RNA–Protein interactions for RNA: ENST00000330843.8

RAB11FIP1-202, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene RAB11FIP1, Length 7,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-202ENST00000330843 HLA-DMBP28068 263 aa10.43□□□□□ -0.74
RAB11FIP1-202ENST00000330843 ZNF329Q86UD4 541 aa10.43□□□□□ -0.74
RAB11FIP1-202ENST00000330843 PAPPA2Q9BXP8 1791 aa10.43□□□□□ -0.74
RAB11FIP1-202ENST00000330843 NEGR1Q7Z3B1 354 aa10.43□□□□□ -0.74
RAB11FIP1-202ENST00000330843 WDR83OSQ9Y284 106 aa10.43□□□□□ -0.74
RAB11FIP1-202ENST00000330843 LCTP09848 1927 aa10.43□□□□□ -0.74
RAB11FIP1-202ENST00000330843 SCRT2Q9NQ03 307 aa10.43□□□□□ -0.74
RAB11FIP1-202ENST00000330843 SPTBN2O15020 2390 aa10.43□□□□□ -0.74
RAB11FIP1-202ENST00000330843 IGHV1-24A0A0C4DH33 117 aa10.43□□□□□ -0.74
RAB11FIP1-202ENST00000330843 PSMB8P28062 276 aa10.43□□□□□ -0.74
RAB11FIP1-202ENST00000330843 SRSF7Q16629 238 aaKnown RBP eCLIP10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 LIME1Q9H400 295 aa10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 CDPF1Q6NVV7 123 aa10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 SIPA1L3O60292 1781 aaPredicted RBP10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 MED12LQ86YW9 2145 aa10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 DKK1O94907 266 aa10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 NXPH4O95158 308 aa10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 C12orf74Q32Q52 190 aa10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 LY6G5BQ8NDX9 201 aa10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 WBP1Q96G27 269 aa10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 MARF1Q9Y4F3 1742 aaKnown RBP10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 PRR14LQ5THK1 2151 aa10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 CHCHD2Q9Y6H1 151 aaPredicted RBP10.42□□□□□ -0.74
RAB11FIP1-202ENST00000330843 HLA-DRB4P13762 266 aa10.41□□□□□ -0.74
RAB11FIP1-202ENST00000330843 HLA-DRB4X5D2U9 266 aa10.41□□□□□ -0.74
RAB11FIP1-202ENST00000330843 MLANAQ16655 118 aa10.41□□□□□ -0.74
RAB11FIP1-202ENST00000330843 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.41□□□□□ -0.742e-12■□□□□ 8.6
RAB11FIP1-202ENST00000330843 BAALC-AS2P0C853 105 aa10.41□□□□□ -0.74
RAB11FIP1-202ENST00000330843 NEU4Q8WWR8 484 aaPredicted RBP10.41□□□□□ -0.74
RAB11FIP1-202ENST00000330843 UBR3Q6ZT12 1888 aa10.41□□□□□ -0.74
RAB11FIP1-202ENST00000330843 MED13LQ71F56 2210 aa10.41□□□□□ -0.74
RAB11FIP1-202ENST00000330843 C17orf100A8MU93 164 aa10.41□□□□□ -0.74
RAB11FIP1-202ENST00000330843 C9JQL5 133 aa10.41□□□□□ -0.74
RAB11FIP1-202ENST00000330843 RNASE13Q5GAN3 156 aaKnown RBP10.41□□□□□ -0.74
RAB11FIP1-202ENST00000330843 THAP8Q8NA92 274 aa10.41□□□□□ -0.74
RAB11FIP1-202ENST00000330843 PLXNB1O43157 2135 aa10.41□□□□□ -0.74
RAB11FIP1-202ENST00000330843 ACYP1P07311 99 aa10.4□□□□□ -0.74
RAB11FIP1-202ENST00000330843 CYYR1Q96J86 154 aa10.4□□□□□ -0.74
RAB11FIP1-202ENST00000330843 COL6A6A6NMZ7 2263 aa10.4□□□□□ -0.74
RAB11FIP1-202ENST00000330843 Q0VG73 95 aa10.4□□□□□ -0.74
RAB11FIP1-202ENST00000330843 KLF5Q13887 457 aaPredicted RBP10.4□□□□□ -0.74
RAB11FIP1-202ENST00000330843 C18orf32Q8TCD1 76 aa10.4□□□□□ -0.74
RAB11FIP1-202ENST00000330843 FRMPD3Q5JV73 1810 aa10.4□□□□□ -0.74
RAB11FIP1-202ENST00000330843 TRAV1-1A0A0B4J248 108 aa10.4□□□□□ -0.74
RAB11FIP1-202ENST00000330843 C8orf86Q6ZUL3 223 aa10.4□□□□□ -0.74
RAB11FIP1-202ENST00000330843 RNF183Q96D59 192 aa10.4□□□□□ -0.74
RAB11FIP1-202ENST00000330843 LINC00271P0C7V0 271 aa10.4□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IGHV2-70DA0A0C4DH43 119 aa10.4□□□□□ -0.75
RAB11FIP1-202ENST00000330843 G3V4G9 280 aa10.39□□□□□ -0.75
RAB11FIP1-202ENST00000330843 STPG1Q5TH74 334 aa10.39□□□□□ -0.75
RAB11FIP1-202ENST00000330843 TET1Q8NFU7 2136 aa10.39□□□□□ -0.75
RAB11FIP1-202ENST00000330843 M0R1W7 72 aa10.39□□□□□ -0.75
RAB11FIP1-202ENST00000330843 KLF2Q9Y5W3 355 aaPredicted RBP10.39□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IGHV3-38A0A0C4DH36 116 aa10.39□□□□□ -0.75
RAB11FIP1-202ENST00000330843 MSRB2Q9Y3D2 182 aa10.39□□□□□ -0.75
RAB11FIP1-202ENST00000330843 OBSL1O75147 1896 aa10.39□□□□□ -0.75
RAB11FIP1-202ENST00000330843 RLFQ13129 1914 aa10.39□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IGHV1OR15-1A0A075B7D0 117 aa10.38□□□□□ -0.75
RAB11FIP1-202ENST00000330843 PLCE1Q9P212 2302 aa10.38□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IGHV4-28A0A0C4DH34 117 aa10.38□□□□□ -0.75
RAB11FIP1-202ENST00000330843 TAL2Q16559 108 aa10.38□□□□□ -0.75
RAB11FIP1-202ENST00000330843 C1orf195Q5TG92 126 aa10.38□□□□□ -0.75
RAB11FIP1-202ENST00000330843 CLPSL2Q6UWE3 100 aa10.38□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IL17RELQ6ZVW7 336 aa10.38□□□□□ -0.75
RAB11FIP1-202ENST00000330843 ZDBF2Q9HCK1 2354 aa10.38□□□□□ -0.75
RAB11FIP1-202ENST00000330843 WFDC11Q8NEX6 87 aa10.38□□□□□ -0.75
RAB11FIP1-202ENST00000330843 PRSS22Q9GZN4 317 aa10.38□□□□□ -0.75
RAB11FIP1-202ENST00000330843 A0A0B4J2C4 111 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 DEFB130BP0DP73 79 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 DEFB130AP0DP74 79 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 NKAPP1Q8N9T2 125 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IGHV4-4A0A075B6R2 117 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 J3QRE1 110 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 TRGV9Q99603 122 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 PNRC2Q9NPJ4 139 aaKnown RBP10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 ZC2HC1AQ96GY0 325 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 MLST8Q9BVC4 326 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IGLC7A0M8Q6 106 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 K7EMI3 77 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 VWC2Q2TAL6 325 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 IGKV1-5P01602 117 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 WFDC2Q14508 124 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 TMEM200BQ69YZ2 307 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 WIPF2Q8TF74 440 aaPredicted RBP10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 ORMDL1Q9P0S3 153 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 THBDP07204 575 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 VMO1Q7Z5L0 202 aa10.37□□□□□ -0.75
RAB11FIP1-202ENST00000330843 FAM240AA0A1B0GVK7 77 aa10.36□□□□□ -0.75
RAB11FIP1-202ENST00000330843 NPYP01303 97 aa10.36□□□□□ -0.75
RAB11FIP1-202ENST00000330843 LYPD6Q86Y78 171 aa10.36□□□□□ -0.75
RAB11FIP1-202ENST00000330843 ZNF561-AS1K7EIQ3 104 aa10.36□□□□□ -0.75
RAB11FIP1-202ENST00000330843 DTX1Q86Y01 620 aa10.36□□□□□ -0.75
RAB11FIP1-202ENST00000330843 SIVA1O15304 175 aa10.36□□□□□ -0.75
RAB11FIP1-202ENST00000330843 RETNQ9HD89 108 aa10.36□□□□□ -0.75
RAB11FIP1-202ENST00000330843 MDS2Q8NDY4 140 aa10.36□□□□□ -0.75
RAB11FIP1-202ENST00000330843 C22orf46C9J442 243 aa10.36□□□□□ -0.75
RAB11FIP1-202ENST00000330843 ITGBL1O95965 494 aaPredicted RBP10.36□□□□□ -0.75
RAB11FIP1-202ENST00000330843 MRPL51Q4U2R6 128 aaKnown RBP10.36□□□□□ -0.75
RAB11FIP1-202ENST00000330843 C9orf106Q8NAJ2 232 aa10.36□□□□□ -0.75
RAB11FIP1-202ENST00000330843 ZNF581Q9P0T4 197 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms