RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 WNK1Q9H4A3 2382 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 IGHV1OR15-1A0A075B7D0 117 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 IGHV3-73A0A0B4J1V6 119 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 FHL1Q13642 323 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 RPP25LQ8N5L8 163 aaKnown RBP7.17□□□□□ -1.26
CD28-201ENST00000324106 IFI27L1Q96BM0 104 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 HS3ST6Q96QI5 342 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 SPAG8Q99932 426 aaPredicted RBP7.17□□□□□ -1.26
CD28-201ENST00000324106 BRCA2P51587 3418 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 IGHV7-4-1A0A0J9YVY3 117 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 ZNF561-AS1K7EIQ3 104 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 SPINK13Q1W4C9 94 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 FAM120AOSQ5T036 256 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 PHLDA1Q8WV24 401 aaPredicted RBP7.17□□□□□ -1.26
CD28-201ENST00000324106 TRBV25-1A0A075B6N4 114 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 F8WEM9 126 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 LYZL1Q6UWQ5 148 aa7.17□□□□□ -1.26
CD28-201ENST00000324106 CENPVL3A0A0U1RRI6 287 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 WDR86Q86TI4 376 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 TMEM256Q8N2U0 113 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 IL17DQ8TAD2 202 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 SLC25A2Q9BXI2 301 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 TMEM238C9JI98 176 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 POU2AF1Q16633 256 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 GFI1BQ5VTD9 330 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 RNF138Q8WVD3 245 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 MS4A6AQ9H2W1 248 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 ARMS2P0C7Q2 107 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 HOXB4P17483 251 aaPredicted RBP7.16□□□□□ -1.26
CD28-201ENST00000324106 C14orf178Q8N769 122 aaPredicted RBP7.16□□□□□ -1.26
CD28-201ENST00000324106 NAV3Q8IVL0 2385 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 MED13Q9UHV7 2174 aa7.16□□□□□ -1.26
CD28-201ENST00000324106 ZNF503-AS2A6NEH8 195 aa7.15□□□□□ -1.26
CD28-201ENST00000324106 CDK2AP2O75956 126 aa7.15□□□□□ -1.26
CD28-201ENST00000324106 AZU1P20160 251 aa7.15□□□□□ -1.26
CD28-201ENST00000324106 IFITM2Q01629 132 aa7.15□□□□□ -1.26
CD28-201ENST00000324106 LY6G5BQ8NDX9 201 aa7.15□□□□□ -1.26
CD28-201ENST00000324106 SSBP4Q9BWG4 385 aaPredicted RBP7.15□□□□□ -1.26
CD28-201ENST00000324106 CLPSL1A2RUU4 121 aa7.15□□□□□ -1.26
CD28-201ENST00000324106 PAX4O43316 350 aa7.15□□□□□ -1.26
CD28-201ENST00000324106 EVI2AP22794 236 aa7.15□□□□□ -1.26
CD28-201ENST00000324106 SRSF2Q01130 221 aaKnown RBP7.15□□□□□ -1.26
CD28-201ENST00000324106 NUP210Q8TEM1 1887 aaPredicted RBP7.15□□□□□ -1.26
CD28-201ENST00000324106 CHD8Q9HCK8 2581 aa7.15□□□□□ -1.26
CD28-201ENST00000324106 DOPEY1Q5JWR5 2465 aa7.15□□□□□ -1.27
CD28-201ENST00000324106 IGKV1-6A0A0C4DH72 117 aa7.15□□□□□ -1.27
CD28-201ENST00000324106 C15orf65H3BRN8 121 aa7.15□□□□□ -1.27
CD28-201ENST00000324106 HOXD3P31249 432 aaPredicted RBP7.15□□□□□ -1.27
CD28-201ENST00000324106 PLP1P60201 277 aa7.15□□□□□ -1.27
CD28-201ENST00000324106 LOXL1Q08397 574 aaPredicted RBP7.15□□□□□ -1.27
CD28-201ENST00000324106 C8orf86Q6ZUL3 223 aa7.15□□□□□ -1.27
CD28-201ENST00000324106 ZNRD1Q9P1U0 126 aa7.15□□□□□ -1.27
CD28-201ENST00000324106 PLXNA4Q9HCM2 1894 aa7.15□□□□□ -1.27
CD28-201ENST00000324106 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.15□□□□□ -1.27
CD28-201ENST00000324106 PFN1P07737 140 aaKnown RBP7.15□□□□□ -1.27
CD28-201ENST00000324106 MYCNOSP40205 109 aa7.15□□□□□ -1.27
CD28-201ENST00000324106 TMEM242Q9NWH2 141 aa7.15□□□□□ -1.27
CD28-201ENST00000324106 LSM4Q9Y4Z0 139 aaKnown RBP7.15□□□□□ -1.27
CD28-201ENST00000324106 GAGE12BA1L429 117 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 GGTLC3B5MD39 225 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 GAGE7O76087 117 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 GAGE12FP0CL80 117 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 GAGE12GP0CL81 117 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 GAGE12IP0CL82 117 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 WDR81Q562E7 1941 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 FOXI2Q6ZQN5 318 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 ATOH7Q8N100 152 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 DLX4Q92988 240 aaPredicted RBP7.14□□□□□ -1.27
CD28-201ENST00000324106 WFDC1Q9HC57 220 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 TYMSP04818 313 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 GP9P14770 177 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 LINC00205P59089 165 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 VWC2Q2TAL6 325 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 Q86TA4 180 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 TMEM170AQ8WVE7 144 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 CSTL1Q9H114 145 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 TNCP24821 2201 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 DKK1O94907 266 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 IGKCP01834 107 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 CGB3P0DN86 165 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 CD300EQ496F6 205 aaPredicted RBP7.14□□□□□ -1.27
CD28-201ENST00000324106 DUX4L9Q6RFH8 374 aaPredicted RBP7.14□□□□□ -1.27
CD28-201ENST00000324106 RNF144BQ7Z419 303 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 MRAPQ8TCY5 172 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 CTSZQ9UBR2 303 aa7.14□□□□□ -1.27
CD28-201ENST00000324106 LAMA2P24043 3122 aaKnown RBP7.14□□□□□ -1.27
CD28-201ENST00000324106 INSL3P51460 131 aa7.13□□□□□ -1.27
CD28-201ENST00000324106 ZNF493Q6ZR52 646 aa7.13□□□□□ -1.27
CD28-201ENST00000324106 TMEM75Q8N9X5 138 aa7.13□□□□□ -1.27
CD28-201ENST00000324106 TRBV19A0A075B6N1 114 aa7.13□□□□□ -1.27
CD28-201ENST00000324106 TRAV13-1A0A0B4J241 112 aa7.13□□□□□ -1.27
CD28-201ENST00000324106 MYMXA0A1B0GTQ4 84 aa7.13□□□□□ -1.27
CD28-201ENST00000324106 A0A1B0GW64 132 aa7.13□□□□□ -1.27
CD28-201ENST00000324106 TMEM89A2RUT3 159 aa7.13□□□□□ -1.27
CD28-201ENST00000324106 FAM231BA6NCW3 169 aa7.13□□□□□ -1.27
CD28-201ENST00000324106 GAGE12JA6NER3 117 aa7.13□□□□□ -1.27
CD28-201ENST00000324106 SSBP2P81877 361 aaPredicted RBP7.13□□□□□ -1.27
CD28-201ENST00000324106 GAGE1Q13065 139 aa7.13□□□□□ -1.27
CD28-201ENST00000324106 GAGE4Q13068 117 aa7.13□□□□□ -1.27
CD28-201ENST00000324106 GAGE5Q13069 117 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms