RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 ZNF562Q6V9R5 426 aa10.5□□□□□ -0.73
TUBA1B-201ENST00000332858 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 A0A1B0GUT8 65 aa10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 CEACAM3P40198 252 aa10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 HINT1P49773 126 aaPredicted RBP10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 ZFP30Q9Y2G7 519 aa10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 IGKV2-40A0A087WW87 121 aaPredicted RBP10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 H0Y8G0 127 aa10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 M0R1W7 72 aa10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 LEPROTL1O95214 131 aa10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 IGKV2D-40P01614 121 aaPredicted RBP10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 EGR2P11161 476 aaPredicted RBP10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 HLA-DMBP28068 263 aa10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 MFAP4P55083 255 aa10.49□□□□□ -0.73
TUBA1B-201ENST00000332858 hDV102S1A0JD36 115 aa10.48□□□□□ -0.73
TUBA1B-201ENST00000332858 OR4C46A6NHA9 309 aa10.48□□□□□ -0.73
TUBA1B-201ENST00000332858 SYS1-DBNDD2H3BUS1 97 aa10.48□□□□□ -0.73
TUBA1B-201ENST00000332858 PMCHL2Q9BQD1 86 aa10.48□□□□□ -0.73
TUBA1B-201ENST00000332858 C21orf62Q9NYP8 219 aa10.48□□□□□ -0.73
TUBA1B-201ENST00000332858 TRBV6-1A0A0K0K1D8 114 aa10.48□□□□□ -0.73
TUBA1B-201ENST00000332858 NPIPB5A8MRT5 1133 aa10.48□□□□□ -0.73
TUBA1B-201ENST00000332858 FAM106CPP0CH98 169 aa10.48□□□□□ -0.73
TUBA1B-201ENST00000332858 FAM106AQ4KMX7 169 aa10.48□□□□□ -0.73
TUBA1B-201ENST00000332858 COL5A1-AS1Q5SY13 56 aa10.48□□□□□ -0.73
TUBA1B-201ENST00000332858 KLHDC1Q8N7A1 406 aa10.48□□□□□ -0.73
TUBA1B-201ENST00000332858 NEU4Q8WWR8 484 aaPredicted RBP10.48□□□□□ -0.73
TUBA1B-201ENST00000332858 CTSGP08311 255 aa10.47□□□□□ -0.73
TUBA1B-201ENST00000332858 TTC9CQ8N5M4 171 aa10.47□□□□□ -0.73
TUBA1B-201ENST00000332858 CHCHD1Q96BP2 118 aaKnown RBP10.47□□□□□ -0.73
TUBA1B-201ENST00000332858 GOLT1BQ9Y3E0 138 aa10.47□□□□□ -0.73
TUBA1B-201ENST00000332858 SPG11Q96JI7 2443 aa10.47□□□□□ -0.73
TUBA1B-201ENST00000332858 CRXO43186 299 aaPredicted RBP10.47□□□□□ -0.73
TUBA1B-201ENST00000332858 LYPD1Q8N2G4 141 aa10.47□□□□□ -0.73
TUBA1B-201ENST00000332858 Q8N6K4 173 aa10.47□□□□□ -0.73
TUBA1B-201ENST00000332858 Q8TAT8 98 aa10.47□□□□□ -0.73
TUBA1B-201ENST00000332858 SMAD5-AS1Q9Y6J3 95 aa10.47□□□□□ -0.73
TUBA1B-201ENST00000332858 IGHV7-81A0A0B4J1V7 117 aa10.47□□□□□ -0.73
TUBA1B-201ENST00000332858 TMEM213A2RRL7 107 aa10.47□□□□□ -0.73
TUBA1B-201ENST00000332858 CRYBG3Q68DQ2 2970 aa10.46□□□□□ -0.73
TUBA1B-201ENST00000332858 K7EQM0 130 aa10.46□□□□□ -0.73
TUBA1B-201ENST00000332858 IGHG4P01861 327 aa10.46□□□□□ -0.73
TUBA1B-201ENST00000332858 S100A7P31151 101 aa10.46□□□□□ -0.73
TUBA1B-201ENST00000332858 KLRB1Q12918 225 aa10.46□□□□□ -0.73
TUBA1B-201ENST00000332858 LYZL1Q6UWQ5 148 aa10.45□□□□□ -0.74
TUBA1B-201ENST00000332858 VGLL1Q99990 258 aa10.45□□□□□ -0.74
TUBA1B-201ENST00000332858 AAMDCQ9H7C9 122 aa10.45□□□□□ -0.74
TUBA1B-201ENST00000332858 TRAV30A0A087WSZ9 112 aa10.45□□□□□ -0.74
TUBA1B-201ENST00000332858 ZNF80P51504 273 aaPredicted RBP10.45□□□□□ -0.74
TUBA1B-201ENST00000332858 LOXL1Q08397 574 aaPredicted RBP10.45□□□□□ -0.74
TUBA1B-201ENST00000332858 CSMD2Q7Z408 3487 aa10.45□□□□□ -0.74
TUBA1B-201ENST00000332858 LINC01548A6NM66 108 aa10.45□□□□□ -0.74
TUBA1B-201ENST00000332858 PET117Q6UWS5 81 aa10.45□□□□□ -0.74
TUBA1B-201ENST00000332858 ZNF575Q86XF7 245 aa10.45□□□□□ -0.74
TUBA1B-201ENST00000332858 TMEM160Q9NX00 188 aa10.45□□□□□ -0.74
TUBA1B-201ENST00000332858 SH2D1AO60880 128 aa10.44□□□□□ -0.74
TUBA1B-201ENST00000332858 RIGQ13278 110 aa10.44□□□□□ -0.74
TUBA1B-201ENST00000332858 UNQ5815/PRO19632Q6UWF5 114 aa10.44□□□□□ -0.74
TUBA1B-201ENST00000332858 Q8N9W7 124 aa10.44□□□□□ -0.74
TUBA1B-201ENST00000332858 AJUBAQ96IF1 538 aa10.44□□□□□ -0.74
TUBA1B-201ENST00000332858 CFAP46Q8IYW2 2715 aa10.44□□□□□ -0.74
TUBA1B-201ENST00000332858 FXYD7P58549 80 aa10.44□□□□□ -0.74
TUBA1B-201ENST00000332858 PDE6HQ13956 83 aa10.44□□□□□ -0.74
TUBA1B-201ENST00000332858 LOC389332A0A1B0GUA5 103 aa10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 CT45A10P0DMU9 189 aa10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 IFI27P40305 119 aaPredicted RBP10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 AMN1Q8IY45 258 aa10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 MRPS16Q9Y3D3 137 aaKnown RBP10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 IGHV3OR16-13A0A075B7E8 117 aa10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 IGHV3-74A0A0B4J1X5 117 aa10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 IGHV3-66A0A0C4DH42 116 aa10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 NCR2O95944 276 aa10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 EBI3Q14213 229 aa10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 FAM162BQ5T6X4 162 aa10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 ZNF48Q96MX3 618 aaPredicted RBP10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 SIRPDQ9H106 197 aa10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 FLNCQ14315 2725 aa10.43□□□□□ -0.74
TUBA1B-201ENST00000332858 TMEM189A5PLL7 270 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 D6R8Y8 96 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 GPR183P32249 361 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 GAGE1Q13065 139 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 ECSCRQ19T08 205 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 CCDC144NLQ6NUI1 221 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 PRR25Q96S07 402 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 UTP20O75691 2785 aaKnown RBP10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 FOXE3Q13461 319 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 AP5S1Q9NUS5 200 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 PRAC2D3DTV9 90 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 CSN1S1P47710 185 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 C15orf32Q32M92 178 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 DMRTA1Q5VZB9 504 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 DTX2Q86UW9 622 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 ABCA2Q9BZC7 2435 aa10.42□□□□□ -0.74
TUBA1B-201ENST00000332858 A0A096LNJ9 63 aa10.41□□□□□ -0.74
TUBA1B-201ENST00000332858 G3V318 75 aa10.41□□□□□ -0.74
TUBA1B-201ENST00000332858 S100A7AQ86SG5 101 aa10.41□□□□□ -0.74
TUBA1B-201ENST00000332858 GATD1Q8NB37 220 aa10.41□□□□□ -0.74
TUBA1B-201ENST00000332858 MAP1LC3CQ9BXW4 147 aa10.41□□□□□ -0.74
TUBA1B-201ENST00000332858 THYN1Q9P016 225 aa10.41□□□□□ -0.74
TUBA1B-201ENST00000332858 SMKR1H3BMG3 65 aa10.41□□□□□ -0.74
TUBA1B-201ENST00000332858 CLEC3BP05452 202 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms