RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 OR4X2Q8NGF9 303 aa11.4□□□□□ -0.58
SNX20-202ENST00000330943 IFI27L1Q96BM0 104 aa11.4□□□□□ -0.58
SNX20-202ENST00000330943 CACNA1BQ00975 2339 aa11.4□□□□□ -0.58
SNX20-202ENST00000330943 MALRD1Q5VYJ5 2156 aa11.4□□□□□ -0.58
SNX20-202ENST00000330943 TMEM178BH3BS89 294 aa11.4□□□□□ -0.58
SNX20-202ENST00000330943 RBPJQ06330 500 aa11.4□□□□□ -0.58
SNX20-202ENST00000330943 PPP1R27Q86WC6 154 aa11.4□□□□□ -0.58
SNX20-202ENST00000330943 SHANK2-AS3Q9BTD1 123 aa11.4□□□□□ -0.58
SNX20-202ENST00000330943 FBXL15Q9H469 300 aa11.4□□□□□ -0.58
SNX20-202ENST00000330943 DLX6P56179 175 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 MRPL51Q4U2R6 128 aaKnown RBP11.39□□□□□ -0.59
SNX20-202ENST00000330943 NEGR1Q7Z3B1 354 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 TMEM189A5PLL7 270 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 I3L2K1 104 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 CRYGBP07316 175 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 ADIPOQQ15848 244 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 ABHD17AQ96GS6 310 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 DKK2Q9UBU2 259 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 U3KQK5 164 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 A0A1W2PRD5 423 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 A0A1W2PRF3 423 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 A0A1W2PRM7 423 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 H3BRN7 92 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 SIVA1O15304 175 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 TMEM155Q4W5P6 130 aa11.39□□□□□ -0.59
SNX20-202ENST00000330943 COL25A1Q9BXS0 654 aaPredicted RBP11.39□□□□□ -0.59
SNX20-202ENST00000330943 OR5A1Q8NGJ0 315 aa11.38□□□□□ -0.59
SNX20-202ENST00000330943 C18orf15Q96N68 181 aa11.38□□□□□ -0.59
SNX20-202ENST00000330943 NPFFR1Q9GZQ6 430 aa11.38□□□□□ -0.59
SNX20-202ENST00000330943 NPYP01303 97 aa11.38□□□□□ -0.59
SNX20-202ENST00000330943 CKS2P33552 79 aa11.38□□□□□ -0.59
SNX20-202ENST00000330943 PLGLAQ15195 96 aa11.38□□□□□ -0.59
SNX20-202ENST00000330943 PRSS33Q8NF86 280 aa11.38□□□□□ -0.59
SNX20-202ENST00000330943 NUP37Q8NFH4 326 aa11.38□□□□□ -0.59
SNX20-202ENST00000330943 SH2D1AO60880 128 aa11.37□□□□□ -0.59
SNX20-202ENST00000330943 IL4P05112 153 aa11.37□□□□□ -0.59
SNX20-202ENST00000330943 FABP2P12104 132 aa11.37□□□□□ -0.59
SNX20-202ENST00000330943 TMEM108Q6UXF1 575 aa11.37□□□□□ -0.59
SNX20-202ENST00000330943 NDUFS7O75251 213 aa11.37□□□□□ -0.59
SNX20-202ENST00000330943 FCGR2BP31994 310 aaPredicted RBP11.37□□□□□ -0.59
SNX20-202ENST00000330943 C1orf185Q5T7R7 199 aa11.37□□□□□ -0.59
SNX20-202ENST00000330943 PIP4P1Q86T03 277 aa11.37□□□□□ -0.59
SNX20-202ENST00000330943 RALYQ9UKM9 306 aaKnown RBP11.37□□□□□ -0.59
SNX20-202ENST00000330943 TMEM11P17152 192 aa11.36□□□□□ -0.59
SNX20-202ENST00000330943 GCSHP23434 173 aa11.36□□□□□ -0.59
SNX20-202ENST00000330943 PAX8Q06710 450 aa11.36□□□□□ -0.59
SNX20-202ENST00000330943 LYPD1Q8N2G4 141 aa11.36□□□□□ -0.59
SNX20-202ENST00000330943 RNF125Q96EQ8 232 aa11.36□□□□□ -0.59
SNX20-202ENST00000330943 S4R3C0 116 aa11.36□□□□□ -0.59
SNX20-202ENST00000330943 IGHV1-3A0A0C4DH29 117 aa11.36□□□□□ -0.59
SNX20-202ENST00000330943 SAMD5Q5TGI4 173 aa11.36□□□□□ -0.59
SNX20-202ENST00000330943 RPL24P83731 157 aaKnown RBP11.36□□□□□ -0.59
SNX20-202ENST00000330943 TWIST1Q15672 202 aa11.36□□□□□ -0.59
SNX20-202ENST00000330943 ZNF491Q8N8L2 437 aa11.36□□□□□ -0.59
SNX20-202ENST00000330943 TTTY13Q9BZ97 58 aa11.36□□□□□ -0.59
SNX20-202ENST00000330943 ANKHD1Q8IWZ3 2542 aaKnown RBP11.35□□□□□ -0.59
SNX20-202ENST00000330943 BCL6BQ8N143 479 aaPredicted RBP11.35□□□□□ -0.59
SNX20-202ENST00000330943 AAMDCQ9H7C9 122 aa11.35□□□□□ -0.59
SNX20-202ENST00000330943 WNK2Q9Y3S1 2297 aa11.35□□□□□ -0.59
SNX20-202ENST00000330943 CELSR1Q9NYQ6 3014 aa11.35□□□□□ -0.59
SNX20-202ENST00000330943 K7EIM0 57 aa11.35□□□□□ -0.59
SNX20-202ENST00000330943 CNIH1O95406 144 aa11.35□□□□□ -0.59
SNX20-202ENST00000330943 SMIM13P0DJ93 91 aa11.35□□□□□ -0.59
SNX20-202ENST00000330943 CLEC2AQ6UVW9 174 aa11.35□□□□□ -0.59
SNX20-202ENST00000330943 IGKV2-40A0A087WW87 121 aaPredicted RBP11.34□□□□□ -0.59
SNX20-202ENST00000330943 TNFRSF13BO14836 293 aaPredicted RBP11.34□□□□□ -0.59
SNX20-202ENST00000330943 MRPS12O15235 138 aaKnown RBP11.34□□□□□ -0.59
SNX20-202ENST00000330943 IGKV2D-40P01614 121 aaPredicted RBP11.34□□□□□ -0.59
SNX20-202ENST00000330943 FXYD2P54710 66 aa11.34□□□□□ -0.59
SNX20-202ENST00000330943 TCF15Q12870 199 aa11.34□□□□□ -0.59
SNX20-202ENST00000330943 ASCL5Q7RTU5 278 aa11.34□□□□□ -0.59
SNX20-202ENST00000330943 IGKV2D-26A0A0A0MRZ7 120 aa11.34□□□□□ -0.59
SNX20-202ENST00000330943 SPG11Q96JI7 2443 aa11.34□□□□□ -0.59
SNX20-202ENST00000330943 K7ERJ3 54 aa11.33□□□□□ -0.6
SNX20-202ENST00000330943 BSPH1Q075Z2 132 aa11.33□□□□□ -0.6
SNX20-202ENST00000330943 WI2-2373I1.2A0A1W2PRP0 233 aa11.33□□□□□ -0.6
SNX20-202ENST00000330943 PRSS47A8MTI9 375 aa11.33□□□□□ -0.6
SNX20-202ENST00000330943 COX7A1P24310 79 aa11.33□□□□□ -0.6
SNX20-202ENST00000330943 TEX48A0A1B0GUV7 120 aa11.32□□□□□ -0.6
SNX20-202ENST00000330943 EGR2P11161 476 aaPredicted RBP11.32□□□□□ -0.6
SNX20-202ENST00000330943 IGLV1-47P01700 117 aa11.32□□□□□ -0.6
SNX20-202ENST00000330943 KLF17Q5JT82 389 aaPredicted RBP11.32□□□□□ -0.6
SNX20-202ENST00000330943 Q8TAT8 98 aa11.32□□□□□ -0.6
SNX20-202ENST00000330943 TMEM190Q8WZ59 177 aa11.32□□□□□ -0.6
SNX20-202ENST00000330943 CENPEQ02224 2701 aa11.32□□□□□ -0.6
SNX20-202ENST00000330943 FBLL1A6NHQ2 334 aaKnown RBP11.32□□□□□ -0.6
SNX20-202ENST00000330943 BUB1B-PAK6H3BSN5 160 aa11.32□□□□□ -0.6
SNX20-202ENST00000330943 SMIM17P0DL12 118 aa11.32□□□□□ -0.6
SNX20-202ENST00000330943 RPEQ96AT9 228 aa11.32□□□□□ -0.6
SNX20-202ENST00000330943 VPS13CQ709C8 3753 aa11.31□□□□□ -0.6
SNX20-202ENST00000330943 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
SNX20-202ENST00000330943 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
SNX20-202ENST00000330943 NPIPB5A8MRT5 1133 aa11.31□□□□□ -0.6
SNX20-202ENST00000330943 GNG7O60262 68 aa11.31□□□□□ -0.6
SNX20-202ENST00000330943 GAS8-AS1O95177 125 aa11.31□□□□□ -0.6
SNX20-202ENST00000330943 GOSR1O95249 250 aa11.31□□□□□ -0.6
SNX20-202ENST00000330943 LEPP41159 167 aa11.31□□□□□ -0.6
SNX20-202ENST00000330943 TNFRSF14Q92956 283 aa11.31□□□□□ -0.6
SNX20-202ENST00000330943 MAP1LC3AQ9H492 121 aa11.31□□□□□ -0.6
SNX20-202ENST00000330943 PPIAL4CA0A0B4J2A2 164 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms