RNA–Protein interactions for RNA: ENST00000315660.8

TSC22D3-201, Transcript of TSC22 domain family member 3, humanhuman

TSL 1 (best) BASIC

Gene TSC22D3, Length 2,213 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-201ENST00000315660 SPATA12Q7Z6I5 190 aa12.21□□□□□ -0.46
TSC22D3-201ENST00000315660 PIP4P2Q8N4L2 257 aa12.21□□□□□ -0.46
TSC22D3-201ENST00000315660 URB1-AS1Q96HZ7 61 aa12.21□□□□□ -0.46
TSC22D3-201ENST00000315660 M0R3E3 92 aa12.2□□□□□ -0.46
TSC22D3-201ENST00000315660 ZC2HC1AQ96GY0 325 aa12.2□□□□□ -0.46
TSC22D3-201ENST00000315660 PIMREGQ9BSJ6 248 aa12.2□□□□□ -0.46
TSC22D3-201ENST00000315660 CACNA1AO00555 2505 aa12.2□□□□□ -0.46
TSC22D3-201ENST00000315660 GOSR1O95249 250 aa12.19□□□□□ -0.46
TSC22D3-201ENST00000315660 CT45A10P0DMU9 189 aa12.19□□□□□ -0.46
TSC22D3-201ENST00000315660 RHOGP84095 191 aa12.19□□□□□ -0.46
TSC22D3-201ENST00000315660 CHCHD1Q96BP2 118 aaKnown RBP12.19□□□□□ -0.46
TSC22D3-201ENST00000315660 CSMD1Q96PZ7 3565 aa12.19□□□□□ -0.46
TSC22D3-201ENST00000315660 OR4C46A6NHA9 309 aa12.19□□□□□ -0.46
TSC22D3-201ENST00000315660 CRXO43186 299 aaPredicted RBP12.19□□□□□ -0.46
TSC22D3-201ENST00000315660 GPR183P32249 361 aa12.19□□□□□ -0.46
TSC22D3-201ENST00000315660 UBE2V1Q13404 147 aa12.19□□□□□ -0.46
TSC22D3-201ENST00000315660 PRR31Q5SQ13 230 aa12.19□□□□□ -0.46
TSC22D3-201ENST00000315660 C16orf54Q6UWD8 224 aa12.19□□□□□ -0.46
TSC22D3-201ENST00000315660 ZNF502Q8TBZ5 544 aa12.19□□□□□ -0.46
TSC22D3-201ENST00000315660 IGHV1-24A0A0C4DH33 117 aa12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 SH2D7A6NKC9 451 aaPredicted RBP12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 ZNF785A8K8V0 405 aa12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 CHEK1O14757 476 aa12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 PRB4P10163 310 aaPredicted RBP12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 FOXA3P55318 350 aaPredicted RBP12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 KLK9Q2XQG4 91 aa12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 Q6ZVH6 145 aa12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 ARL6IP6Q8N6S5 226 aa12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 CCL19Q99731 98 aa12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 ST20Q9HBF5 79 aa12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 KLK9Q9UKQ9 250 aa12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 M0QZ24 198 aa12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 PAX8Q06710 450 aa12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 SVEP1Q4LDE5 3571 aa12.18□□□□□ -0.46
TSC22D3-201ENST00000315660 TMEM8BA6NDV4 472 aa12.17□□□□□ -0.46
TSC22D3-201ENST00000315660 HAX1O00165 279 aa12.17□□□□□ -0.46
TSC22D3-201ENST00000315660 CLEC3BP05452 202 aa12.17□□□□□ -0.46
TSC22D3-201ENST00000315660 RAB9AP51151 201 aa12.17□□□□□ -0.46
TSC22D3-201ENST00000315660 ASCL2Q99929 193 aa12.17□□□□□ -0.46
TSC22D3-201ENST00000315660 FBLL1A6NHQ2 334 aaKnown RBP12.17□□□□□ -0.46
TSC22D3-201ENST00000315660 SYS1-DBNDD2H3BUS1 97 aa12.17□□□□□ -0.46
TSC22D3-201ENST00000315660 LEPROTL1O95214 131 aa12.17□□□□□ -0.46
TSC22D3-201ENST00000315660 PCP4P48539 62 aa12.17□□□□□ -0.46
TSC22D3-201ENST00000315660 C21orf62-AS1Q17RA5 79 aa12.17□□□□□ -0.46
TSC22D3-201ENST00000315660 SPTAN1Q13813 2472 aaKnown RBP12.16□□□□□ -0.46
TSC22D3-201ENST00000315660 A0A1B0GUT8 65 aa12.16□□□□□ -0.46
TSC22D3-201ENST00000315660 Q6AWC8 147 aa12.16□□□□□ -0.46
TSC22D3-201ENST00000315660 C5orf56Q8N8D9 126 aa12.16□□□□□ -0.46
TSC22D3-201ENST00000315660 IGHV3-35A0A0C4DH35 117 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 NDUFS8O00217 210 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 EEF1AKMT3Q96AZ1 226 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 MOB4Q9Y3A3 225 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 CFAP46Q8IYW2 2715 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 IGHV1-69DA0A0B4J2H0 117 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 IGHV4-61A0A0C4DH41 118 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 LINC01548A6NM66 108 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 G3V318 75 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 IGHV1-69P01742 117 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 RIGQ13278 110 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 SAPCD1Q5SSQ6 148 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 CLEC2AQ6UVW9 174 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 TMEM191AQ9H0A3 160 aa12.15□□□□□ -0.46
TSC22D3-201ENST00000315660 LOC102724200A0A096LPH7 203 aaPredicted RBP12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 TRBV7-1A0A0A6YYK4 115 aa12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 A0A1B0GW15 77 aa12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 LINC00173Q6ZV60 143 aa12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 IGHV3OR16-10A0A075B7F0 116 aa12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 IGHV3OR16-8A0A075B7F1 116 aa12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 HSBP1L1C9JCN9 74 aa12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 APOHP02749 345 aaPredicted RBP12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 CRIP1P50238 77 aa12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 RNASE8Q8TDE3 154 aaKnown RBP12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 C10orf105Q8TEF2 133 aa12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 NDFIP1Q9BT67 221 aa12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 SMAD5-AS1Q9Y6J3 95 aa12.14□□□□□ -0.47
TSC22D3-201ENST00000315660 ABCA2Q9BZC7 2435 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 hDV102S1A0JD36 115 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 K7EP13 123 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 OR5AL1P0C617 328 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 CLEC19AQ6UXS0 136 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 TMEM219Q86XT9 240 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 C8orf49Q96NF6 230 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 ZFAND3Q9H8U3 227 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 TP73-AS1Q9UF72 201 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 IGKV2-40A0A087WW87 121 aaPredicted RBP12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 TRAV40A0A0B4J280 105 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 IGKV2D-40P01614 121 aaPredicted RBP12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 SLC25A34Q6PIV7 304 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 CCDC140Q96MF4 163 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 MAP1LC3CQ9BXW4 147 aa12.13□□□□□ -0.47
TSC22D3-201ENST00000315660 CACNA1BQ00975 2339 aa12.12□□□□□ -0.47
TSC22D3-201ENST00000315660 BUB3O43684 328 aa12.12□□□□□ -0.47
TSC22D3-201ENST00000315660 ATP5J2P56134 94 aa12.12□□□□□ -0.47
TSC22D3-201ENST00000315660 MPV17L2Q567V2 206 aa12.12□□□□□ -0.47
TSC22D3-201ENST00000315660 OR4C5Q8NGB2 326 aa12.12□□□□□ -0.47
TSC22D3-201ENST00000315660 TPPP3Q9BW30 176 aa12.12□□□□□ -0.47
TSC22D3-201ENST00000315660 TMEM189A5PLL7 270 aa12.11□□□□□ -0.47
TSC22D3-201ENST00000315660 ARMS2P0C7Q2 107 aa12.11□□□□□ -0.47
TSC22D3-201ENST00000315660 RBX1P62877 108 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms