RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 CBLN1P23435 193 aa7.11□□□□□ -1.27
CD46-202ENST00000322918 BAGE3Q86Y29 109 aa7.11□□□□□ -1.27
CD46-202ENST00000322918 BAGE2Q86Y30 109 aa7.11□□□□□ -1.27
CD46-202ENST00000322918 OR4B1Q8NGF8 309 aa7.11□□□□□ -1.27
CD46-202ENST00000322918 MRPL32Q9BYC8 188 aaKnown RBP7.11□□□□□ -1.27
CD46-202ENST00000322918 UQCR10Q9UDW1 63 aa7.11□□□□□ -1.27
CD46-202ENST00000322918 K7EN84 100 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 TOMM40O96008 361 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 CRISP2P16562 243 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 A0A096LNT2 108 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 M0R3E3 92 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 ISLRO14498 428 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 PPBPP02775 128 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 IGLC2P0DOY2 106 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 IGLC3P0DOY3 106 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 CTRLP40313 264 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 OR8I2Q8N0Y5 310 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 C19orf24Q9BVV8 132 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 ZNF586Q9NXT0 402 aa7.1□□□□□ -1.27
CD46-202ENST00000322918 NIPBLQ6KC79 2804 aaeCLIP7.09□□□□□ -1.276e-8■■■■■ 30.6
CD46-202ENST00000322918 SORL1Q92673 2214 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 JMJD1CQ15652 2540 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 FAM110DQ8TAY7 271 aaPredicted RBP7.09□□□□□ -1.27
CD46-202ENST00000322918 PSMG3-AS1Q96PY0 264 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 RNF2Q99496 336 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 Q9H3A6 140 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 HIVEP2P31629 2446 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 HOXA3O43365 443 aaPredicted RBP7.09□□□□□ -1.27
CD46-202ENST00000322918 UBE2G1P62253 170 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 VAMP3Q15836 100 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 ATOH7Q8N100 152 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 SIGLECL1Q8N7X8 197 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 Q8N976 141 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 SFRP2Q96HF1 295 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 CCDC140Q96MF4 163 aa7.09□□□□□ -1.27
CD46-202ENST00000322918 TMEM238C9JI98 176 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 GP9P14770 177 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 HLA-DMBP28068 263 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 PVRIGQ6DKI7 326 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 GOLT1AQ6ZVE7 132 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 SRSF8Q9BRL6 282 aaKnown RBP7.08□□□□□ -1.28
CD46-202ENST00000322918 CSTL1Q9H114 145 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 MEGF9Q9H1U4 602 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 CR1P17927 2039 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 PEX7O00628 323 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 APOHP02749 345 aaPredicted RBP7.08□□□□□ -1.28
CD46-202ENST00000322918 RPL19P84098 196 aaKnown RBP7.08□□□□□ -1.28
CD46-202ENST00000322918 ATP5G2Q06055 141 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 BPIFA4PQ86YQ2 179 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 OR4F17Q8NGA8 305 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 NOTCH3Q9UM47 2321 aa7.08□□□□□ -1.28
CD46-202ENST00000322918 A0A1W2PRE2 83 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 A6NDX4 124 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 RPL11P62913 178 aaKnown RBP7.07□□□□□ -1.28
CD46-202ENST00000322918 NUDT11Q96G61 164 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 MRPL18Q9H0U6 180 aaKnown RBP7.07□□□□□ -1.28
CD46-202ENST00000322918 MRPL27Q9P0M9 148 aaKnown RBP7.07□□□□□ -1.28
CD46-202ENST00000322918 FRMD6-AS1P0C7T7 363 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 PMCHP20382 165 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 TSPOP30536 169 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 YPEL3P61236 119 aaPredicted RBP7.07□□□□□ -1.28
CD46-202ENST00000322918 FOXL1Q12952 345 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 OCIAD2Q56VL3 154 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 PRNTQ86SH4 94 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 C11orf44Q8N8P7 122 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 ZNF502Q8TBZ5 544 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 ZNF48Q96MX3 618 aaPredicted RBP7.07□□□□□ -1.28
CD46-202ENST00000322918 CST9LQ9H4G1 147 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 CHTOPQ9Y3Y2 248 aaKnown RBP7.07□□□□□ -1.28
CD46-202ENST00000322918 LOXL1Q08397 574 aaPredicted RBP7.07□□□□□ -1.28
CD46-202ENST00000322918 OR2D3Q8NGH3 330 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 OR10G8Q8NGN5 311 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 SMR3AQ99954 134 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 SHANK2-AS3Q9BTD1 123 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 NRN1Q9NPD7 142 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 EPDR1Q9UM22 224 aa7.07□□□□□ -1.28
CD46-202ENST00000322918 PRSS47A8MTI9 375 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 GPX1P07203 203 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 ESDP10768 282 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 SRD5A1P18405 259 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 AMTP48728 403 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 KHDC1LQ5JSQ8 128 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 EEF1AKMT3Q96AZ1 226 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 RABAC1Q9UI14 185 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 TRAV30A0A087WSZ9 112 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 ZNF785A8K8V0 405 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 CIDEAO60543 219 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 KRTAP1-3Q8IUG1 177 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 RNF182Q8N6D2 247 aa7.06□□□□□ -1.28
CD46-202ENST00000322918 GATA3P23771 443 aa7.05□□□□□ -1.28
CD46-202ENST00000322918 ARL3P36405 182 aa7.05□□□□□ -1.28
CD46-202ENST00000322918 IER3P46695 156 aa7.05□□□□□ -1.28
CD46-202ENST00000322918 UNQ9165/PRO28630Q6UXU0 137 aa7.05□□□□□ -1.28
CD46-202ENST00000322918 STXBP6Q8NFX7 210 aa7.05□□□□□ -1.28
CD46-202ENST00000322918 OTOGQ6ZRI0 2925 aa7.05□□□□□ -1.28
CD46-202ENST00000322918 H3BRN7 92 aa7.05□□□□□ -1.28
CD46-202ENST00000322918 ZNF253O75346 499 aa7.05□□□□□ -1.28
CD46-202ENST00000322918 HIST1H1EP10412 219 aaKnown RBP7.05□□□□□ -1.28
CD46-202ENST00000322918 TXNDC17Q9BRA2 123 aa7.05□□□□□ -1.28
CD46-202ENST00000322918 IGKV2-40A0A087WW87 121 aaPredicted RBP7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms