RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 CXorf1O96002 111 aa19.06■□□□□ 0.64
SMDT1-201ENST00000331479 APOC4P55056 127 aa19.06■□□□□ 0.64
SMDT1-201ENST00000331479 ICAM4Q14773 271 aa19.06■□□□□ 0.64
SMDT1-201ENST00000331479 CLEC5AQ9NY25 188 aa19.06■□□□□ 0.64
SMDT1-201ENST00000331479 KIR2DL5BA0A0G2JN68 375 aa19.05■□□□□ 0.64
SMDT1-201ENST00000331479 KIR2DL5BA0A0G2JPC4 375 aa19.05■□□□□ 0.64
SMDT1-201ENST00000331479 BOLA2-SMG1P6H3BVE0 249 aa19.05■□□□□ 0.64
SMDT1-201ENST00000331479 FGF8P55075 233 aaPredicted RBP19.05■□□□□ 0.64
SMDT1-201ENST00000331479 KIR2DL5AQ8N109 375 aa19.05■□□□□ 0.64
SMDT1-201ENST00000331479 KIR2DL5BQ8NHK3 375 aa19.05■□□□□ 0.64
SMDT1-201ENST00000331479 FAM213BQ8TBF2 198 aa19.05■□□□□ 0.64
SMDT1-201ENST00000331479 CSTL1Q9H114 145 aa19.05■□□□□ 0.64
SMDT1-201ENST00000331479 NBEAL2Q6ZNJ1 2754 aa19.05■□□□□ 0.64
SMDT1-201ENST00000331479 EIF5AL1Q6IS14 154 aaKnown RBP19.04■□□□□ 0.64
SMDT1-201ENST00000331479 OR4B1Q8NGF8 309 aa19.04■□□□□ 0.64
SMDT1-201ENST00000331479 OR8A1Q8NGG7 326 aa19.04■□□□□ 0.64
SMDT1-201ENST00000331479 SUN5Q8TC36 379 aa19.04■□□□□ 0.64
SMDT1-201ENST00000331479 TM2D3Q9BRN9 247 aa19.04■□□□□ 0.64
SMDT1-201ENST00000331479 AAMDCQ9H7C9 122 aa19.04■□□□□ 0.64
SMDT1-201ENST00000331479 Q9H3A6 140 aa19.03■□□□□ 0.64
SMDT1-201ENST00000331479 TMPRSS5Q9H3S3 457 aa19.03■□□□□ 0.64
SMDT1-201ENST00000331479 TGP01266 2768 aa19.02■□□□□ 0.64
SMDT1-201ENST00000331479 MAP1LC3B2A6NCE7 125 aa19.02■□□□□ 0.64
SMDT1-201ENST00000331479 GIG44P09565 113 aaPredicted RBP19.02■□□□□ 0.64
SMDT1-201ENST00000331479 CNN1P51911 297 aaKnown RBP19.02■□□□□ 0.64
SMDT1-201ENST00000331479 IQCF2Q8IXL9 164 aa19.02■□□□□ 0.64
SMDT1-201ENST00000331479 MAP1LC3BQ9GZQ8 125 aa19.02■□□□□ 0.64
SMDT1-201ENST00000331479 HIST1H1AQ02539 215 aaPredicted RBP19.02■□□□□ 0.63
SMDT1-201ENST00000331479 LYPD1Q8N2G4 141 aa19.02■□□□□ 0.63
SMDT1-201ENST00000331479 MRPL53Q96EL3 112 aaKnown RBP19.02■□□□□ 0.63
SMDT1-201ENST00000331479 RETNQ9HD89 108 aa19.02■□□□□ 0.63
SMDT1-201ENST00000331479 PRELID1Q9Y255 219 aa19.02■□□□□ 0.63
SMDT1-201ENST00000331479 DPPA3Q6W0C5 159 aa19.01■□□□□ 0.63
SMDT1-201ENST00000331479 TMEM167BQ9NRX6 74 aa19.01■□□□□ 0.63
SMDT1-201ENST00000331479 A8MTW9 85 aa19■□□□□ 0.63
SMDT1-201ENST00000331479 CA1P00915 261 aaPredicted RBP19■□□□□ 0.63
SMDT1-201ENST00000331479 SULT1A2P50226 295 aa19■□□□□ 0.63
SMDT1-201ENST00000331479 FAM74A1Q5RGS3 127 aa19■□□□□ 0.63
SMDT1-201ENST00000331479 MBD3L1Q8WWY6 194 aa19■□□□□ 0.63
SMDT1-201ENST00000331479 CLUHP3Q96NS8 147 aa19■□□□□ 0.63
SMDT1-201ENST00000331479 UBE2CO00762 179 aa18.99■□□□□ 0.63
SMDT1-201ENST00000331479 DUSP14O95147 198 aaKnown RBP18.99■□□□□ 0.63
SMDT1-201ENST00000331479 NHLRC4P0CG21 123 aaPredicted RBP18.99■□□□□ 0.63
SMDT1-201ENST00000331479 MORN3Q6PF18 240 aaPredicted RBP18.99■□□□□ 0.63
SMDT1-201ENST00000331479 SFT2D1Q8WV19 159 aa18.99■□□□□ 0.63
SMDT1-201ENST00000331479 SLC35B3Q9H1N7 401 aa18.99■□□□□ 0.63
SMDT1-201ENST00000331479 PGPA6NDG6 321 aa18.98■□□□□ 0.63
SMDT1-201ENST00000331479 RAB5CP51148 216 aa18.98■□□□□ 0.63
SMDT1-201ENST00000331479 FXYD7P58549 80 aa18.98■□□□□ 0.63
SMDT1-201ENST00000331479 DEFB135Q30KP9 77 aa18.98■□□□□ 0.63
SMDT1-201ENST00000331479 AMTNQ6UX39 209 aa18.98■□□□□ 0.63
SMDT1-201ENST00000331479 OTORQ9NRC9 128 aa18.98■□□□□ 0.63
SMDT1-201ENST00000331479 SPATA25Q9BR10 227 aa18.98■□□□□ 0.63
SMDT1-201ENST00000331479 A0A1B0GV50 99 aa18.97■□□□□ 0.63
SMDT1-201ENST00000331479 ALKAL2Q6UX46 152 aa18.97■□□□□ 0.63
SMDT1-201ENST00000331479 Q6ZWC4 215 aa18.97■□□□□ 0.63
SMDT1-201ENST00000331479 OR10J6PQ8NGY7 276 aa18.97■□□□□ 0.63
SMDT1-201ENST00000331479 ZMAT4Q9H898 229 aa18.97■□□□□ 0.63
SMDT1-201ENST00000331479 TENM3Q9P273 2699 aa18.96■□□□□ 0.63
SMDT1-201ENST00000331479 H2AFB1P0C5Y9 115 aa18.96■□□□□ 0.63
SMDT1-201ENST00000331479 NUTF2P61970 127 aaKnown RBP18.96■□□□□ 0.63
SMDT1-201ENST00000331479 IGKV2-40A0A087WW87 121 aaPredicted RBP18.95■□□□□ 0.62
SMDT1-201ENST00000331479 IGKV2D-40P01614 121 aaPredicted RBP18.95■□□□□ 0.62
SMDT1-201ENST00000331479 OVOL2Q9BRP0 275 aa18.95■□□□□ 0.62
SMDT1-201ENST00000331479 XCL2Q9UBD3 114 aa18.95■□□□□ 0.62
SMDT1-201ENST00000331479 ERCC8Q13216 396 aa18.94■□□□□ 0.62
SMDT1-201ENST00000331479 YTHDF2Q9Y5A9 579 aaKnown RBP18.94■□□□□ 0.62
SMDT1-201ENST00000331479 GGTLC3B5MD39 225 aa18.93■□□□□ 0.62
SMDT1-201ENST00000331479 NPIPB6E9PJ23 425 aa18.93■□□□□ 0.62
SMDT1-201ENST00000331479 UBE2G2P60604 165 aa18.93■□□□□ 0.62
SMDT1-201ENST00000331479 RNF183Q96D59 192 aa18.93■□□□□ 0.62
SMDT1-201ENST00000331479 CSN1S1P47710 185 aa18.93■□□□□ 0.62
SMDT1-201ENST00000331479 CSNK1G2-AS1Q8NCQ2 148 aa18.93■□□□□ 0.62
SMDT1-201ENST00000331479 RCHY1Q96PM5 261 aa18.93■□□□□ 0.62
SMDT1-201ENST00000331479 VGLL1Q99990 258 aa18.93■□□□□ 0.62
SMDT1-201ENST00000331479 DIRC3C9JPN6 131 aa18.92■□□□□ 0.62
SMDT1-201ENST00000331479 M0R2Z0 102 aa18.92■□□□□ 0.62
SMDT1-201ENST00000331479 CT45A10P0DMU9 189 aa18.92■□□□□ 0.62
SMDT1-201ENST00000331479 SUMO1P63165 101 aaKnown RBP18.92■□□□□ 0.62
SMDT1-201ENST00000331479 GNG5P63218 68 aa18.92■□□□□ 0.62
SMDT1-201ENST00000331479 SPINK13Q1W4C9 94 aa18.92■□□□□ 0.62
SMDT1-201ENST00000331479 CMTM2Q8TAZ6 248 aa18.92■□□□□ 0.62
SMDT1-201ENST00000331479 RXFP4Q8TDU9 374 aa18.92■□□□□ 0.62
SMDT1-201ENST00000331479 AGPAT4-IT1Q9H0P7 198 aa18.92■□□□□ 0.62
SMDT1-201ENST00000331479 RPH3ALQ9UNE2 315 aa18.92■□□□□ 0.62
SMDT1-201ENST00000331479 A0A1W2PRE2 83 aa18.91■□□□□ 0.62
SMDT1-201ENST00000331479 SPRY2O43597 315 aa18.91■□□□□ 0.62
SMDT1-201ENST00000331479 FAM74A7A6NL05 159 aa18.9■□□□□ 0.62
SMDT1-201ENST00000331479 SLC25A5P05141 298 aaKnown RBP18.9■□□□□ 0.62
SMDT1-201ENST00000331479 CCL20P78556 96 aa18.9■□□□□ 0.62
SMDT1-201ENST00000331479 PPP1R14DQ9NXH3 145 aa18.9■□□□□ 0.62
SMDT1-201ENST00000331479 TP53TG1Q9Y2A0 90 aa18.9■□□□□ 0.62
SMDT1-201ENST00000331479 ZNF705EA8MWA4 302 aaPredicted RBP18.89■□□□□ 0.62
SMDT1-201ENST00000331479 C9orf47Q6ZRZ4 202 aa18.89■□□□□ 0.62
SMDT1-201ENST00000331479 C1QTNF4Q9BXJ3 329 aa18.89■□□□□ 0.62
SMDT1-201ENST00000331479 U3KQK5 164 aa18.89■□□□□ 0.61
SMDT1-201ENST00000331479 TRAV1-1A0A0B4J248 108 aa18.88■□□□□ 0.61
SMDT1-201ENST00000331479 CRXO43186 299 aaPredicted RBP18.88■□□□□ 0.61
SMDT1-201ENST00000331479 C5orf17Q8NAS9 161 aa18.88■□□□□ 0.61
SMDT1-201ENST00000331479 LINC00477Q96M19 166 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms