RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 NPFFO15130 113 aa9□□□□□ -0.97
PTPN2-201ENST00000309660 LINC00173Q6ZV60 143 aa9□□□□□ -0.97
PTPN2-201ENST00000309660 RNF182Q8N6D2 247 aa9□□□□□ -0.97
PTPN2-201ENST00000309660 Q8N976 141 aa9□□□□□ -0.97
PTPN2-201ENST00000309660 OR4B1Q8NGF8 309 aa9□□□□□ -0.97
PTPN2-201ENST00000309660 TRAV40A0A0B4J280 105 aa9□□□□□ -0.97
PTPN2-201ENST00000309660 MRPS12O15235 138 aaKnown RBP9□□□□□ -0.97
PTPN2-201ENST00000309660 VGLL1Q99990 258 aa9□□□□□ -0.97
PTPN2-201ENST00000309660 C2orf88Q9BSF0 95 aa9□□□□□ -0.97
PTPN2-201ENST00000309660 SELENOKQ9Y6D0 94 aa9□□□□□ -0.97
PTPN2-201ENST00000309660 LOC389332A0A1B0GUA5 103 aa9□□□□□ -0.97
PTPN2-201ENST00000309660 TMEM189A5PLL7 270 aa9□□□□□ -0.97
PTPN2-201ENST00000309660 IGHV4-39P01824 125 aa9□□□□□ -0.97
PTPN2-201ENST00000309660 LOC102724200A0A096LPH7 203 aaPredicted RBP8.99□□□□□ -0.97
PTPN2-201ENST00000309660 Q6ZN92 141 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 LYPD1Q8N2G4 141 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 VPS13CQ709C8 3753 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 TMEM213A2RRL7 107 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 SFTPCP11686 197 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 ERCC8Q13216 396 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 RIGQ13278 110 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 URB1-AS1Q96HZ7 61 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 PMCHL2Q9BQD1 86 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 C20orf144Q9BQM9 153 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 GFRA4Q9GZZ7 299 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 SOX21Q9Y651 276 aaPredicted RBP8.99□□□□□ -0.97
PTPN2-201ENST00000309660 ZFHX3Q15911 3703 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 CENPVL3A0A0U1RRI6 287 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 SH2D1AO60880 128 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 ORM1P02763 201 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 BTF3P20290 206 aaKnown RBP8.99□□□□□ -0.97
PTPN2-201ENST00000309660 PSG9Q00887 426 aa8.99□□□□□ -0.97
PTPN2-201ENST00000309660 DOPEY2Q9Y3R5 2298 aa8.98□□□□□ -0.97
PTPN2-201ENST00000309660 UTP20O75691 2785 aaKnown RBP8.98□□□□□ -0.97
PTPN2-201ENST00000309660 NPIPB6E9PJ23 425 aa8.98□□□□□ -0.97
PTPN2-201ENST00000309660 LEPROTL1O95214 131 aa8.98□□□□□ -0.97
PTPN2-201ENST00000309660 LINC00614P0C842 121 aa8.98□□□□□ -0.97
PTPN2-201ENST00000309660 EBI3Q14213 229 aa8.98□□□□□ -0.97
PTPN2-201ENST00000309660 LYZL1Q6UWQ5 148 aa8.98□□□□□ -0.97
PTPN2-201ENST00000309660 TCAPO15273 167 aa8.98□□□□□ -0.97
PTPN2-201ENST00000309660 KLF5Q13887 457 aaPredicted RBP8.98□□□□□ -0.97
PTPN2-201ENST00000309660 PRORYQ9H606 182 aa8.98□□□□□ -0.97
PTPN2-201ENST00000309660 IGHV1-24A0A0C4DH33 117 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 IGHV4-61A0A0C4DH41 118 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 GOSR1O95249 250 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 PPIFP30405 207 aaKnown RBP8.97□□□□□ -0.97
PTPN2-201ENST00000309660 PDE6HQ13956 83 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 LBHQ53QV2 105 aaPredicted RBP8.97□□□□□ -0.97
PTPN2-201ENST00000309660 PRSS3P2Q8NHM4 247 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 SMAD5-AS1Q9Y6J3 95 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 IGKV3-7A0A075B6H7 116 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 HNRNPA3P51991 378 aaKnown RBP8.97□□□□□ -0.97
PTPN2-201ENST00000309660 FAM110DQ8TAY7 271 aaPredicted RBP8.97□□□□□ -0.97
PTPN2-201ENST00000309660 LRRK2Q5S007 2527 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 PRAC2D3DTV9 90 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 J3KRW8 73 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 APOHP02749 345 aaPredicted RBP8.97□□□□□ -0.97
PTPN2-201ENST00000309660 TFPI2P48307 235 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 FXYD7P58549 80 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 FAM162BQ5T6X4 162 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 CCL19Q99731 98 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 TMEM70Q9BUB7 260 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 CREBBPQ92793 2442 aa8.97□□□□□ -0.97
PTPN2-201ENST00000309660 ABCA2Q9BZC7 2435 aa8.96□□□□□ -0.97
PTPN2-201ENST00000309660 HAX1O00165 279 aa8.96□□□□□ -0.97
PTPN2-201ENST00000309660 RAB4AP20338 218 aa8.96□□□□□ -0.97
PTPN2-201ENST00000309660 ATP5J2P56134 94 aa8.96□□□□□ -0.97
PTPN2-201ENST00000309660 AMN1Q8IY45 258 aa8.96□□□□□ -0.97
PTPN2-201ENST00000309660 ZNF502Q8TBZ5 544 aa8.96□□□□□ -0.97
PTPN2-201ENST00000309660 AJUBAQ96IF1 538 aa8.96□□□□□ -0.97
PTPN2-201ENST00000309660 PRR25Q96S07 402 aa8.96□□□□□ -0.97
PTPN2-201ENST00000309660 TP73-AS1Q9UF72 201 aa8.96□□□□□ -0.97
PTPN2-201ENST00000309660 FAM231BA6NCW3 169 aa8.96□□□□□ -0.98
PTPN2-201ENST00000309660 NUTF2P61970 127 aaKnown RBP8.96□□□□□ -0.98
PTPN2-201ENST00000309660 TWIST1Q15672 202 aa8.96□□□□□ -0.98
PTPN2-201ENST00000309660 IGSF10Q6WRI0 2623 aa8.96□□□□□ -0.98
PTPN2-201ENST00000309660 ZNF80P51504 273 aaPredicted RBP8.96□□□□□ -0.98
PTPN2-201ENST00000309660 SPATA12Q7Z6I5 190 aa8.96□□□□□ -0.98
PTPN2-201ENST00000309660 NRGNQ92686 78 aa8.96□□□□□ -0.98
PTPN2-201ENST00000309660 CCDC140Q96MF4 163 aa8.96□□□□□ -0.98
PTPN2-201ENST00000309660 CELSR2Q9HCU4 2923 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 IGHV3-11P01762 117 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 FA2HQ7L5A8 372 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 DOPEY1Q5JWR5 2465 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 C2orf70A6NJV1 201 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 D6R8Y8 96 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 SMKR1H3BMG3 65 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 LCNL1Q6ZST4 164 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 EEF1AKMT3Q96AZ1 226 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 ZNF48Q96MX3 618 aaPredicted RBP8.95□□□□□ -0.98
PTPN2-201ENST00000309660 NDFIP1Q9BT67 221 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 UQCR10Q9UDW1 63 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 OR4C46A6NHA9 309 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 TRGV3P03979 118 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 IGLC3P0DOY3 106 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 IGHV4-38-2P0DP08 117 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 ZNF25P17030 456 aaPredicted RBP8.95□□□□□ -0.98
PTPN2-201ENST00000309660 TCTAP57738 103 aa8.95□□□□□ -0.98
PTPN2-201ENST00000309660 RPL11P62913 178 aaKnown RBP8.95□□□□□ -0.98
PTPN2-201ENST00000309660 SAPCD1Q5SSQ6 148 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms