201ENST00000334060 NBEAL1Q6ZS30 2694 aa12.45□□□□□ -0.42
SHOX-201ENST00000334060 MRPS12O15235 138 aaKnown RBP12.44□□□□□ -0.42
SHOX-201ENST00000334060 AMBPP02760 352 aa12.44□□□□□ -0.42
SHOX-201ENST00000334060 C8orf88P0DMB2 117 aa12.44□□□□□ -0.42
SHOX-201ENST00000334060 CD300EQ496F6 205 aaPredicted RBP12.44□□□□□ -0.42
SHOX-201ENST00000334060 TMEM41BQ5BJD5 291 aa12.44□□□□□ -0.42
SHOX-201ENST00000334060 GLMPQ8WWB7 406 aa12.44□□□□□ -0.42
SHOX-201ENST00000334060 K7EMT4 169 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 RANP62826 216 aaKnown RBP12.43□□□□□ -0.42
SHOX-201ENST00000334060 C1orf194Q5T5A4 169 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 GFI1BQ5VTD9 330 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 LCN15Q6UWW0 184 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 TMEM61Q8N0U2 210 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 CYB561D1Q8N8Q1 229 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 FUT9Q9Y231 359 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 GOLT1BQ9Y3E0 138 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 SORL1Q92673 2214 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 SCGB2A1O75556 95 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 CD33P20138 364 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 TFPI2P48307 235 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 DEFB1P60022 68 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 SERF2P84101 59 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 C16orf54Q6UWD8 224 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 GATAD1Q8WUU5 269 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 IMMP2LQ96T52 175 aa12.43□□□□□ -0.42
SHOX-201ENST00000334060 SLC17A3O00476 420 aa12.42□□□□□ -0.42
SHOX-201ENST00000334060 DLEU1O43261 78 aa12.42□□□□□ -0.42
SHOX-201ENST00000334060 GP9P14770 177 aa12.42□□□□□ -0.42
SHOX-201ENST00000334060 CCL20P78556 96 aa12.42□□□□□ -0.42
SHOX-201ENST00000334060 KRTAP21-3Q3LHN1 58 aa12.42□□□□□ -0.42
SHOX-201ENST00000334060 WFDC9Q8NEX5 89 aa12.42□□□□□ -0.42
SHOX-201ENST00000334060 SDF2L1Q9HCN8 221 aa12.42□□□□□ -0.42
SHOX-201ENST00000334060 URGCP-MRPS24S4R325 110 aa12.42□□□□□ -0.42
SHOX-201ENST00000334060 G3V4G9 280 aa12.41□□□□□ -0.42
SHOX-201ENST00000334060 HLA-DMBP28068 263 aa12.41□□□□□ -0.42
SHOX-201ENST00000334060 CDC34P49427 236 aaPredicted RBP12.41□□□□□ -0.42
SHOX-201ENST00000334060 DEFB114Q30KQ6 69 aa12.41□□□□□ -0.42
SHOX-201ENST00000334060 FAM90A2PQ658T7 463 aa12.41□□□□□ -0.42
SHOX-201ENST00000334060 PEMTQ9UBM1 199 aa12.41□□□□□ -0.42
SHOX-201ENST00000334060 ARL14EPLP0DKL9 152 aa12.41□□□□□ -0.42
SHOX-201ENST00000334060 PDZD11Q5EBL8 140 aa12.41□□□□□ -0.42
SHOX-201ENST00000334060 TCF24Q7RTU0 167 aa12.41□□□□□ -0.42
SHOX-201ENST00000334060 WFDC3Q8IUB2 231 aa12.41□□□□□ -0.42
SHOX-201ENST00000334060 OR8I2Q8N0Y5 310 aa12.41□□□□□ -0.42
SHOX-201ENST00000334060 OR1L4Q8NGR5 311 aa12.41□□□□□ -0.42
SHOX-201ENST00000334060 MBD3L1Q8WWY6 194 aa12.4□□□□□ -0.42
SHOX-201ENST00000334060 TECRQ9NZ01 308 aaKnown RBP12.4□□□□□ -0.42
SHOX-201ENST00000334060 NAT8Q9UHE5 227 aa12.4□□□□□ -0.42
SHOX-201ENST00000334060 KIR2DL5BA0A0G2JN68 375 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 KIR2DL5BA0A0G2JPC4 375 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 TYMSP04818 313 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 BCL2P10415 239 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 RPL11P62913 178 aaKnown RBP12.39□□□□□ -0.43
SHOX-201ENST00000334060 TMEM241Q24JQ0 296 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 KIR2DL5AQ8N109 375 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 ANAPC16Q96DE5 110 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 KCNIP2Q9NS61 270 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 ZNF586Q9NXT0 402 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 XKRY2A2RUG3 117 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 OR7C2O60412 319 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 IGLV1-51P01701 117 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 RHOBP62745 196 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 SIGLEC15Q6ZMC9 328 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 DYNLRB2Q8TF09 96 aa12.39□□□□□ -0.43
SHOX-201ENST00000334060 BLNKQ8WV28 456 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms