RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TRBV19A0A075B6N1 114 aa10.37□□□□□ -0.75
PPP1CA-201ENST00000312989 DEFB131BA0A096LNP1 70 aa10.37□□□□□ -0.75
PPP1CA-201ENST00000312989 ZNF253O75346 499 aa10.37□□□□□ -0.75
PPP1CA-201ENST00000312989 INSP01308 110 aa10.37□□□□□ -0.75
PPP1CA-201ENST00000312989 HBE1P02100 147 aa10.37□□□□□ -0.75
PPP1CA-201ENST00000312989 SPART-AS1P0CW21 52 aa10.37□□□□□ -0.75
PPP1CA-201ENST00000312989 PYYP10082 97 aa10.37□□□□□ -0.75
PPP1CA-201ENST00000312989 AZU1P20160 251 aa10.37□□□□□ -0.75
PPP1CA-201ENST00000312989 EMP1P54849 157 aa10.37□□□□□ -0.75
PPP1CA-201ENST00000312989 CLINT1Q14677 625 aa10.37□□□□□ -0.75
PPP1CA-201ENST00000312989 SLC25A2Q9BXI2 301 aa10.37□□□□□ -0.75
PPP1CA-201ENST00000312989 SLC25A31Q9H0C2 315 aa10.37□□□□□ -0.75
PPP1CA-201ENST00000312989 ZNF705GA8MUZ8 300 aaPredicted RBP10.36□□□□□ -0.75
PPP1CA-201ENST00000312989 TSPOP30536 169 aa10.36□□□□□ -0.75
PPP1CA-201ENST00000312989 GUK1Q16774 197 aa10.36□□□□□ -0.75
PPP1CA-201ENST00000312989 RRN3P1Q2M238 152 aa10.36□□□□□ -0.75
PPP1CA-201ENST00000312989 ALG5Q9Y673 324 aa10.36□□□□□ -0.75
PPP1CA-201ENST00000312989 NPIPB6E9PJ23 425 aa10.35□□□□□ -0.75
PPP1CA-201ENST00000312989 M0R3E3 92 aa10.35□□□□□ -0.75
PPP1CA-201ENST00000312989 SSNA1O43805 119 aa10.35□□□□□ -0.75
PPP1CA-201ENST00000312989 RLN2P04090 185 aa10.35□□□□□ -0.75
PPP1CA-201ENST00000312989 OXA1LQ15070 435 aa10.35□□□□□ -0.75
PPP1CA-201ENST00000312989 MIR17HGQ75NE6 70 aa10.35□□□□□ -0.75
PPP1CA-201ENST00000312989 LRRC20Q8TCA0 184 aa10.35□□□□□ -0.75
PPP1CA-201ENST00000312989 ZNF503Q96F45 646 aa10.35□□□□□ -0.75
PPP1CA-201ENST00000312989 ATP5SQ99766 215 aa10.35□□□□□ -0.75
PPP1CA-201ENST00000312989 WFDC1Q9HC57 220 aa10.35□□□□□ -0.75
PPP1CA-201ENST00000312989 MBD2Q9UBB5 411 aa10.35□□□□□ -0.75
PPP1CA-201ENST00000312989 HSPB11Q9Y547 144 aa10.35□□□□□ -0.75
PPP1CA-201ENST00000312989 CT45A10P0DMU9 189 aa10.34□□□□□ -0.75
PPP1CA-201ENST00000312989 HIST1H1EP10412 219 aaKnown RBP10.34□□□□□ -0.75
PPP1CA-201ENST00000312989 CDKN1BP46527 198 aa10.34□□□□□ -0.75
PPP1CA-201ENST00000312989 GFI1BQ5VTD9 330 aa10.34□□□□□ -0.75
PPP1CA-201ENST00000312989 MRPL53Q96EL3 112 aaKnown RBP10.34□□□□□ -0.75
PPP1CA-201ENST00000312989 FAM19A4Q96LR4 140 aa10.34□□□□□ -0.75
PPP1CA-201ENST00000312989 NIPSNAP3BQ9BS92 247 aa10.34□□□□□ -0.75
PPP1CA-201ENST00000312989 PTTG1O95997 202 aa10.33□□□□□ -0.76
PPP1CA-201ENST00000312989 RHOBP62745 196 aa10.33□□□□□ -0.76
PPP1CA-201ENST00000312989 PDE6HQ13956 83 aa10.33□□□□□ -0.76
PPP1CA-201ENST00000312989 RNASE8Q8TDE3 154 aaKnown RBP10.33□□□□□ -0.76
PPP1CA-201ENST00000312989 FXYD5Q96DB9 178 aa10.33□□□□□ -0.76
PPP1CA-201ENST00000312989 ODF3Q96PU9 254 aa10.33□□□□□ -0.76
PPP1CA-201ENST00000312989 TEX48A0A1B0GUV7 120 aa10.32□□□□□ -0.76
PPP1CA-201ENST00000312989 RPL12P30050 165 aaKnown RBP10.32□□□□□ -0.76
PPP1CA-201ENST00000312989 EXOC3-AS1Q8N2X6 119 aa10.32□□□□□ -0.76
PPP1CA-201ENST00000312989 TMEM208Q9BTX3 173 aa10.32□□□□□ -0.76
PPP1CA-201ENST00000312989 TAS2R60P59551 318 aa10.31□□□□□ -0.76
PPP1CA-201ENST00000312989 TMEM256Q8N2U0 113 aa10.31□□□□□ -0.76
PPP1CA-201ENST00000312989 FUT9Q9Y231 359 aa10.31□□□□□ -0.76
PPP1CA-201ENST00000312989 LYRM9A8MSI8 78 aa10.3□□□□□ -0.76
PPP1CA-201ENST00000312989 PET100P0DJ07 73 aa10.3□□□□□ -0.76
PPP1CA-201ENST00000312989 ERCC8Q13216 396 aa10.3□□□□□ -0.76
PPP1CA-201ENST00000312989 FCN2Q15485 313 aa10.3□□□□□ -0.76
PPP1CA-201ENST00000312989 Q5BKY6 102 aa10.3□□□□□ -0.76
PPP1CA-201ENST00000312989 PHYHIPLQ96FC7 376 aa10.3□□□□□ -0.76
PPP1CA-201ENST00000312989 C20orf144Q9BQM9 153 aa10.3□□□□□ -0.76
PPP1CA-201ENST00000312989 MRPL32Q9BYC8 188 aaKnown RBP10.3□□□□□ -0.76
PPP1CA-201ENST00000312989 SMIM3Q9BZL3 60 aa10.3□□□□□ -0.76
PPP1CA-201ENST00000312989 DYNC1H1Q14204 4646 aaKnown RBP10.3□□□□□ -0.76
PPP1CA-201ENST00000312989 KLLNB2CW77 178 aa10.29□□□□□ -0.76
PPP1CA-201ENST00000312989 LINC00612Q8N6U2 182 aa10.29□□□□□ -0.76
PPP1CA-201ENST00000312989 OR10J6PQ8NGY7 276 aa10.29□□□□□ -0.76
PPP1CA-201ENST00000312989 LINC01587Q99440 93 aa10.29□□□□□ -0.76
PPP1CA-201ENST00000312989 AGPAT4-IT1Q9H0P7 198 aa10.29□□□□□ -0.76
PPP1CA-201ENST00000312989 HERC2O95714 4834 aa10.29□□□□□ -0.76
PPP1CA-201ENST00000312989 H7BYZ3 331 aa10.28□□□□□ -0.76
PPP1CA-201ENST00000312989 EIF3GO75821 320 aaKnown RBP eCLIP10.28□□□□□ -0.76
PPP1CA-201ENST00000312989 NBEAP1P0C6P0 100 aa10.28□□□□□ -0.76
PPP1CA-201ENST00000312989 BLNKQ8WV28 456 aa10.28□□□□□ -0.76
PPP1CA-201ENST00000312989 FAM210BQ96KR6 192 aa10.28□□□□□ -0.76
PPP1CA-201ENST00000312989 NDUFAF3Q9BU61 184 aa10.28□□□□□ -0.76
PPP1CA-201ENST00000312989 OR51M1Q9H341 326 aa10.28□□□□□ -0.76
PPP1CA-201ENST00000312989 KCNIP2Q9NS61 270 aa10.28□□□□□ -0.76
PPP1CA-201ENST00000312989 OR10J4P0C629 311 aa10.27□□□□□ -0.76
PPP1CA-201ENST00000312989 DAD1P61803 113 aa10.27□□□□□ -0.76
PPP1CA-201ENST00000312989 ICAM4Q14773 271 aa10.27□□□□□ -0.76
PPP1CA-201ENST00000312989 PRR9Q5T870 116 aa10.27□□□□□ -0.76
PPP1CA-201ENST00000312989 C9orf47Q6ZRZ4 202 aa10.27□□□□□ -0.76
PPP1CA-201ENST00000312989 TMEM263Q8WUH6 116 aaKnown RBP10.27□□□□□ -0.76
PPP1CA-201ENST00000312989 RNF141Q8WVD5 230 aa10.27□□□□□ -0.76
PPP1CA-201ENST00000312989 C16orf74Q96GX8 76 aa10.27□□□□□ -0.76
PPP1CA-201ENST00000312989 PRELID1Q9Y255 219 aa10.27□□□□□ -0.76
PPP1CA-201ENST00000312989 DNAH11Q96DT5 4516 aa10.27□□□□□ -0.77
PPP1CA-201ENST00000312989 PKD1P98161 4303 aa10.27□□□□□ -0.77
PPP1CA-201ENST00000312989 IGKV2-40A0A087WW87 121 aaPredicted RBP10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 C17orf112F2Z3M2 114 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 G3V3Q6 166 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 ZNF324O75467 553 aaPredicted RBP10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 IGKV2D-40P01614 121 aaPredicted RBP10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 CRISP2P16562 243 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 FFAR4Q5NUL3 377 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 TMEM88Q6PEY1 159 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 Q6ZQT7 251 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 ZFAND2AQ8N6M9 145 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 VGLL1Q99990 258 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 PAXXQ9BUH6 204 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 PPP1R14DQ9NXH3 145 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 TIMM9Q9Y5J7 89 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 PKHD1P08F94 4074 aa10.26□□□□□ -0.77
PPP1CA-201ENST00000312989 J3KRW8 73 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms