RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TNFRSF14Q92956 283 aa18.58■□□□□ 0.57
TSKU-201ENST00000333090 CSTL1Q9H114 145 aa18.58■□□□□ 0.57
TSKU-201ENST00000333090 A0A0G2JNJ9 132 aa18.58■□□□□ 0.56
TSKU-201ENST00000333090 A1L4Q6 167 aa18.58■□□□□ 0.56
TSKU-201ENST00000333090 H3BRM9 83 aa18.58■□□□□ 0.56
TSKU-201ENST00000333090 SMAD7O15105 426 aaKnown RBP18.58■□□□□ 0.56
TSKU-201ENST00000333090 KIR3DS1Q14943 382 aa18.58■□□□□ 0.56
TSKU-201ENST00000333090 UFSP1Q6NVU6 142 aa18.58■□□□□ 0.56
TSKU-201ENST00000333090 IGFL3Q6UXB1 125 aa18.58■□□□□ 0.56
TSKU-201ENST00000333090 BCL6BQ8N143 479 aaPredicted RBP18.58■□□□□ 0.56
TSKU-201ENST00000333090 Q9UFV3 132 aa18.58■□□□□ 0.56
TSKU-201ENST00000333090 HBDP02042 147 aa18.58■□□□□ 0.56
TSKU-201ENST00000333090 RAB37Q96AX2 223 aa18.58■□□□□ 0.56
TSKU-201ENST00000333090 SMKR1H3BMG3 65 aa18.57■□□□□ 0.56
TSKU-201ENST00000333090 MRPL51Q4U2R6 128 aaKnown RBP18.57■□□□□ 0.56
TSKU-201ENST00000333090 NBASA2RRP1 2371 aa18.57■□□□□ 0.56
TSKU-201ENST00000333090 NMUP48645 174 aa18.57■□□□□ 0.56
TSKU-201ENST00000333090 WFDC3Q8IUB2 231 aa18.57■□□□□ 0.56
TSKU-201ENST00000333090 FER1L6-AS1Q8NA97 138 aa18.57■□□□□ 0.56
TSKU-201ENST00000333090 AAMDCQ9H7C9 122 aa18.57■□□□□ 0.56
TSKU-201ENST00000333090 U3KQK5 164 aa18.57■□□□□ 0.56
TSKU-201ENST00000333090 MRPS12O15235 138 aaKnown RBP18.56■□□□□ 0.56
TSKU-201ENST00000333090 SH2D1AO60880 128 aa18.56■□□□□ 0.56
TSKU-201ENST00000333090 PRSS57Q6UWY2 283 aa18.56■□□□□ 0.56
TSKU-201ENST00000333090 TLN1Q9Y490 2541 aaKnown RBP18.56■□□□□ 0.56
TSKU-201ENST00000333090 HSD52Q0P140 79 aa18.56■□□□□ 0.56
TSKU-201ENST00000333090 KLF17Q5JT82 389 aaPredicted RBP18.56■□□□□ 0.56
TSKU-201ENST00000333090 RALYQ9UKM9 306 aaKnown RBP18.56■□□□□ 0.56
TSKU-201ENST00000333090 PCP2Q8IVA1 136 aa18.55■□□□□ 0.56
TSKU-201ENST00000333090 IFI27L1Q96BM0 104 aa18.55■□□□□ 0.56
TSKU-201ENST00000333090 A0A0G2JLM5 398 aa18.55■□□□□ 0.56
TSKU-201ENST00000333090 OR9G4Q8NGQ1 327 aa18.55■□□□□ 0.56
TSKU-201ENST00000333090 CKS2P33552 79 aa18.54■□□□□ 0.56
TSKU-201ENST00000333090 RIPPLY3P57055 190 aa18.54■□□□□ 0.56
TSKU-201ENST00000333090 VSTM5A8MXK1 200 aa18.54■□□□□ 0.56
TSKU-201ENST00000333090 TCF15Q12870 199 aa18.54■□□□□ 0.56
TSKU-201ENST00000333090 IGKV2-40A0A087WW87 121 aaPredicted RBP18.53■□□□□ 0.56
TSKU-201ENST00000333090 NPYP01303 97 aa18.53■□□□□ 0.56
TSKU-201ENST00000333090 IGKV2D-40P01614 121 aaPredicted RBP18.53■□□□□ 0.56
TSKU-201ENST00000333090 ADAMTSL5Q6ZMM2 481 aa18.53■□□□□ 0.56
TSKU-201ENST00000333090 TWIST1Q15672 202 aa18.53■□□□□ 0.56
TSKU-201ENST00000333090 TMEM190Q8WZ59 177 aa18.53■□□□□ 0.56
TSKU-201ENST00000333090 LYNX1G3V0Z9 82 aa18.52■□□□□ 0.56
TSKU-201ENST00000333090 K7EP34 96 aa18.52■□□□□ 0.56
TSKU-201ENST00000333090 LYNX1P0DP58 116 aa18.52■□□□□ 0.56
TSKU-201ENST00000333090 OR2K2Q8NGT1 345 aa18.52■□□□□ 0.56
TSKU-201ENST00000333090 SPTA1P02549 2419 aa18.52■□□□□ 0.56
TSKU-201ENST00000333090 DKK2Q9UBU2 259 aa18.52■□□□□ 0.56
TSKU-201ENST00000333090 GNG7O60262 68 aa18.51■□□□□ 0.55
TSKU-201ENST00000333090 TM4SF20Q53R12 229 aa18.51■□□□□ 0.55
TSKU-201ENST00000333090 PAX8Q06710 450 aa18.51■□□□□ 0.55
TSKU-201ENST00000333090 C18orf15Q96N68 181 aa18.51■□□□□ 0.55
TSKU-201ENST00000333090 TIMM23O14925 209 aa18.51■□□□□ 0.55
TSKU-201ENST00000333090 OR4X2Q8NGF9 303 aa18.51■□□□□ 0.55
TSKU-201ENST00000333090 ASH1LQ9NR48 2969 aaKnown RBP18.5■□□□□ 0.55
TSKU-201ENST00000333090 NDUFS7O75251 213 aa18.5■□□□□ 0.55
TSKU-201ENST00000333090 IGFBPL1Q8WX77 278 aa18.5■□□□□ 0.55
TSKU-201ENST00000333090 WI2-2373I1.2A0A1W2PRP0 233 aa18.5■□□□□ 0.55
TSKU-201ENST00000333090 E7EQL1 145 aa18.5■□□□□ 0.55
TSKU-201ENST00000333090 EGR2P11161 476 aaPredicted RBP18.5■□□□□ 0.55
TSKU-201ENST00000333090 PDE6HQ13956 83 aa18.5■□□□□ 0.55
TSKU-201ENST00000333090 PRR30Q53SZ7 412 aaPredicted RBP18.5■□□□□ 0.55
TSKU-201ENST00000333090 Q8TAT8 98 aa18.5■□□□□ 0.55
TSKU-201ENST00000333090 ABHD17AQ96GS6 310 aa18.5■□□□□ 0.55
TSKU-201ENST00000333090 PPIAL4CA0A0B4J2A2 164 aa18.49■□□□□ 0.55
TSKU-201ENST00000333090 SIVA1O15304 175 aa18.49■□□□□ 0.55
TSKU-201ENST00000333090 PPIAL4GP0DN37 164 aa18.49■□□□□ 0.55
TSKU-201ENST00000333090 COL25A1Q9BXS0 654 aaPredicted RBP18.49■□□□□ 0.55
TSKU-201ENST00000333090 NPIPB5A8MRT5 1133 aa18.48■□□□□ 0.55
TSKU-201ENST00000333090 PRRG2O14669 202 aa18.48■□□□□ 0.55
TSKU-201ENST00000333090 GFRALQ6UXV0 394 aa18.48■□□□□ 0.55
TSKU-201ENST00000333090 SRSF8Q9BRL6 282 aaKnown RBP18.48■□□□□ 0.55
TSKU-201ENST00000333090 PRR25Q96S07 402 aa18.47■□□□□ 0.55
TSKU-201ENST00000333090 SPCS1Q9Y6A9 102 aa18.47■□□□□ 0.55
TSKU-201ENST00000333090 SHISA9B4DS77 424 aa18.47■□□□□ 0.55
TSKU-201ENST00000333090 RNF5Q99942 180 aa18.46■□□□□ 0.55
TSKU-201ENST00000333090 JKAMPQ9P055 326 aa18.46■□□□□ 0.55
TSKU-201ENST00000333090 A0A1W2PPM0 123 aa18.46■□□□□ 0.55
TSKU-201ENST00000333090 ZNF80P51504 273 aaPredicted RBP18.46■□□□□ 0.55
TSKU-201ENST00000333090 IGFL4Q6B9Z1 124 aa18.46■□□□□ 0.55
TSKU-201ENST00000333090 RAB1BQ9H0U4 201 aa18.46■□□□□ 0.55
TSKU-201ENST00000333090 MSRB1Q9NZV6 116 aa18.46■□□□□ 0.55
TSKU-201ENST00000333090 S100A7AQ86SG5 101 aa18.45■□□□□ 0.54
TSKU-201ENST00000333090 ONECUT1Q9UBC0 465 aa18.45■□□□□ 0.54
TSKU-201ENST00000333090 G3V4G9 280 aa18.45■□□□□ 0.54
TSKU-201ENST00000333090 NBR2O15453 112 aa18.44■□□□□ 0.54
TSKU-201ENST00000333090 WNK2Q9Y3S1 2297 aa18.44■□□□□ 0.54
TSKU-201ENST00000333090 LY6LH3BQJ8 138 aa18.44■□□□□ 0.54
TSKU-201ENST00000333090 IGHV3-23P01764 117 aa18.44■□□□□ 0.54
TSKU-201ENST00000333090 VGLL1Q99990 258 aa18.44■□□□□ 0.54
TSKU-201ENST00000333090 TTTY13Q9BZ97 58 aa18.44■□□□□ 0.54
TSKU-201ENST00000333090 GAS8-AS1O95177 125 aa18.43■□□□□ 0.54
TSKU-201ENST00000333090 IGF2-ASQ6U949 168 aa18.43■□□□□ 0.54
TSKU-201ENST00000333090 GCSHP23434 173 aa18.43■□□□□ 0.54
TSKU-201ENST00000333090 MFAP4P55083 255 aa18.43■□□□□ 0.54
TSKU-201ENST00000333090 MAP1LC3AQ9H492 121 aa18.43■□□□□ 0.54
TSKU-201ENST00000333090 ORM1P02763 201 aa18.42■□□□□ 0.54
TSKU-201ENST00000333090 LEPP41159 167 aa18.42■□□□□ 0.54
TSKU-201ENST00000333090 IGF2RP11717 2491 aa18.42■□□□□ 0.54
TSKU-201ENST00000333090 ATRXP46100 2492 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms