RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 C5orf64Q2M2E5 130 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 C10orf113Q5VZT2 155 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 FAM71F2Q6NXP2 309 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 ZNF329Q86UD4 541 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 MBD6Q96DN6 1003 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 CLUHP3Q96NS8 147 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 ALKBH7Q9BT30 221 aaPredicted RBP5.98□□□□□ -1.45
TRIM55-202ENST00000315962 TAS2R45P59539 299 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 CIARTQ8N365 385 aaPredicted RBP5.98□□□□□ -1.45
TRIM55-202ENST00000315962 OR4A5Q8NH83 315 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 F11RQ9Y624 299 aaKnown RBP5.98□□□□□ -1.45
TRIM55-202ENST00000315962 COX11Q9Y6N1 276 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 TRBV9A0A0B4J1U6 114 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 C2orf70A6NJV1 201 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 LCNL1Q6ZST4 164 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 OR4F17Q8NGA8 305 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 GTSF1Q8WW33 167 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 AJUBAQ96IF1 538 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 HIF1ANQ9NWT6 349 aa5.98□□□□□ -1.45
TRIM55-202ENST00000315962 TRAV9-2A0A087WT02 112 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 TMSB15BA0A087X1C1 80 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 IGHV3-66A0A0C4DH42 116 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 TCRBV4S1A1TA0A5B7 111 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 EXOC3-AS1Q8N2X6 119 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 CACNG8Q8WXS5 425 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 DUX5Q96PT3 197 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 PIMREGQ9BSJ6 248 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 TRAV9-1A0A075B6T8 112 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 IGHV3-49A0A0A0MS15 119 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 IGHV1-24A0A0C4DH33 117 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 TMEM238C9JI98 176 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 NPFFO15130 113 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 FSTL3O95633 263 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 WFDC3Q8IUB2 231 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 KLHDC1Q8N7A1 406 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 ZNF738Q8NE65 137 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 C10orf105Q8TEF2 133 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 ARPC1AQ92747 370 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 C17orf77Q96MU5 243 aa5.97□□□□□ -1.45
TRIM55-202ENST00000315962 A0A1W2PRE2 83 aa5.96□□□□□ -1.45
TRIM55-202ENST00000315962 FAM106CPP0CH98 169 aa5.96□□□□□ -1.45
TRIM55-202ENST00000315962 COX6B1P14854 86 aa5.96□□□□□ -1.45
TRIM55-202ENST00000315962 UBE2E1P51965 193 aa5.96□□□□□ -1.45
TRIM55-202ENST00000315962 UBE2V1Q13404 147 aa5.96□□□□□ -1.45
TRIM55-202ENST00000315962 Q6ZS46 218 aa5.96□□□□□ -1.45
TRIM55-202ENST00000315962 FXYD5Q96DB9 178 aa5.96□□□□□ -1.45
TRIM55-202ENST00000315962 RASL11BQ9BPW5 248 aa5.96□□□□□ -1.45
TRIM55-202ENST00000315962 UNC79Q9P2D8 2635 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 IGHV7-81A0A0B4J1V7 117 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 LOC389332A0A1B0GUA5 103 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 RNF223E7ERA6 249 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 I3L2K1 104 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 K7EIM0 57 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 ATP6V0E1O15342 81 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 IGKV1-17P01599 117 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 IGFL4Q6B9Z1 124 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 HIST2H2BDQ6DRA6 164 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 PRNTQ86SH4 94 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 Q8N9W7 124 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 WFDC12Q8WWY7 111 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 TMEM70Q9BUB7 260 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 LY96Q9Y6Y9 160 aa5.96□□□□□ -1.46
TRIM55-202ENST00000315962 PSMB11A5LHX3 300 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 ZNF207O43670 478 aaKnown RBP5.95□□□□□ -1.46
TRIM55-202ENST00000315962 TGFAP01135 160 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 IL4P05112 153 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 BLCAPP62952 87 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 FAM106AQ4KMX7 169 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 AMMECR1LQ6DCA0 310 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 CCDC144NLQ6NUI1 221 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 SMIM15Q7Z3B0 74 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 FLNBO75369 2602 aaKnown RBP5.95□□□□□ -1.46
TRIM55-202ENST00000315962 GNG7O60262 68 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 LEPROTL1O95214 131 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 NCR2O95944 276 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 IGLC1P0CG04 106 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 EGR2P11161 476 aaPredicted RBP5.95□□□□□ -1.46
TRIM55-202ENST00000315962 TM4SF20Q53R12 229 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 ZNF562Q6V9R5 426 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 GRAMD2BQ96HH9 432 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 FANCD2OSQ96PS1 177 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 VPS25Q9BRG1 176 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 GOSR1O95249 250 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 PPBPP02775 128 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 FCGR2BP31994 310 aaPredicted RBP5.95□□□□□ -1.46
TRIM55-202ENST00000315962 GOLT1AQ6ZVE7 132 aa5.95□□□□□ -1.46
TRIM55-202ENST00000315962 H3BUX3 64 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 CHEK1O14757 476 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 P01737 135 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 HBBP68871 147 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 LOXL1Q08397 574 aaPredicted RBP5.94□□□□□ -1.46
TRIM55-202ENST00000315962 C15orf32Q32M92 178 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 NPBQ8NG41 125 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 CHRDL1Q9BU40 450 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 EPDR1Q9UM22 224 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 WNK1Q9H4A3 2382 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 SYS1-DBNDD2H3BUS1 97 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 NDUFA3O95167 84 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 MSMBP08118 114 aa5.94□□□□□ -1.46
TRIM55-202ENST00000315962 NBEAP1P0C6P0 100 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms