RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 UNQ9165/PRO28630Q6UXU0 137 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 TMEM183AQ8IXX5 376 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 BIN3Q9NQY0 253 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 ZNF492Q9P255 531 aa9.1□□□□□ -0.95
TRIM40-205ENST00000307859 TRAV8-1A0A0A6YYK1 113 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 ZNF207O43670 478 aaKnown RBP9.09□□□□□ -0.95
TRIM40-205ENST00000307859 ELANEP08246 267 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 MEOX2P50222 304 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 PSG3Q16557 428 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 RNF152Q8N8N0 203 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 GLMPQ8WWB7 406 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 SLC50A1Q9BRV3 221 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 PEF1Q9UBV8 284 aaKnown RBP9.09□□□□□ -0.95
TRIM40-205ENST00000307859 IGHV3-66A0A0C4DH42 116 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 SMIM27A0A1W2PRY6 76 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 C19orf71A6NCJ1 209 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 ZNF785A8K8V0 405 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 CSN1S1P47710 185 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 NUDT10Q8NFP7 164 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 NUDT11Q96G61 164 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 ZFP30Q9Y2G7 519 aa9.09□□□□□ -0.95
TRIM40-205ENST00000307859 IGHV3-49A0A0A0MS15 119 aa9.08□□□□□ -0.96
TRIM40-205ENST00000307859 FBLL1A6NHQ2 334 aaKnown RBP9.08□□□□□ -0.96
TRIM40-205ENST00000307859 ZNF705GA8MUZ8 300 aaPredicted RBP9.08□□□□□ -0.96
TRIM40-205ENST00000307859 GATCO43716 136 aaKnown RBP9.08□□□□□ -0.96
TRIM40-205ENST00000307859 SMUG1Q53HV7 270 aa9.08□□□□□ -0.96
TRIM40-205ENST00000307859 PRNTQ86SH4 94 aa9.08□□□□□ -0.96
TRIM40-205ENST00000307859 DUX5Q96PT3 197 aa9.08□□□□□ -0.96
TRIM40-205ENST00000307859 SERTAD4Q9NUC0 356 aa9.08□□□□□ -0.96
TRIM40-205ENST00000307859 PSG8Q9UQ74 426 aa9.08□□□□□ -0.96
TRIM40-205ENST00000307859 ANK3Q12955 4377 aaKnown RBP9.07□□□□□ -0.96
TRIM40-205ENST00000307859 IGHV3OR16-13A0A075B7E8 117 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 IGHV3-74A0A0B4J1X5 117 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 C5orf52A6NGY3 159 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 DNAJC9-AS1A6NH13 148 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 CHEK1O14757 476 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 HIST1H2BKO60814 126 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 RPLP1P05386 114 aaKnown RBP9.07□□□□□ -0.96
TRIM40-205ENST00000307859 HIST1H2BJP06899 126 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 HIST1H2BOP23527 126 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 HIST1H2BBP33778 126 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 HIST1H2BDP58876 126 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 HIST1H2BCP62807 126 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 HIST2H2BEQ16778 126 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 ACTL10Q5JWF8 245 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.07□□□□□ -0.96
TRIM40-205ENST00000307859 PRR27Q6MZM9 219 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 LINC00322Q6ZN03 302 aaPredicted RBP9.07□□□□□ -0.96
TRIM40-205ENST00000307859 GPHB5Q86YW7 130 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 FRZBQ92765 325 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 HIST1H2BHQ93079 126 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
TRIM40-205ENST00000307859 GRAMD2BQ96HH9 432 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 HIST1H2BNQ99877 126 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 HIST1H2BMQ99879 126 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 YAE1D1Q9NRH1 226 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 ANK2Q01484 3957 aa9.07□□□□□ -0.96
TRIM40-205ENST00000307859 A0A1W2PS18 150 aa9.06□□□□□ -0.96
TRIM40-205ENST00000307859 K7EMT4 169 aa9.06□□□□□ -0.96
TRIM40-205ENST00000307859 S100A6P06703 90 aa9.06□□□□□ -0.96
TRIM40-205ENST00000307859 LGALS1P09382 135 aaKnown RBP9.06□□□□□ -0.96
TRIM40-205ENST00000307859 HLA-DMBP28068 263 aa9.06□□□□□ -0.96
TRIM40-205ENST00000307859 CT83Q5H943 113 aa9.06□□□□□ -0.96
TRIM40-205ENST00000307859 C8orf86Q6ZUL3 223 aa9.06□□□□□ -0.96
TRIM40-205ENST00000307859 UBE2E2Q96LR5 201 aa9.06□□□□□ -0.96
TRIM40-205ENST00000307859 SAV1Q9H4B6 383 aaPredicted RBP9.06□□□□□ -0.96
TRIM40-205ENST00000307859 IGKV2-40A0A087WW87 121 aaPredicted RBP9.05□□□□□ -0.96
TRIM40-205ENST00000307859 TRAV8-2A0A0B4J237 113 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 NPIPB6E9PJ23 425 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 UBE2CO00762 179 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 IGKV2D-40P01614 121 aaPredicted RBP9.05□□□□□ -0.96
TRIM40-205ENST00000307859 TRGC1P0CF51 173 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 SNRPEP62304 92 aaKnown RBP9.05□□□□□ -0.96
TRIM40-205ENST00000307859 IGFL4Q6B9Z1 124 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 LCN12Q6JVE5 192 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 COX8CQ7Z4L0 72 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 GBGT1Q8N5D6 347 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 RPP21Q9H633 154 aaKnown RBP9.05□□□□□ -0.96
TRIM40-205ENST00000307859 DAZ1Q9NQZ3 744 aaKnown RBP9.05□□□□□ -0.96
TRIM40-205ENST00000307859 TMEM160Q9NX00 188 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 IGHV7-4-1A0A0J9YVY3 117 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 RBAKDNA6NC62 111 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 CA1P00915 261 aaPredicted RBP9.05□□□□□ -0.96
TRIM40-205ENST00000307859 FAM106AQ4KMX7 169 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 TSKUQ8WUA8 353 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 ZC2HC1AQ96GY0 325 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 CLEC5AQ9NY25 188 aa9.05□□□□□ -0.96
TRIM40-205ENST00000307859 IZUMO1RA6ND01 250 aa9.04□□□□□ -0.96
TRIM40-205ENST00000307859 ZNF705FA8MVS1 300 aaPredicted RBP9.04□□□□□ -0.96
TRIM40-205ENST00000307859 P01737 135 aa9.04□□□□□ -0.96
TRIM40-205ENST00000307859 TCL1AP56279 114 aa9.04□□□□□ -0.96
TRIM40-205ENST00000307859 RPL19P84098 196 aaKnown RBP9.04□□□□□ -0.96
TRIM40-205ENST00000307859 RNF182Q8N6D2 247 aa9.04□□□□□ -0.96
TRIM40-205ENST00000307859 OR4B1Q8NGF8 309 aa9.04□□□□□ -0.96
TRIM40-205ENST00000307859 ESM1Q9NQ30 184 aa9.04□□□□□ -0.96
TRIM40-205ENST00000307859 SMPXQ9UHP9 88 aa9.04□□□□□ -0.96
TRIM40-205ENST00000307859 FAM181BA6NEQ2 426 aa9.03□□□□□ -0.96
TRIM40-205ENST00000307859 SOCS3O14543 225 aa9.03□□□□□ -0.96
TRIM40-205ENST00000307859 SCGB2A2Q13296 93 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms