RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 HLA-DRB4X5D2U9 266 aa10.43□□□□□ -0.74
CMTM1-201ENST00000328020 AGRNO00468 2067 aa10.42□□□□□ -0.74
CMTM1-201ENST00000328020 KNCNA6PVL3 124 aa10.42□□□□□ -0.74
CMTM1-201ENST00000328020 ZNF705EA8MWA4 302 aaPredicted RBP10.42□□□□□ -0.74
CMTM1-201ENST00000328020 UBE2CO00762 179 aa10.42□□□□□ -0.74
CMTM1-201ENST00000328020 EIF3GO75821 320 aaKnown RBP eCLIP10.42□□□□□ -0.74
CMTM1-201ENST00000328020 ICAM4Q14773 271 aa10.42□□□□□ -0.74
CMTM1-201ENST00000328020 MORN3Q6PF18 240 aaPredicted RBP10.42□□□□□ -0.74
CMTM1-201ENST00000328020 ALKAL2Q6UX46 152 aa10.42□□□□□ -0.74
CMTM1-201ENST00000328020 ARL6IP6Q8N6S5 226 aa10.42□□□□□ -0.74
CMTM1-201ENST00000328020 SUN5Q8TC36 379 aa10.42□□□□□ -0.74
CMTM1-201ENST00000328020 CLUHP3Q96NS8 147 aa10.42□□□□□ -0.74
CMTM1-201ENST00000328020 Q9H3A6 140 aa10.42□□□□□ -0.74
CMTM1-201ENST00000328020 PPP1R14DQ9NXH3 145 aa10.42□□□□□ -0.74
CMTM1-201ENST00000328020 A0A0J9YX75 114 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 A0A1W2PRE2 83 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 H3BMM0 161 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 RPL35AP18077 110 aaKnown RBP10.41□□□□□ -0.74
CMTM1-201ENST00000328020 FGF8P55075 233 aaPredicted RBP10.41□□□□□ -0.74
CMTM1-201ENST00000328020 BLOC1S1P78537 153 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 ZNF124Q15973 351 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 SSX7Q7RTT5 188 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 EXOC3-AS1Q8N2X6 119 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 OR4B1Q8NGF8 309 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 OR8A1Q8NGG7 326 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 CITED4Q96RK1 184 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 B9D2Q9BPU9 175 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 CSTL1Q9H114 145 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 PLA2G2EQ9NZK7 142 aa10.41□□□□□ -0.74
CMTM1-201ENST00000328020 TRAV1-1A0A0B4J248 108 aa10.4□□□□□ -0.74
CMTM1-201ENST00000328020 RBMY1BA6NDE4 496 aaKnown RBP10.4□□□□□ -0.74
CMTM1-201ENST00000328020 PGPA6NDG6 321 aa10.4□□□□□ -0.74
CMTM1-201ENST00000328020 RBMY1EA6NEQ0 496 aaKnown RBP10.4□□□□□ -0.74
CMTM1-201ENST00000328020 IFNA7P01567 189 aa10.4□□□□□ -0.74
CMTM1-201ENST00000328020 RBMY1DP0C7P1 496 aaKnown RBP10.4□□□□□ -0.74
CMTM1-201ENST00000328020 HLA-DMBP28068 263 aa10.4□□□□□ -0.74
CMTM1-201ENST00000328020 HIST1H1AQ02539 215 aaPredicted RBP10.4□□□□□ -0.74
CMTM1-201ENST00000328020 TRPT1Q86TN4 253 aaKnown RBP10.4□□□□□ -0.74
CMTM1-201ENST00000328020 C1QTNF4Q9BXJ3 329 aa10.4□□□□□ -0.74
CMTM1-201ENST00000328020 ARL2-SNX15V9GYD0 113 aa10.4□□□□□ -0.74
CMTM1-201ENST00000328020 SERTM2A0A1B0GWG4 89 aa10.39□□□□□ -0.75
CMTM1-201ENST00000328020 ZNF705FA8MVS1 300 aaPredicted RBP10.39□□□□□ -0.75
CMTM1-201ENST00000328020 K7EQM0 130 aa10.39□□□□□ -0.75
CMTM1-201ENST00000328020 IFNA1P01562 189 aa10.39□□□□□ -0.75
CMTM1-201ENST00000328020 NHLRC4P0CG21 123 aaPredicted RBP10.39□□□□□ -0.75
CMTM1-201ENST00000328020 LINC00322Q6ZN03 302 aaPredicted RBP10.39□□□□□ -0.75
CMTM1-201ENST00000328020 F6UB75 175 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 M0R3E3 92 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 AMBPP02760 352 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 SLC25A5P05141 298 aaKnown RBP10.38□□□□□ -0.75
CMTM1-201ENST00000328020 TSPOP30536 169 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 CNN1P51911 297 aaKnown RBP10.38□□□□□ -0.75
CMTM1-201ENST00000328020 HAGHQ16775 308 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 TMEM78Q5T7P6 136 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 GDF5OSQ5U4N7 250 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 C5orf17Q8NAS9 161 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 TCEAL7Q9BRU2 100 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 TMPRSS5Q9H3S3 457 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 ZMAT4Q9H898 229 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 MANBALQ9NQG1 85 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 NBEAL2Q6ZNJ1 2754 aa10.38□□□□□ -0.75
CMTM1-201ENST00000328020 A0A1B0GV50 99 aa10.37□□□□□ -0.75
CMTM1-201ENST00000328020 RBAKDNA6NC62 111 aa10.37□□□□□ -0.75
CMTM1-201ENST00000328020 F6UZH7 168 aa10.37□□□□□ -0.75
CMTM1-201ENST00000328020 CA1P00915 261 aaPredicted RBP10.37□□□□□ -0.75
CMTM1-201ENST00000328020 IGKV3-20P01619 116 aa10.37□□□□□ -0.75
CMTM1-201ENST00000328020 TAGLN2P37802 199 aaKnown RBP10.37□□□□□ -0.75
CMTM1-201ENST00000328020 UBE2G2P60604 165 aa10.37□□□□□ -0.75
CMTM1-201ENST00000328020 SUMO1P63165 101 aaKnown RBP10.37□□□□□ -0.75
CMTM1-201ENST00000328020 CST9LP1Q5W188 147 aa10.37□□□□□ -0.75
CMTM1-201ENST00000328020 TEX261Q6UWH6 196 aa10.37□□□□□ -0.75
CMTM1-201ENST00000328020 Q6ZWC4 215 aa10.37□□□□□ -0.75
CMTM1-201ENST00000328020 LINC00477Q96M19 166 aa10.37□□□□□ -0.75
CMTM1-201ENST00000328020 SPATA25Q9BR10 227 aa10.37□□□□□ -0.75
CMTM1-201ENST00000328020 FBLL1A6NHQ2 334 aaKnown RBP10.36□□□□□ -0.75
CMTM1-201ENST00000328020 FAM74A7A6NL05 159 aa10.36□□□□□ -0.75
CMTM1-201ENST00000328020 DIRC3C9JPN6 131 aa10.36□□□□□ -0.75
CMTM1-201ENST00000328020 NPIPB6E9PJ23 425 aa10.36□□□□□ -0.75
CMTM1-201ENST00000328020 DEFB1P60022 68 aa10.36□□□□□ -0.75
CMTM1-201ENST00000328020 ODF3Q96PU9 254 aa10.36□□□□□ -0.75
CMTM1-201ENST00000328020 TXNDC17Q9BRA2 123 aa10.36□□□□□ -0.75
CMTM1-201ENST00000328020 A8MTW9 85 aa10.35□□□□□ -0.75
CMTM1-201ENST00000328020 PRAC2D3DTV9 90 aa10.35□□□□□ -0.75
CMTM1-201ENST00000328020 ZNF705DP0CH99 300 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-201ENST00000328020 ZNF705BP0CI00 300 aaPredicted RBP10.35□□□□□ -0.75
CMTM1-201ENST00000328020 LEPP41159 167 aa10.35□□□□□ -0.75
CMTM1-201ENST00000328020 C9orf47Q6ZRZ4 202 aa10.35□□□□□ -0.75
CMTM1-201ENST00000328020 SBSPONQ8IVN8 264 aa10.35□□□□□ -0.75
CMTM1-201ENST00000328020 ZNF680Q8NEM1 530 aa10.35□□□□□ -0.75
CMTM1-201ENST00000328020 HIST1H2BAQ96A08 127 aa10.35□□□□□ -0.75
CMTM1-201ENST00000328020 ASCL2Q99929 193 aa10.35□□□□□ -0.75
CMTM1-201ENST00000328020 GNG13Q9P2W3 67 aa10.35□□□□□ -0.75
CMTM1-201ENST00000328020 EPDR1Q9UM22 224 aa10.35□□□□□ -0.75
CMTM1-201ENST00000328020 RPH3ALQ9UNE2 315 aa10.35□□□□□ -0.75
CMTM1-201ENST00000328020 GGTLC3B5MD39 225 aa10.34□□□□□ -0.75
CMTM1-201ENST00000328020 PAGE4O60829 102 aa10.34□□□□□ -0.75
CMTM1-201ENST00000328020 PMS2P11Q13670 270 aa10.34□□□□□ -0.75
CMTM1-201ENST00000328020 GOLT1AQ6ZVE7 132 aa10.34□□□□□ -0.75
CMTM1-201ENST00000328020 RCHY1Q96PM5 261 aa10.34□□□□□ -0.75
CMTM1-201ENST00000328020 ATG101Q9BSB4 218 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms