RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 INAFM1C9JVW0 142 aa12.47□□□□□ -0.41
PDGFB-201ENST00000331163 STXBP6Q8NFX7 210 aa12.47□□□□□ -0.41
PDGFB-201ENST00000331163 ZC2HC1AQ96GY0 325 aa12.47□□□□□ -0.41
PDGFB-201ENST00000331163 CHRDL1Q9BU40 450 aa12.47□□□□□ -0.41
PDGFB-201ENST00000331163 SSBP4Q9BWG4 385 aaPredicted RBP12.47□□□□□ -0.41
PDGFB-201ENST00000331163 TMSB15BA0A087X1C1 80 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 CORTO00230 105 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 GOSR1O95249 250 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 CXorf1O96002 111 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 IGLC2P0DOY2 106 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 IGLC3P0DOY3 106 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 GCHFRP30047 84 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 ARL3P36405 182 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 POU2AF1Q16633 256 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 NSUN5P1Q3KNT7 163 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 LINC00479Q96M42 142 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 A0A1W2PS18 150 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 TEX22C9J3V5 150 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 OR4F17Q8NGA8 305 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 OR1L4Q8NGR5 311 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 PRSS22Q9GZN4 317 aa12.46□□□□□ -0.41
PDGFB-201ENST00000331163 ZNF331Q9NQX6 463 aaPredicted RBP12.46□□□□□ -0.41
PDGFB-201ENST00000331163 FAM90A9PA6NNJ1 464 aa12.46□□□□□ -0.42
PDGFB-201ENST00000331163 PRSS47A8MTI9 375 aa12.46□□□□□ -0.42
PDGFB-201ENST00000331163 OOSP1A8MZH6 123 aa12.46□□□□□ -0.42
PDGFB-201ENST00000331163 M0R2Z0 102 aa12.46□□□□□ -0.42
PDGFB-201ENST00000331163 MPDU1O75352 247 aa12.46□□□□□ -0.42
PDGFB-201ENST00000331163 C8orf88P0DMB2 117 aa12.46□□□□□ -0.42
PDGFB-201ENST00000331163 YPEL3P61236 119 aaPredicted RBP12.46□□□□□ -0.42
PDGFB-201ENST00000331163 ARL6IP6Q8N6S5 226 aa12.46□□□□□ -0.42
PDGFB-201ENST00000331163 TCRBV4S1A1TA0A5B7 111 aa12.45□□□□□ -0.42
PDGFB-201ENST00000331163 PMS2P5A8MQ11 134 aa12.45□□□□□ -0.42
PDGFB-201ENST00000331163 KLHDC1Q8N7A1 406 aa12.45□□□□□ -0.42
PDGFB-201ENST00000331163 ZNF418Q8TF45 676 aaPredicted RBP12.45□□□□□ -0.42
PDGFB-201ENST00000331163 RNF125Q96EQ8 232 aa12.45□□□□□ -0.42
PDGFB-201ENST00000331163 CD99P14209 185 aa12.45□□□□□ -0.42
PDGFB-201ENST00000331163 RPL19P84098 196 aaKnown RBP12.45□□□□□ -0.42
PDGFB-201ENST00000331163 PAX2Q02962 417 aa12.45□□□□□ -0.42
PDGFB-201ENST00000331163 EXOC3-AS1Q8N2X6 119 aa12.45□□□□□ -0.42
PDGFB-201ENST00000331163 TRBV12-3P01733 135 aa12.45□□□□□ -0.42
PDGFB-201ENST00000331163 GLMPQ8WWB7 406 aa12.45□□□□□ -0.42
PDGFB-201ENST00000331163 CACNG8Q8WXS5 425 aa12.45□□□□□ -0.42
PDGFB-201ENST00000331163 LOXL1Q08397 574 aaPredicted RBP12.44□□□□□ -0.42
PDGFB-201ENST00000331163 S100A7AQ86SG5 101 aa12.44□□□□□ -0.42
PDGFB-201ENST00000331163 EEF1AKMT3Q96AZ1 226 aa12.44□□□□□ -0.42
PDGFB-201ENST00000331163 SNAI2O43623 268 aa12.44□□□□□ -0.42
PDGFB-201ENST00000331163 ZNF324O75467 553 aaPredicted RBP12.44□□□□□ -0.42
PDGFB-201ENST00000331163 C5orf56Q8N8D9 126 aa12.44□□□□□ -0.42
PDGFB-201ENST00000331163 VWC2LB2RUY7 222 aa12.43□□□□□ -0.42
PDGFB-201ENST00000331163 GATA3P23771 443 aa12.43□□□□□ -0.42
PDGFB-201ENST00000331163 TSPOP30536 169 aa12.43□□□□□ -0.42
PDGFB-201ENST00000331163 C8orf31Q8N9H6 132 aa12.43□□□□□ -0.42
PDGFB-201ENST00000331163 OR4X2Q8NGF9 303 aa12.43□□□□□ -0.42
PDGFB-201ENST00000331163 PSMB11A5LHX3 300 aa12.43□□□□□ -0.42
PDGFB-201ENST00000331163 M0R3E3 92 aa12.43□□□□□ -0.42
PDGFB-201ENST00000331163 APCSP02743 223 aa12.43□□□□□ -0.42
PDGFB-201ENST00000331163 FOXA3P55318 350 aaPredicted RBP12.43□□□□□ -0.42
PDGFB-201ENST00000331163 KCNS1Q96KK3 526 aa12.43□□□□□ -0.42
PDGFB-201ENST00000331163 PMCHL2Q9BQD1 86 aa12.43□□□□□ -0.42
PDGFB-201ENST00000331163 TRAV8-1A0A0A6YYK1 113 aa12.43□□□□□ -0.42
PDGFB-201ENST00000331163 RBX1P62877 108 aa12.43□□□□□ -0.42
PDGFB-201ENST00000331163 SELENOTP62341 195 aa12.42□□□□□ -0.42
PDGFB-201ENST00000331163 MUC21A0A0G2JKD1 596 aa12.42□□□□□ -0.42
PDGFB-201ENST00000331163 MUC21A0A140T8X8 626 aa12.42□□□□□ -0.42
PDGFB-201ENST00000331163 NBEAP1P0C6P0 100 aa12.42□□□□□ -0.42
PDGFB-201ENST00000331163 MUC21Q5SSG8 566 aa12.42□□□□□ -0.42
PDGFB-201ENST00000331163 STAG3L2P0CL84 134 aa12.42□□□□□ -0.42
PDGFB-201ENST00000331163 STAG3L3P0CL85 134 aa12.42□□□□□ -0.42
PDGFB-201ENST00000331163 UBE2V1Q13404 147 aa12.42□□□□□ -0.42
PDGFB-201ENST00000331163 IBA57Q5T440 356 aaKnown RBP12.42□□□□□ -0.42
PDGFB-201ENST00000331163 PRNTQ86SH4 94 aa12.42□□□□□ -0.42
PDGFB-201ENST00000331163 C1orf159Q96HA4 380 aa12.42□□□□□ -0.42
PDGFB-201ENST00000331163 C17orf77Q96MU5 243 aa12.42□□□□□ -0.42
PDGFB-201ENST00000331163 RNF5Q99942 180 aa12.42□□□□□ -0.42
PDGFB-201ENST00000331163 GOLT1AQ6ZVE7 132 aa12.41□□□□□ -0.42
PDGFB-201ENST00000331163 K7EIM0 57 aa12.41□□□□□ -0.42
PDGFB-201ENST00000331163 SYNJ2BPP57105 145 aa12.41□□□□□ -0.42
PDGFB-201ENST00000331163 SAPCD1Q5SSQ6 148 aa12.41□□□□□ -0.42
PDGFB-201ENST00000331163 OR2D3Q8NGH3 330 aa12.41□□□□□ -0.42
PDGFB-201ENST00000331163 TSKUQ8WUA8 353 aa12.41□□□□□ -0.42
PDGFB-201ENST00000331163 BMPR1BO00238 502 aa12.41□□□□□ -0.42
PDGFB-201ENST00000331163 MPV17L2Q567V2 206 aa12.41□□□□□ -0.42
PDGFB-201ENST00000331163 CDC42EP3Q9UKI2 254 aa12.41□□□□□ -0.42
PDGFB-201ENST00000331163 COX11Q9Y6N1 276 aa12.4□□□□□ -0.42
PDGFB-201ENST00000331163 NUDT3O95989 172 aa12.4□□□□□ -0.42
PDGFB-201ENST00000331163 BPIFA4PQ86YQ2 179 aa12.4□□□□□ -0.42
PDGFB-201ENST00000331163 METTL26Q96S19 204 aa12.4□□□□□ -0.42
PDGFB-201ENST00000331163 AAMDCQ9H7C9 122 aa12.4□□□□□ -0.42
PDGFB-201ENST00000331163 VPREB3Q9UKI3 123 aa12.4□□□□□ -0.42
PDGFB-201ENST00000331163 V9GYV3 84 aa12.4□□□□□ -0.42
PDGFB-201ENST00000331163 HLA-DRB1P01911 266 aa12.39□□□□□ -0.43
PDGFB-201ENST00000331163 SLAQ13239 276 aa12.39□□□□□ -0.43
PDGFB-201ENST00000331163 DAZAP1Q96EP5 407 aaKnown RBP12.39□□□□□ -0.43
PDGFB-201ENST00000331163 FANCD2OSQ96PS1 177 aa12.39□□□□□ -0.43
PDGFB-201ENST00000331163 OTOGQ6ZRI0 2925 aa12.39□□□□□ -0.43
PDGFB-201ENST00000331163 hDV102S1A0JD36 115 aa12.39□□□□□ -0.43
PDGFB-201ENST00000331163 IGKV1-17P01599 117 aa12.39□□□□□ -0.43
PDGFB-201ENST00000331163 CSN3P07498 182 aa12.39□□□□□ -0.43
PDGFB-201ENST00000331163 IGLC1P0CG04 106 aa12.39□□□□□ -0.43
PDGFB-201ENST00000331163 CSN1S1P47710 185 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms