RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 COL4A1P02462 1669 aa13.27□□□□□ -0.29
SMAD3-201ENST00000327367 SIGLEC9Q9Y336 463 aa13.27□□□□□ -0.29
SMAD3-201ENST00000327367 UCNP55089 124 aa13.27□□□□□ -0.29
SMAD3-201ENST00000327367 SHANK2-AS3Q9BTD1 123 aa13.27□□□□□ -0.29
SMAD3-201ENST00000327367 NBL1P41271 181 aa13.26□□□□□ -0.29
SMAD3-201ENST00000327367 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-201ENST00000327367 NDUFS5O43920 106 aa13.26□□□□□ -0.29
SMAD3-201ENST00000327367 PAX9P55771 341 aa13.26□□□□□ -0.29
SMAD3-201ENST00000327367 CT83Q5H943 113 aa13.26□□□□□ -0.29
SMAD3-201ENST00000327367 SP7Q8TDD2 431 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-201ENST00000327367 ZNF492Q9P255 531 aa13.26□□□□□ -0.29
SMAD3-201ENST00000327367 FREM3P0C091 2139 aa13.26□□□□□ -0.29
SMAD3-201ENST00000327367 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
SMAD3-201ENST00000327367 YPEL3P61236 119 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-201ENST00000327367 DAD1P61803 113 aa13.26□□□□□ -0.29
SMAD3-201ENST00000327367 PSCAO43653 123 aa13.26□□□□□ -0.29
SMAD3-201ENST00000327367 LYPD1Q8N2G4 141 aa13.26□□□□□ -0.29
SMAD3-201ENST00000327367 RHPN1-AS1Q9BWJ2 59 aa13.26□□□□□ -0.29
SMAD3-201ENST00000327367 HLA-DMBP28068 263 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 NYNRINQ9P2P1 1898 aaKnown RBP13.25□□□□□ -0.29
SMAD3-201ENST00000327367 TRAV12-2A0A075B6T6 113 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 SRRM5B3KS81 715 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 I3L3M4 83 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 SPINK13Q1W4C9 94 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 SSC4DQ8WTU2 575 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 M0R1W7 72 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 GAFA1Q96PS6 74 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 K7EN84 100 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 CLPSL2Q6UWE3 100 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 DEFB105AQ8NG35 78 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 CRYGCP07315 174 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 SPACA3Q8IXA5 215 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 FLVCR1-AS1Q8TAF5 88 aa13.25□□□□□ -0.29
SMAD3-201ENST00000327367 TRBV7-1A0A0A6YYK4 115 aa13.24□□□□□ -0.29
SMAD3-201ENST00000327367 WIPF2Q8TF74 440 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-201ENST00000327367 FNDC10F2Z333 226 aa13.24□□□□□ -0.29
SMAD3-201ENST00000327367 BUB1B-PAK6H3BSN5 160 aa13.24□□□□□ -0.29
SMAD3-201ENST00000327367 LYPD2Q6UXB3 125 aa13.24□□□□□ -0.29
SMAD3-201ENST00000327367 BAALC-AS2P0C853 105 aa13.24□□□□□ -0.29
SMAD3-201ENST00000327367 AHDC1Q5TGY3 1603 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-201ENST00000327367 IGKV1-6A0A0C4DH72 117 aa13.24□□□□□ -0.29
SMAD3-201ENST00000327367 SDHAF1A6NFY7 115 aa13.24□□□□□ -0.29
SMAD3-201ENST00000327367 IGKV1D-17A0A075B6S4 117 aa13.23□□□□□ -0.29
SMAD3-201ENST00000327367 A0A1W2PPI3 338 aa13.23□□□□□ -0.29
SMAD3-201ENST00000327367 C5orf64Q2M2E5 130 aa13.23□□□□□ -0.29
SMAD3-201ENST00000327367 GGNQ86UU5 652 aa13.23□□□□□ -0.29
SMAD3-201ENST00000327367 IGHV4-4A0A075B6R2 117 aa13.23□□□□□ -0.29
SMAD3-201ENST00000327367 J3QQQ9 107 aa13.23□□□□□ -0.29
SMAD3-201ENST00000327367 NUPR1O60356 82 aa13.23□□□□□ -0.29
SMAD3-201ENST00000327367 FAM236AA0A1B0GUQ0 79 aa13.23□□□□□ -0.29
SMAD3-201ENST00000327367 FAM236BA0A1B0GV22 79 aa13.23□□□□□ -0.29
SMAD3-201ENST00000327367 SP9P0CG40 484 aa13.23□□□□□ -0.29
SMAD3-201ENST00000327367 MRPL14Q6P1L8 145 aaKnown RBP13.23□□□□□ -0.29
SMAD3-201ENST00000327367 SHANK3Q9BYB0 1731 aa13.22□□□□□ -0.29
SMAD3-201ENST00000327367 TRAV26-1A0A087WT03 109 aa13.22□□□□□ -0.29
SMAD3-201ENST00000327367 RTTNQ86VV8 2226 aa13.22□□□□□ -0.29
SMAD3-201ENST00000327367 IGHV2-70DA0A0C4DH43 119 aa13.22□□□□□ -0.29
SMAD3-201ENST00000327367 SPRY2O43597 315 aa13.22□□□□□ -0.29
SMAD3-201ENST00000327367 WFDC2Q14508 124 aa13.22□□□□□ -0.29
SMAD3-201ENST00000327367 ZNF672Q499Z4 452 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-201ENST00000327367 IGHG2P01859 326 aa13.21□□□□□ -0.29
SMAD3-201ENST00000327367 LINC00173Q6ZV60 143 aa13.21□□□□□ -0.29
SMAD3-201ENST00000327367 BRK1Q8WUW1 75 aa13.21□□□□□ -0.29
SMAD3-201ENST00000327367 RNASE6Q93091 150 aaKnown RBP13.21□□□□□ -0.29
SMAD3-201ENST00000327367 XCL2Q9UBD3 114 aa13.21□□□□□ -0.29
SMAD3-201ENST00000327367 MRPS18CQ9Y3D5 142 aaKnown RBP13.21□□□□□ -0.29
SMAD3-201ENST00000327367 GLI3P10071 1580 aa13.21□□□□□ -0.29
SMAD3-201ENST00000327367 A0A096LPF7 62 aa13.21□□□□□ -0.29
SMAD3-201ENST00000327367 IGHV4-28A0A0C4DH34 117 aa13.21□□□□□ -0.29
SMAD3-201ENST00000327367 A0A1B0GX51 115 aa13.21□□□□□ -0.29
SMAD3-201ENST00000327367 TMEM178BH3BS89 294 aa13.21□□□□□ -0.29
SMAD3-201ENST00000327367 OVOL3O00110 214 aa13.21□□□□□ -0.29
SMAD3-201ENST00000327367 NDUFC2O95298 119 aa13.21□□□□□ -0.29
SMAD3-201ENST00000327367 PIP4P2Q8N4L2 257 aa13.21□□□□□ -0.29
SMAD3-201ENST00000327367 DEFB125Q8N687 156 aa13.21□□□□□ -0.3
SMAD3-201ENST00000327367 WFDC9Q8NEX5 89 aa13.21□□□□□ -0.3
SMAD3-201ENST00000327367 ADAMTSL3P82987 1691 aa13.21□□□□□ -0.3
SMAD3-201ENST00000327367 H3BUX3 64 aa13.2□□□□□ -0.3
SMAD3-201ENST00000327367 LY6HO94772 140 aa13.2□□□□□ -0.3
SMAD3-201ENST00000327367 DEFB131AP59861 70 aa13.2□□□□□ -0.3
SMAD3-201ENST00000327367 CFC1BP0CG36 223 aa13.2□□□□□ -0.3
SMAD3-201ENST00000327367 CFC1P0CG37 223 aa13.2□□□□□ -0.3
SMAD3-201ENST00000327367 TEX36Q5VZQ5 186 aa13.2□□□□□ -0.3
SMAD3-201ENST00000327367 F8VRH5 84 aa13.2□□□□□ -0.3
SMAD3-201ENST00000327367 ZNF561-AS1K7EIQ3 104 aa13.2□□□□□ -0.3
SMAD3-201ENST00000327367 ZNRF2Q8NHG8 242 aa13.2□□□□□ -0.3
SMAD3-201ENST00000327367 PATJQ8NI35 1801 aa13.19□□□□□ -0.3
SMAD3-201ENST00000327367 IGLL5B9A064 214 aa13.19□□□□□ -0.3
SMAD3-201ENST00000327367 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
SMAD3-201ENST00000327367 NKAPP1Q8N9T2 125 aa13.19□□□□□ -0.3
SMAD3-201ENST00000327367 TAL2Q16559 108 aa13.19□□□□□ -0.3
SMAD3-201ENST00000327367 KIR2DL5BA0A0G2JN68 375 aa13.19□□□□□ -0.3
SMAD3-201ENST00000327367 KIR2DL5BA0A0G2JPC4 375 aa13.19□□□□□ -0.3
SMAD3-201ENST00000327367 KIR2DL5AQ8N109 375 aa13.19□□□□□ -0.3
SMAD3-201ENST00000327367 FANCMQ8IYD8 2048 aa13.19□□□□□ -0.3
SMAD3-201ENST00000327367 IGLV3-32A0A0A0MS00 114 aa13.18□□□□□ -0.3
SMAD3-201ENST00000327367 J3KT08 172 aa13.18□□□□□ -0.3
SMAD3-201ENST00000327367 TRBV19A0A075B6N1 114 aa13.18□□□□□ -0.3
SMAD3-201ENST00000327367 PRDM6Q9NQX0 595 aa13.18□□□□□ -0.3
SMAD3-201ENST00000327367 SIVA1O15304 175 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms