RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 TMEM238LA0A1B0GVL6 79 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 A6NJY4 79 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 H3BRN7 92 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 NCR2O95944 276 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 FAM120AOSQ5T036 256 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 JMJD8Q96S16 334 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 V9GYV3 84 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 PROP1O75360 226 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 HOXB4P17483 251 aaPredicted RBP9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 RPL24P83731 157 aaKnown RBP9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 Q5PR19 223 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 RITA1Q96K30 269 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 GFRA4Q9GZZ7 299 aa9.07□□□□□ -0.96
PCDHGC3-201ENST00000308177 FCN3O75636 299 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 ZNF491Q8N8L2 437 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 ANKRD11Q6UB99 2663 aaPredicted RBP9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 TCF21O43680 179 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 CGB3P0DN86 165 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 CGB7P0DN87 165 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 ERCC8Q13216 396 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 IGFBPL1Q8WX77 278 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 MRPL27Q9P0M9 148 aaKnown RBP9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 CHD3Q12873 2000 aaKnown RBP9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 IGLV1-47P01700 117 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 LGALS3P17931 250 aaKnown RBP9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 SRSF1Q07955 248 aaKnown RBP eCLIP9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 CT83Q5H943 113 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 TMEM170BQ5T4T1 132 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 FAM231DQ6ZW35 169 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 STHQ8IWL8 128 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 TTC9CQ8N5M4 171 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 ST20Q9HBF5 79 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 CCDC168Q8NDH2 2452 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 FAM231BA6NCW3 169 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 NDUFS6O75380 124 aaKnown RBP9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 RAB37Q96AX2 223 aa9.06□□□□□ -0.96
PCDHGC3-201ENST00000308177 ARMS2P0C7Q2 107 aa9.05□□□□□ -0.96
PCDHGC3-201ENST00000308177 C19orf54Q5BKX5 351 aa9.05□□□□□ -0.96
PCDHGC3-201ENST00000308177 RNF182Q8N6D2 247 aa9.05□□□□□ -0.96
PCDHGC3-201ENST00000308177 C1orf194Q5T5A4 169 aa9.05□□□□□ -0.96
PCDHGC3-201ENST00000308177 IFI27L1Q96BM0 104 aa9.05□□□□□ -0.96
PCDHGC3-201ENST00000308177 SNCGO76070 127 aa9.05□□□□□ -0.96
PCDHGC3-201ENST00000308177 GEMIN7Q9H840 131 aaKnown RBP9.05□□□□□ -0.96
PCDHGC3-201ENST00000308177 NAV2Q8IVL1 2488 aa9.05□□□□□ -0.96
PCDHGC3-201ENST00000308177 FAM181BA6NEQ2 426 aa9.05□□□□□ -0.96
PCDHGC3-201ENST00000308177 GAGE10A6NGK3 116 aa9.05□□□□□ -0.96
PCDHGC3-201ENST00000308177 BEX4Q9NWD9 120 aaPredicted RBP9.05□□□□□ -0.96
PCDHGC3-201ENST00000308177 PRSS2P07478 247 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 P0C879 139 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 SYNJ2BPP57105 145 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 Q0VG73 95 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 TRGV11A0A075B6L2 103 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 A0A1B0GUS0 222 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 RPL13AP40429 203 aaKnown RBP9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 AMN1Q8IY45 258 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 JKAMPQ9P055 326 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 IGHV4-61A0A0C4DH41 118 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 C3orf79P0CE67 100 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 BRWD1-AS2P59051 145 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 ORMDL2Q53FV1 153 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 LAMTOR2Q9Y2Q5 125 aa9.04□□□□□ -0.96
PCDHGC3-201ENST00000308177 FABP2P12104 132 aa9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 ERASQ7Z444 233 aa9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 ARHGAP21Q5T5U3 1957 aa9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 TRAV12-3A0A0B4J271 114 aa9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 DTX2Q86UW9 622 aa9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 LOC102724200A0A096LPH7 203 aaPredicted RBP9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 LCNL1Q6ZST4 164 aa9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 IL17RELQ6ZVW7 336 aa9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 C8orf49Q96NF6 230 aa9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 CENPVL3A0A0U1RRI6 287 aa9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 IGHV4-39P01824 125 aa9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 NPBQ8NG41 125 aa9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 PRR25Q96S07 402 aa9.03□□□□□ -0.96
PCDHGC3-201ENST00000308177 J3QLI3 93 aa9.02□□□□□ -0.96
PCDHGC3-201ENST00000308177 KLHL30-AS1Q8NEE0 82 aa9.02□□□□□ -0.96
PCDHGC3-201ENST00000308177 Q96MF0 132 aa9.02□□□□□ -0.96
PCDHGC3-201ENST00000308177 NDUFA3O95167 84 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 IGKV1-17P01599 117 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 IGLV2-23P01705 113 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 LINC00574Q9H8X3 128 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 CYSLTR1Q9Y271 337 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 KMT2EQ8IZD2 1858 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 K7EIM0 57 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 K7EN84 100 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 NDUFA4O00483 81 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 UTF1Q5T230 341 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 C18orf32Q8TCD1 76 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 E7EUB6 86 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 I3L2K1 104 aa9.02□□□□□ -0.97
PCDHGC3-201ENST00000308177 TRGV2A0A075B6R0 118 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 IGHV7-81A0A0B4J1V7 117 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 SMIM27A0A1W2PRY6 76 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 Q8N7P7 452 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 IGKV1OR2-108A0A075B7D4 117 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 LOC107984156A0A0G2JMH3 177 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 PLXNB1O43157 2135 aa9.01□□□□□ -0.97
PCDHGC3-201ENST00000308177 DAZAP2Q15038 168 aaPredicted RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms