RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 KIAA1671Q9BY89 1806 aa13.77□□□□□ -0.2
SMCHD1-201ENST00000320876 IGHG4P01861 327 aa13.77□□□□□ -0.2
SMCHD1-201ENST00000320876 IGKV1-27A0A075B6S5 117 aa13.77□□□□□ -0.21
SMCHD1-201ENST00000320876 A0A1W2PPM0 123 aa13.77□□□□□ -0.21
SMCHD1-201ENST00000320876 A0A087WWL8 130 aa13.77□□□□□ -0.21
SMCHD1-201ENST00000320876 GAGE12HA6NDE8 117 aa13.77□□□□□ -0.21
SMCHD1-201ENST00000320876 C3orf36Q3SXR2 165 aa13.77□□□□□ -0.21
SMCHD1-201ENST00000320876 MALRD1Q5VYJ5 2156 aa13.77□□□□□ -0.21
SMCHD1-201ENST00000320876 PMVKQ15126 192 aa13.77□□□□□ -0.21
SMCHD1-201ENST00000320876 A0A1W2PR77 199 aa13.76□□□□□ -0.21
SMCHD1-201ENST00000320876 I3L3M4 83 aa13.76□□□□□ -0.21
SMCHD1-201ENST00000320876 IGHV1-46P01743 117 aa13.76□□□□□ -0.21
SMCHD1-201ENST00000320876 NTF4P34130 210 aa13.76□□□□□ -0.21
SMCHD1-201ENST00000320876 TP53TG1Q9Y2A0 90 aa13.76□□□□□ -0.21
SMCHD1-201ENST00000320876 C5orf64Q2M2E5 130 aa13.76□□□□□ -0.21
SMCHD1-201ENST00000320876 CEND1Q8N111 149 aa13.76□□□□□ -0.21
SMCHD1-201ENST00000320876 Q6ZS49 121 aa13.76□□□□□ -0.21
SMCHD1-201ENST00000320876 HAPLN4Q86UW8 402 aa13.76□□□□□ -0.21
SMCHD1-201ENST00000320876 PRSS46E5RG02 174 aa13.76□□□□□ -0.21
SMCHD1-201ENST00000320876 IGHV2-70P01814 119 aa13.76□□□□□ -0.21
SMCHD1-201ENST00000320876 NDPQ00604 133 aa13.76□□□□□ -0.21
SMCHD1-201ENST00000320876 TFF1P04155 84 aa13.75□□□□□ -0.21
SMCHD1-201ENST00000320876 M0R1W7 72 aa13.75□□□□□ -0.21
SMCHD1-201ENST00000320876 DSCR9P59020 149 aa13.75□□□□□ -0.21
SMCHD1-201ENST00000320876 NSUN5P1Q3KNT7 163 aa13.75□□□□□ -0.21
SMCHD1-201ENST00000320876 C18orf32Q8TCD1 76 aa13.75□□□□□ -0.21
SMCHD1-201ENST00000320876 COX8AP10176 69 aa13.75□□□□□ -0.21
SMCHD1-201ENST00000320876 ADCYAP1P18509 176 aa13.75□□□□□ -0.21
SMCHD1-201ENST00000320876 BUB1B-PAK6H3BSN5 160 aa13.75□□□□□ -0.21
SMCHD1-201ENST00000320876 TCTEX1D4Q5JR98 221 aa13.75□□□□□ -0.21
SMCHD1-201ENST00000320876 IGLV3-19P01714 112 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 IGHG3P01860 377 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 HLA-DMBP28068 263 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 PRR31Q5SQ13 230 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 LYPD3O95274 346 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 FGF6P10767 208 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 DAZ1Q9NQZ3 744 aaKnown RBP13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 HGFACQ04756 655 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 FOXF2Q12947 444 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 SPRR3Q9UBC9 169 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 IGKV1-12A0A0C4DH73 117 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 IGKV1D-12P01611 117 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 GAS1P54826 345 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 DEFB104AQ8WTQ1 72 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 ZNF492Q9P255 531 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 PRB4P10163 310 aaPredicted RBP13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 TMEM219Q86XT9 240 aa13.74□□□□□ -0.21
SMCHD1-201ENST00000320876 TRAV13-2A0A0B4J235 113 aa13.73□□□□□ -0.21
SMCHD1-201ENST00000320876 TRAV3A0A0B4J244 114 aa13.73□□□□□ -0.21
SMCHD1-201ENST00000320876 C15orf62A8K5M9 175 aa13.73□□□□□ -0.21
SMCHD1-201ENST00000320876 NKAPP1Q8N9T2 125 aa13.73□□□□□ -0.21
SMCHD1-201ENST00000320876 METRNQ9UJH8 293 aa13.73□□□□□ -0.21
SMCHD1-201ENST00000320876 PFN1P07737 140 aaKnown RBP13.73□□□□□ -0.21
SMCHD1-201ENST00000320876 AZU1P20160 251 aa13.73□□□□□ -0.21
SMCHD1-201ENST00000320876 PRO1854Q9UHT4 67 aa13.73□□□□□ -0.21
SMCHD1-201ENST00000320876 CFHR2P36980 270 aa13.73□□□□□ -0.21
SMCHD1-201ENST00000320876 IL17RELQ6ZVW7 336 aa13.73□□□□□ -0.21
SMCHD1-201ENST00000320876 Q8N8P6 123 aa13.73□□□□□ -0.21
SMCHD1-201ENST00000320876 TMEM178BH3BS89 294 aa13.72□□□□□ -0.21
SMCHD1-201ENST00000320876 SHANK2-AS3Q9BTD1 123 aa13.72□□□□□ -0.21
SMCHD1-201ENST00000320876 SIGLEC9Q9Y336 463 aa13.72□□□□□ -0.21
SMCHD1-201ENST00000320876 TMEM126AQ9H061 195 aa13.72□□□□□ -0.21
SMCHD1-201ENST00000320876 MMP23AO75900 390 aa13.72□□□□□ -0.21
SMCHD1-201ENST00000320876 ZNF561-AS1K7EIQ3 104 aa13.72□□□□□ -0.21
SMCHD1-201ENST00000320876 ARMS2P0C7Q2 107 aa13.72□□□□□ -0.21
SMCHD1-201ENST00000320876 FGFBP3Q8TAT2 258 aa13.72□□□□□ -0.21
SMCHD1-201ENST00000320876 LINC00473A8K010 186 aa13.72□□□□□ -0.21
SMCHD1-201ENST00000320876 C10orf55Q5SWW7 151 aa13.72□□□□□ -0.21
SMCHD1-201ENST00000320876 RHODO00212 210 aa13.72□□□□□ -0.21
SMCHD1-201ENST00000320876 SMIM27A0A1W2PRY6 76 aa13.71□□□□□ -0.21
SMCHD1-201ENST00000320876 MCRIP2Q9BUT9 160 aaKnown RBP13.71□□□□□ -0.21
SMCHD1-201ENST00000320876 PCNX3Q9H6A9 2034 aa13.71□□□□□ -0.21
SMCHD1-201ENST00000320876 EGR2P11161 476 aaPredicted RBP13.71□□□□□ -0.21
SMCHD1-201ENST00000320876 PRSS57Q6UWY2 283 aa13.71□□□□□ -0.21
SMCHD1-201ENST00000320876 TRBV25-1A0A075B6N4 114 aa13.71□□□□□ -0.22
SMCHD1-201ENST00000320876 NDUFB8O95169 186 aa13.71□□□□□ -0.22
SMCHD1-201ENST00000320876 LTBRP36941 435 aa13.71□□□□□ -0.22
SMCHD1-201ENST00000320876 MORN5Q5VZ52 161 aa13.71□□□□□ -0.22
SMCHD1-201ENST00000320876 PRR14LQ5THK1 2151 aa13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 SRSF2Q01130 221 aaKnown RBP13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 FAM104BQ5XKR9 115 aa13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 RPL35AP18077 110 aaKnown RBP13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 ANKRD29Q8N6D5 301 aa13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 LOC102723996A0A087X1L8 192 aa13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 IGHV3-53P01767 116 aa13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 NPSP0C0P6 89 aa13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 MST1P26927 711 aa13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 CD177Q8N6Q3 437 aa13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 CEACAM8P31997 349 aaPredicted RBP13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 QRFPP83859 136 aa13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 ETDBQ3ZM63 59 aa13.7□□□□□ -0.22
SMCHD1-201ENST00000320876 GGNQ86UU5 652 aa13.69□□□□□ -0.22
SMCHD1-201ENST00000320876 CRLF1O75462 422 aa13.69□□□□□ -0.22
SMCHD1-201ENST00000320876 THAP8Q8NA92 274 aa13.69□□□□□ -0.22
SMCHD1-201ENST00000320876 TMEM14BQ9NUH8 114 aa13.69□□□□□ -0.22
SMCHD1-201ENST00000320876 E9PLN8 166 aa13.69□□□□□ -0.22
SMCHD1-201ENST00000320876 PSPNO60542 156 aa13.69□□□□□ -0.22
SMCHD1-201ENST00000320876 SLC25A16P16260 332 aa13.69□□□□□ -0.22
SMCHD1-201ENST00000320876 PNRC2Q9NPJ4 139 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms