RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ST6GALNAC6Q969X2 333 aa10.8□□□□□ -0.68
RFFL-201ENST00000315249 OSTCQ9NRP0 149 aa10.8□□□□□ -0.68
RFFL-201ENST00000315249 MRPL16Q9NX20 251 aaKnown RBP10.8□□□□□ -0.68
RFFL-201ENST00000315249 ITGB1BP1O14713 200 aa10.8□□□□□ -0.68
RFFL-201ENST00000315249 ORMDL2Q53FV1 153 aa10.8□□□□□ -0.68
RFFL-201ENST00000315249 Q6ZRM9 215 aa10.8□□□□□ -0.68
RFFL-201ENST00000315249 PMCHL2Q9BQD1 86 aa10.8□□□□□ -0.68
RFFL-201ENST00000315249 TDGF1P3P51864 188 aa10.8□□□□□ -0.68
RFFL-201ENST00000315249 TMEM14EPQ6UXP3 125 aa10.8□□□□□ -0.68
RFFL-201ENST00000315249 STAG3L3P0CL85 134 aa10.8□□□□□ -0.68
RFFL-201ENST00000315249 TMEM14BQ9NUH8 114 aa10.8□□□□□ -0.68
RFFL-201ENST00000315249 CTSZQ9UBR2 303 aa10.8□□□□□ -0.68
RFFL-201ENST00000315249 ARHGAP21Q5T5U3 1957 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 S100A7L2Q5SY68 101 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 UQCR10Q9UDW1 63 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 HIVEP3Q5T1R4 2406 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 PAX9P55771 341 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 LSM4Q9Y4Z0 139 aaKnown RBP10.79□□□□□ -0.68
RFFL-201ENST00000315249 LURAP1LQ8IV03 231 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 ELANEP08246 267 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 SMIM6P0DI80 62 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 HIST2H2BCQ6DN03 193 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 A0A096LPF7 62 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 PPBPP02775 128 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 AZU1P20160 251 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 RPP25LQ8N5L8 163 aaKnown RBP10.79□□□□□ -0.68
RFFL-201ENST00000315249 NDUFA4L2Q9NRX3 87 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 EREGO14944 169 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 RSPO1Q2MKA7 263 aaPredicted RBP10.79□□□□□ -0.68
RFFL-201ENST00000315249 Q8NA96 180 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 C14orf144Q96I85 54 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 SORL1Q92673 2214 aa10.79□□□□□ -0.68
RFFL-201ENST00000315249 NPC2P61916 151 aa10.78□□□□□ -0.68
RFFL-201ENST00000315249 Q6ZS49 121 aa10.78□□□□□ -0.68
RFFL-201ENST00000315249 TSKUQ8WUA8 353 aa10.78□□□□□ -0.68
RFFL-201ENST00000315249 CHTOPQ9Y3Y2 248 aaKnown RBP10.78□□□□□ -0.68
RFFL-201ENST00000315249 WDR87Q6ZQQ6 2873 aa10.78□□□□□ -0.68
RFFL-201ENST00000315249 TRAV13-1A0A0B4J241 112 aa10.78□□□□□ -0.68
RFFL-201ENST00000315249 ADMP35318 185 aa10.78□□□□□ -0.68
RFFL-201ENST00000315249 C10orf105Q8TEF2 133 aa10.78□□□□□ -0.68
RFFL-201ENST00000315249 SHANK2-AS3Q9BTD1 123 aa10.78□□□□□ -0.68
RFFL-201ENST00000315249 GAGE10A6NGK3 116 aa10.78□□□□□ -0.68
RFFL-201ENST00000315249 NDUFA4O00483 81 aa10.78□□□□□ -0.68
RFFL-201ENST00000315249 LINC00614P0C842 121 aa10.78□□□□□ -0.68
RFFL-201ENST00000315249 TMEM86BQ8N661 226 aa10.78□□□□□ -0.68
RFFL-201ENST00000315249 GAGE12JA6NER3 117 aa10.77□□□□□ -0.68
RFFL-201ENST00000315249 FGF16O43320 207 aa10.77□□□□□ -0.68
RFFL-201ENST00000315249 SMIM13P0DJ93 91 aa10.77□□□□□ -0.68
RFFL-201ENST00000315249 GAGE1Q13065 139 aa10.77□□□□□ -0.68
RFFL-201ENST00000315249 GAGE4Q13068 117 aa10.77□□□□□ -0.68
RFFL-201ENST00000315249 GAGE5Q13069 117 aa10.77□□□□□ -0.68
RFFL-201ENST00000315249 GAGE13Q4V321 117 aa10.77□□□□□ -0.68
RFFL-201ENST00000315249 KAAG1Q9UBP8 84 aa10.77□□□□□ -0.68
RFFL-201ENST00000315249 PET117Q6UWS5 81 aa10.77□□□□□ -0.68
RFFL-201ENST00000315249 DERL1Q9BUN8 251 aa10.77□□□□□ -0.68
RFFL-201ENST00000315249 AMBPP02760 352 aa10.77□□□□□ -0.69
RFFL-201ENST00000315249 ZNF134P52741 427 aa10.77□□□□□ -0.69
RFFL-201ENST00000315249 LAGE3Q14657 143 aa10.77□□□□□ -0.69
RFFL-201ENST00000315249 ZNF843Q8N446 348 aa10.77□□□□□ -0.69
RFFL-201ENST00000315249 TRAV2A0A0B4J234 112 aa10.77□□□□□ -0.69
RFFL-201ENST00000315249 TMEM158Q8WZ71 300 aa10.77□□□□□ -0.69
RFFL-201ENST00000315249 CSTL1Q9H114 145 aa10.77□□□□□ -0.69
RFFL-201ENST00000315249 ANKHD1Q8IWZ3 2542 aaKnown RBP10.77□□□□□ -0.69
RFFL-201ENST00000315249 CST9LQ9H4G1 147 aa10.77□□□□□ -0.69
RFFL-201ENST00000315249 CGB7P0DN87 165 aa10.77□□□□□ -0.69
RFFL-201ENST00000315249 C6orf226Q5I0X4 101 aa10.77□□□□□ -0.69
RFFL-201ENST00000315249 CENPVL3A0A0U1RRI6 287 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 D6R8Y8 96 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 HBDP02042 147 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 HOXD3P31249 432 aaPredicted RBP10.76□□□□□ -0.69
RFFL-201ENST00000315249 C9orf66Q5T8R8 295 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 PIEZO2Q9H5I5 2752 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 WISP2O76076 250 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 SRSF3P84103 164 aaKnown RBP10.76□□□□□ -0.69
RFFL-201ENST00000315249 SS18Q15532 418 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 LYPD1Q8N2G4 141 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 SLURP1P55000 103 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 LINC00311Q8N616 119 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 C15orf65H3BRN8 121 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 BLCAPP62952 87 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 COL5A1-AS1Q5SY13 56 aa10.76□□□□□ -0.69
RFFL-201ENST00000315249 MRPL27Q9P0M9 148 aaKnown RBP10.76□□□□□ -0.69
RFFL-201ENST00000315249 CD300EQ496F6 205 aaPredicted RBP10.75□□□□□ -0.69
RFFL-201ENST00000315249 IGF2BP2-AS1Q96M15 143 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 JPT2Q9H910 190 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 ARMS2P0C7Q2 107 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 SEM1Q6ZVN7 128 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 MBD3L1Q8WWY6 194 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 LINC00479Q96M42 142 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 TRAV9-1A0A075B6T8 112 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 ZNF815PA8K554 130 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 DAZAP2Q15038 168 aaPredicted RBP10.75□□□□□ -0.69
RFFL-201ENST00000315249 TEX43Q6ZNM6 134 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 LIME1Q9H400 295 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 DPM2O94777 84 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 TTC9CQ8N5M4 171 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 VOPP1Q96AW1 172 aa10.75□□□□□ -0.69
RFFL-201ENST00000315249 VCYO14598 125 aa10.74□□□□□ -0.69
RFFL-201ENST00000315249 IFITM2Q01629 132 aa10.74□□□□□ -0.69
RFFL-201ENST00000315249 YPEL3P61236 119 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms