RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 C21orf62Q9NYP8 219 aa6.8□□□□□ -1.32
CLK1-201ENST00000321356 SIGLEC8Q9NYZ4 499 aa6.8□□□□□ -1.32
CLK1-201ENST00000321356 S4R3C0 116 aa6.8□□□□□ -1.32
CLK1-201ENST00000321356 ABCA4P78363 2273 aa6.8□□□□□ -1.32
CLK1-201ENST00000321356 ARHGAP32A7KAX9 2087 aa6.8□□□□□ -1.32
CLK1-201ENST00000321356 D6R8Y8 96 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 PRB4P10163 310 aaPredicted RBP6.79□□□□□ -1.32
CLK1-201ENST00000321356 RPL7P18124 248 aaKnown RBP6.79□□□□□ -1.32
CLK1-201ENST00000321356 GRNP28799 593 aaKnown RBP6.79□□□□□ -1.32
CLK1-201ENST00000321356 RBX1P62877 108 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 LOXL1Q08397 574 aaPredicted RBP6.79□□□□□ -1.32
CLK1-201ENST00000321356 SAPCD1Q5SSQ6 148 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 ORMDL3Q8N138 153 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 PRELID3AQ96N28 172 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 PRR25Q96S07 402 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 TPPP3Q9BW30 176 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 MUC6Q6W4X9 2439 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 IGKV2-40A0A087WW87 121 aaPredicted RBP6.79□□□□□ -1.32
CLK1-201ENST00000321356 H0Y8G0 127 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 K7ENP7 123 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 CD5LO43866 347 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 IGKV2D-40P01614 121 aaPredicted RBP6.79□□□□□ -1.32
CLK1-201ENST00000321356 IGHG4P01861 327 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 IGLC6P0CF74 106 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 FGF6P10767 208 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 GPR183P32249 361 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 RPS20P60866 119 aaKnown RBP6.79□□□□□ -1.32
CLK1-201ENST00000321356 EBI3Q14213 229 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 LGALS9BQ3B8N2 356 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 MRPL51Q4U2R6 128 aaKnown RBP6.79□□□□□ -1.32
CLK1-201ENST00000321356 LGALS9CQ6DKI2 356 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 ZNF575Q86XF7 245 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 AMN1Q8IY45 258 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 NPFFR1Q9GZQ6 430 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 SPTBN2O15020 2390 aa6.79□□□□□ -1.32
CLK1-201ENST00000321356 PTPRQQ9UMZ3 2332 aa6.78□□□□□ -1.32
CLK1-201ENST00000321356 A0A087X0K7 114 aa6.78□□□□□ -1.32
CLK1-201ENST00000321356 OOSP1A8MZH6 123 aa6.78□□□□□ -1.32
CLK1-201ENST00000321356 LY6HO94772 140 aa6.78□□□□□ -1.32
CLK1-201ENST00000321356 CTSGP08311 255 aa6.78□□□□□ -1.32
CLK1-201ENST00000321356 EGR2P11161 476 aaPredicted RBP6.78□□□□□ -1.32
CLK1-201ENST00000321356 NBL1P41271 181 aa6.78□□□□□ -1.32
CLK1-201ENST00000321356 SRSF2Q01130 221 aaKnown RBP6.78□□□□□ -1.32
CLK1-201ENST00000321356 HES1Q14469 280 aa6.78□□□□□ -1.32
CLK1-201ENST00000321356 CCDC144NLQ6NUI1 221 aa6.78□□□□□ -1.32
CLK1-201ENST00000321356 C1orf122Q6ZSJ8 110 aa6.78□□□□□ -1.32
CLK1-201ENST00000321356 OR4C5Q8NGB2 326 aa6.78□□□□□ -1.32
CLK1-201ENST00000321356 TIMD4Q96H15 378 aa6.78□□□□□ -1.32
CLK1-201ENST00000321356 SMAD5-AS1Q9Y6J3 95 aa6.78□□□□□ -1.32
CLK1-201ENST00000321356 TMSB15BA0A087X1C1 80 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 FAM90A27PA6NNH2 459 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 ZNF80P51504 273 aaPredicted RBP6.77□□□□□ -1.33
CLK1-201ENST00000321356 FOXE3Q13461 319 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 VAMP3Q15836 100 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 C11orf71Q6IPW1 123 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 DYNAPQ8N1N2 210 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 OR1N2Q8NGR9 330 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 CNFNQ9BYD5 112 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 THYN1Q9P016 225 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 TIMM8BQ9Y5J9 83 aaPredicted RBP6.77□□□□□ -1.33
CLK1-201ENST00000321356 LOC389332A0A1B0GUA5 103 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 OR2T8A6NH00 312 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 HBDP02042 147 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 BMI1P35226 326 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 KLK9Q2XQG4 91 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 ANKRD39Q53RE8 183 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 VMO1Q7Z5L0 202 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 FER1L6-AS1Q8NA97 138 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 OR8A1Q8NGG7 326 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 Q8TAT8 98 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 VGLL1Q99990 258 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 RABAC1Q9UI14 185 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 KLK9Q9UKQ9 250 aa6.77□□□□□ -1.33
CLK1-201ENST00000321356 LINC01546A6NGU7 62 aa6.76□□□□□ -1.33
CLK1-201ENST00000321356 SCGB2A1O75556 95 aa6.76□□□□□ -1.33
CLK1-201ENST00000321356 NPYP01303 97 aa6.76□□□□□ -1.33
CLK1-201ENST00000321356 SEC11AP67812 179 aa6.76□□□□□ -1.33
CLK1-201ENST00000321356 MINOS1Q5TGZ0 78 aa6.76□□□□□ -1.33
CLK1-201ENST00000321356 MINOS1-NBL1R4GNA1 71 aa6.76□□□□□ -1.33
CLK1-201ENST00000321356 SPTA1P02549 2419 aa6.76□□□□□ -1.33
CLK1-201ENST00000321356 IGHV7-81A0A0B4J1V7 117 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 A0A1W2PRD5 423 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 A0A1W2PRF3 423 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 A0A1W2PRM7 423 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 NCBP2LA6PVI3 153 aaKnown RBP6.75□□□□□ -1.33
CLK1-201ENST00000321356 IGHV3-23P01764 117 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 CKS2P33552 79 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 CDKN1BP46527 198 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 TMEM97Q5BJF2 176 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 ERASQ7Z444 233 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 BOD1L2Q8IYS8 172 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 PPBPP02775 128 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 HLA-DMBP28068 263 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 S100A7P31151 101 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 CACNG7P62955 275 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 CDSNQ15517 529 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 TWIST1Q15672 202 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 ZNF502Q8TBZ5 544 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 IFI27L1Q96BM0 104 aa6.75□□□□□ -1.33
CLK1-201ENST00000321356 RNF185Q96GF1 192 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms